Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188526933

Identifier: 188526933

GI number: 188526933

Start: 125513

End: 126382

Strand: Direct

Name: 188526933

Synonym: HPSH_00650

Alternate gene names: NA

Gene position: 125513-126382 (Clockwise)

Preceding gene: 188526932

Following gene: 188526934

Centisome position: 7.8

GC content: 38.16

Gene sequence:

>870_bases
GTGAAACGGATTTTATTTTTTTTAGTAGCTACGACTTTTTTGTTGAGAGCAGAAACGGACTCTGCCACTATTAACACTAC
AATTGATCCCAATGTTATGTTTTCTGAAAGCTCCACAGGGAATGTGAAAAAAGACCGTAAAAGGGTTTTAAAGAGTATGG
TTAATTTGGAAAAAGAGCGCGTGAAGAATTTTAACCAGTATTCTGAAACCAAGATGAGTAAGGGCGACTTATCCGCTTTT
GGAGCTTTCTTTAAGGGGAGTTTGGAAAGTTGTGTGGATCAAAAGATTTGTTATTATGAGCATAAAAACGGCAAAGTTTC
TTTTGTGGTGAATGACAGAGAGAAATTTTATAAACATGTGCTTAAAGACTTAGGGACAGAGCTTTCACTCCCTTTGTTCA
ACTGGCTTTACAAAGGCTCGGATTTTGGGGCTTTGCATGAGCAGTTTGGGGATATGTATGATGGGTATATCAAATATTTG
ATCAGCATGGTTAGAGTAAGCCAAAAAGAAAAGGCTAGAAAACTGGATGCAGTCACTCTTAAAAAAATGGAAGATCAAGC
TGAGAAAGACACTAAGGCAGCGTTTCAAAAGAGGAGCAGTGGGGAGCTTGAAAGCCATACTGATAGCCCTGAATTTATAA
GCTCTTCTAAGAAAACACAGAACGCTTCTAATCCGGATCTAGATTCTACGACTAATGCTAACGCGCTCAAAGAAACAGCT
TCAAAAGAGCCAGAAATTTCTTCCAAAAAAGAGGAAAGGTCTAAGAAAAAACGCCGCCTTTCAAAGAAAGAAAGGCAACA
ACAAGCCTTGCAACAAGAGTTTGAAAGGCAAATTAGTGACTCTAGTAAGTCTGAAAATATAGCAAAATAG

Upstream 100 bases:

>100_bases
TCTAAGGTGGTTTTTTATCAATAGAAGAAATTTCAAAAGAGAGCTTATGAAGAACAGTGTCTATTTTTGTTGCGGTTATA
TAATTAATTAGGAGTTTGGT

Downstream 100 bases:

>100_bases
TTTAGCTTACCTTTTAGTAGGGGGCTTTAAATAAGTCTCTTAAGCACTCCTTTTTAGGCTTTATATTTAGGCTTTTAGCT
CTCTATCGCTCTGTCTTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MKRILFFLVATTFLLRAETDSATINTTIDPNVMFSESSTGNVKKDRKRVLKSMVNLEKERVKNFNQYSETKMSKGDLSAF
GAFFKGSLESCVDQKICYYEHKNGKVSFVVNDREKFYKHVLKDLGTELSLPLFNWLYKGSDFGALHEQFGDMYDGYIKYL
ISMVRVSQKEKARKLDAVTLKKMEDQAEKDTKAAFQKRSSGELESHTDSPEFISSSKKTQNASNPDLDSTTNANALKETA
SKEPEISSKKEERSKKKRRLSKKERQQQALQQEFERQISDSSKSENIAK

Sequences:

>Translated_289_residues
MKRILFFLVATTFLLRAETDSATINTTIDPNVMFSESSTGNVKKDRKRVLKSMVNLEKERVKNFNQYSETKMSKGDLSAF
GAFFKGSLESCVDQKICYYEHKNGKVSFVVNDREKFYKHVLKDLGTELSLPLFNWLYKGSDFGALHEQFGDMYDGYIKYL
ISMVRVSQKEKARKLDAVTLKKMEDQAEKDTKAAFQKRSSGELESHTDSPEFISSSKKTQNASNPDLDSTTNANALKETA
SKEPEISSKKEERSKKKRRLSKKERQQQALQQEFERQISDSSKSENIAK
>Mature_289_residues
MKRILFFLVATTFLLRAETDSATINTTIDPNVMFSESSTGNVKKDRKRVLKSMVNLEKERVKNFNQYSETKMSKGDLSAF
GAFFKGSLESCVDQKICYYEHKNGKVSFVVNDREKFYKHVLKDLGTELSLPLFNWLYKGSDFGALHEQFGDMYDGYIKYL
ISMVRVSQKEKARKLDAVTLKKMEDQAEKDTKAAFQKRSSGELESHTDSPEFISSSKKTQNASNPDLDSTTNANALKETA
SKEPEISSKKEERSKKKRRLSKKERQQQALQQEFERQISDSSKSENIAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33106; Mature: 33106

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILFFLVATTFLLRAETDSATINTTIDPNVMFSESSTGNVKKDRKRVLKSMVNLEKER
CHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHH
VKNFNQYSETKMSKGDLSAFGAFFKGSLESCVDQKICYYEHKNGKVSFVVNDREKFYKHV
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCHHHHHHHH
LKDLGTELSLPLFNWLYKGSDFGALHEQFGDMYDGYIKYLISMVRVSQKEKARKLDAVTL
HHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKMEDQAEKDTKAAFQKRSSGELESHTDSPEFISSSKKTQNASNPDLDSTTNANALKETA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHCCCCCCCCCCCCCCHHHHHHHH
SKEPEISSKKEERSKKKRRLSKKERQQQALQQEFERQISDSSKSENIAK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKRILFFLVATTFLLRAETDSATINTTIDPNVMFSESSTGNVKKDRKRVLKSMVNLEKER
CHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHH
VKNFNQYSETKMSKGDLSAFGAFFKGSLESCVDQKICYYEHKNGKVSFVVNDREKFYKHV
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCHHHHHHHH
LKDLGTELSLPLFNWLYKGSDFGALHEQFGDMYDGYIKYLISMVRVSQKEKARKLDAVTL
HHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKMEDQAEKDTKAAFQKRSSGELESHTDSPEFISSSKKTQNASNPDLDSTTNANALKETA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHCCCCCCCCCCCCCCHHHHHHHH
SKEPEISSKKEERSKKKRRLSKKERQQQALQQEFERQISDSSKSENIAK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA