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The map label for this gene is 188526894

Identifier: 188526894

GI number: 188526894

Start: 78661

End: 80034

Strand: Reverse

Name: 188526894

Synonym: HPSH_00430

Alternate gene names: NA

Gene position: 80034-78661 (Counterclockwise)

Preceding gene: 188526895

Following gene: 188526893

Centisome position: 4.98

GC content: 39.67

Gene sequence:

>1374_bases
ATGCGTTATTTTCTTGTAGTTTTCTTGTTTTTGTTTGTGGGTTGCATGCAAAAGAATTTCACGCTCAAAGATTTATCCTT
GCCCCAAGAGGCTTCAAGCTATCTTGCAGGCTCTCAAAATAGCAGTAACAATAACCAAAGCATTGACCCCCAAGCGTTAA
GAGAAAATCTAAAAGAGAGCTATCTCAAAGCGTGGTATTCCCCATGGCTAGACATGAAAGTCAAAAGCAATAAAAAAGAA
GTGTTTTGGATTCTTAAGGAGATGAATAAATCCACCGGTTATGGCGAAGATCTAAAACCCAACGCAAAAGCTTTCAATGA
TGAGCTTATTAAAAGCATGGATATTGAGCATTACCCTAGCGTTAAGATTAAGGCTGTTGTAGCGCGAGATAGCGATGTTA
GGGCTGTGCCTACTAACAAGCCTTTTTACCTCTCTCAAAAAGGCTACCCTTTTGACAGGTATCAAAATTCATTGATTTTT
CAAGGCACGCCGGTTTTAATCACGCATTTCAACACGGATAAAACTTACGCCCACATTCAAAGCAGTTTTGTTTATGGTTG
GATCAAAGTTAGCGATTTAGCTTACATGCATGATAAAGACATAGAGCTTTTAACCCATCTTAAAGATTATGTCATGCCTA
TAAAAGATAAAATCCCCCTTTATACAGACTATGGGGATTTTTACACCAATGCCAGAGTGGGCGAATTGTTCGCTCTCATC
CCCCAAAGCCAAAAAACACCTGAAAAACCCCCAAAAAAGGAATTGAAAGCCTATGGTTTTTTGAGGGACGCTAAGGGCTA
TGCAACTTTACAAAGCGTGATTTTAGAAGAAAAGGATTTTTTTGTTTTCCCTAAAGCTTTTAACAGCGAGAACATGGCGT
ATTTTATAGACACCATGCTAGGGCAAAAATACGGCTGGGGTGGGCTATTGGGCAATAGGGATTGCTCGGCTTTCACTAGG
GATAGTTTTGCTAATTTTGGTATTTTGCTCCCCAGAAATTCCTACGCGCAAAGCCGTTATGCGAACAATTATGTGGATTT
AAGCTCTATGAAAGCCAAAGAAAAAGAAGACTACATCCTTAAAAACGCCACGCCTTTTGGAACGCTCATCTATTTAAAAG
GGCATATCATGCTCTATTTAGGCACACACAACCACCAAGCGATAGTCGCTCACAGCATTTGGTCGGTGCAAACCCAAAAG
CATTTTAAAACCTTGAGCCATAAAATAGGAGGCGTGGTGATCACTTCATTATGGTTAGCAGAAGAACATAATGGGGCGTT
TTCTAAAAAGAAATTATTGATTGATAGGGTGCTTGGAATGAGCGATTTGAAAGATTTTGTCAATAAAACTTCAAGCCCCT
TGAATGCGAATTGA

Upstream 100 bases:

>100_bases
CGCCAGATTGAAAGCTCTGCGATTAAAAAATTGAGAAGCCCGCAATACGGGCGCATTTTAAGAAACTATTTGCGCATTTG
ATGTAAGGTTTTTCTAAAGC

Downstream 100 bases:

>100_bases
TTTTCTTATACTATGATTACGATTCATTAATTTAAAACATTTGGAGAAAGACAATGAGTATGGAATTTGATGCTGTCATT
ATTGGAGGTGGGGTTTCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein; Cell Wall-Associated Hydrolase; Cell Wall-Associated Hydrolases; Nlp/P60 Protein; NLP/P60 Family Lipoprotein; NlpC-P60 Family Protein; NlpC/P60 Family Protein; Cell Wall-Associated Hydrolase Protein; Lipoprotein NLP/P60 Family; DNA Gyrase Subunit A

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MRYFLVVFLFLFVGCMQKNFTLKDLSLPQEASSYLAGSQNSSNNNQSIDPQALRENLKESYLKAWYSPWLDMKVKSNKKE
VFWILKEMNKSTGYGEDLKPNAKAFNDELIKSMDIEHYPSVKIKAVVARDSDVRAVPTNKPFYLSQKGYPFDRYQNSLIF
QGTPVLITHFNTDKTYAHIQSSFVYGWIKVSDLAYMHDKDIELLTHLKDYVMPIKDKIPLYTDYGDFYTNARVGELFALI
PQSQKTPEKPPKKELKAYGFLRDAKGYATLQSVILEEKDFFVFPKAFNSENMAYFIDTMLGQKYGWGGLLGNRDCSAFTR
DSFANFGILLPRNSYAQSRYANNYVDLSSMKAKEKEDYILKNATPFGTLIYLKGHIMLYLGTHNHQAIVAHSIWSVQTQK
HFKTLSHKIGGVVITSLWLAEEHNGAFSKKKLLIDRVLGMSDLKDFVNKTSSPLNAN

Sequences:

>Translated_457_residues
MRYFLVVFLFLFVGCMQKNFTLKDLSLPQEASSYLAGSQNSSNNNQSIDPQALRENLKESYLKAWYSPWLDMKVKSNKKE
VFWILKEMNKSTGYGEDLKPNAKAFNDELIKSMDIEHYPSVKIKAVVARDSDVRAVPTNKPFYLSQKGYPFDRYQNSLIF
QGTPVLITHFNTDKTYAHIQSSFVYGWIKVSDLAYMHDKDIELLTHLKDYVMPIKDKIPLYTDYGDFYTNARVGELFALI
PQSQKTPEKPPKKELKAYGFLRDAKGYATLQSVILEEKDFFVFPKAFNSENMAYFIDTMLGQKYGWGGLLGNRDCSAFTR
DSFANFGILLPRNSYAQSRYANNYVDLSSMKAKEKEDYILKNATPFGTLIYLKGHIMLYLGTHNHQAIVAHSIWSVQTQK
HFKTLSHKIGGVVITSLWLAEEHNGAFSKKKLLIDRVLGMSDLKDFVNKTSSPLNAN
>Mature_457_residues
MRYFLVVFLFLFVGCMQKNFTLKDLSLPQEASSYLAGSQNSSNNNQSIDPQALRENLKESYLKAWYSPWLDMKVKSNKKE
VFWILKEMNKSTGYGEDLKPNAKAFNDELIKSMDIEHYPSVKIKAVVARDSDVRAVPTNKPFYLSQKGYPFDRYQNSLIF
QGTPVLITHFNTDKTYAHIQSSFVYGWIKVSDLAYMHDKDIELLTHLKDYVMPIKDKIPLYTDYGDFYTNARVGELFALI
PQSQKTPEKPPKKELKAYGFLRDAKGYATLQSVILEEKDFFVFPKAFNSENMAYFIDTMLGQKYGWGGLLGNRDCSAFTR
DSFANFGILLPRNSYAQSRYANNYVDLSSMKAKEKEDYILKNATPFGTLIYLKGHIMLYLGTHNHQAIVAHSIWSVQTQK
HFKTLSHKIGGVVITSLWLAEEHNGAFSKKKLLIDRVLGMSDLKDFVNKTSSPLNAN

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52374; Mature: 52374

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYFLVVFLFLFVGCMQKNFTLKDLSLPQEASSYLAGSQNSSNNNQSIDPQALRENLKES
CHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
YLKAWYSPWLDMKVKSNKKEVFWILKEMNKSTGYGEDLKPNAKAFNDELIKSMDIEHYPS
HHHHHHCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
VKIKAVVARDSDVRAVPTNKPFYLSQKGYPFDRYQNSLIFQGTPVLITHFNTDKTYAHIQ
EEEEEEEECCCCCEECCCCCCEEECCCCCCHHHHCCCEEEECCCEEEEEECCCCHHHHHH
SSFVYGWIKVSDLAYMHDKDIELLTHLKDYVMPIKDKIPLYTDYGDFYTNARVGELFALI
HCEEEEEEEECCEEEECCCCHHHHHHHHHHHCCCCCCCCEEECCCHHHCCCCHHHHHEEC
PQSQKTPEKPPKKELKAYGFLRDAKGYATLQSVILEEKDFFVFPKAFNSENMAYFIDTML
CCCCCCCCCCCHHHHHHHCCHHCCCHHHHHHHHHHCCCCCEEECCCCCCCCCEEHHHHHH
GQKYGWGGLLGNRDCSAFTRDSFANFGILLPRNSYAQSRYANNYVDLSSMKAKEKEDYIL
CCCCCCCCCCCCCCCCHHHHCCCCCCCEEECCCHHHHHHHCCCCEEHHHHCCCCCCCEEE
KNATPFGTLIYLKGHIMLYLGTHNHQAIVAHSIWSVQTQKHFKTLSHKIGGVVITSLWLA
ECCCCCEEEEEEECEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHCCEEEEHHHEE
EEHNGAFSKKKLLIDRVLGMSDLKDFVNKTSSPLNAN
CCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRYFLVVFLFLFVGCMQKNFTLKDLSLPQEASSYLAGSQNSSNNNQSIDPQALRENLKES
CHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
YLKAWYSPWLDMKVKSNKKEVFWILKEMNKSTGYGEDLKPNAKAFNDELIKSMDIEHYPS
HHHHHHCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
VKIKAVVARDSDVRAVPTNKPFYLSQKGYPFDRYQNSLIFQGTPVLITHFNTDKTYAHIQ
EEEEEEEECCCCCEECCCCCCEEECCCCCCHHHHCCCEEEECCCEEEEEECCCCHHHHHH
SSFVYGWIKVSDLAYMHDKDIELLTHLKDYVMPIKDKIPLYTDYGDFYTNARVGELFALI
HCEEEEEEEECCEEEECCCCHHHHHHHHHHHCCCCCCCCEEECCCHHHCCCCHHHHHEEC
PQSQKTPEKPPKKELKAYGFLRDAKGYATLQSVILEEKDFFVFPKAFNSENMAYFIDTML
CCCCCCCCCCCHHHHHHHCCHHCCCHHHHHHHHHHCCCCCEEECCCCCCCCCEEHHHHHH
GQKYGWGGLLGNRDCSAFTRDSFANFGILLPRNSYAQSRYANNYVDLSSMKAKEKEDYIL
CCCCCCCCCCCCCCCCHHHHCCCCCCCEEECCCHHHHHHHCCCCEEHHHHCCCCCCCEEE
KNATPFGTLIYLKGHIMLYLGTHNHQAIVAHSIWSVQTQKHFKTLSHKIGGVVITSLWLA
ECCCCCEEEEEEECEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHCCEEEEHHHEE
EEHNGAFSKKKLLIDRVLGMSDLKDFVNKTSSPLNAN
CCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA