| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is mqo [H]
Identifier: 188526893
GI number: 188526893
Start: 77255
End: 78601
Strand: Reverse
Name: mqo [H]
Synonym: HPSH_00425
Alternate gene names: 188526893
Gene position: 78601-77255 (Counterclockwise)
Preceding gene: 188526894
Following gene: 188526892
Centisome position: 4.89
GC content: 40.61
Gene sequence:
>1347_bases ATGGAATTTGATGCTGTCATTATTGGAGGTGGGGTTTCAGGGTGTGCGACCTTTTATACTTTGAGCGAATACAGCTCTTT AAAGCGTGTGGCTATCGTGGAAAAATGCTCTAAATTAGCTCAAATCAGCTCCAGCGCTAAAGCTAATTCACAAACCATTC ATGATGGCTCTATTGAAACGAATTACACTCCCGAAAAAGCTAAAAAAGTGCGTTTGAGCGCTTATAAAACCAGGCAATAC GCGCTCAATAAAGGCTTGCAAAATGAAGTGATTTTTGAAACCCAGAAAATGGCTATAGGCGTGGGCGATGAAGAATGCGA GTTCATGAAAAAACGCTACGAATCCTTTAAAGAAATCTTTGTGGGGTTAGAAGAATTTGACAAACAAAAGATTAAAGAAT TAGAGCCTAATGTGATTTTAGGGGCTAATGGCATAGACAGGCATGAAAACATTATCGGGCATGGGTATCAAAAAGATTGG AGTACGATGAATTTTGCGAAGTTGAGTGAAAACTTCGTTGAAGAAGCCCTAAAATTAAAGCCTAACAACCAGGTGTTTTT GGATTTCAAAGTGAAAAAGATTGAAAAACGCAACGACACTTACGCCGTAATTTCAGAAGACGCTGAAGAAGTGTATGCTA AATTCGTGCTAGTCAATGCGGGTTCTTACGCTTTGCCTTTGGCTCAGAGCATGGGTTATGGCTTGGATTTAGGGTGCTTG CCTGTGGCGGGCAGCTTTTATTTTGTGCCGGATTTATTAAGGGGTAAGGTTTATACCGTTCAAAACCCCAAGCTCCCTTT TGCAGCCGTGCATGGCGACCCTGATGCCGTCATTAAAGGAAAAACACGAATCGGGCCTACCGCTTTAACGATGCCTAAAT TAGAACGAAACAAATGCTGGCTTAAGGGCATTAGCTTGGAATTGTTGAAAATGGATTTGAATAAAGATGTGTTTAAGATT GCGTTTGATTTGATGAGCGATAAAGAAATCCGTAATTATGTGTTTAAAAACATGGTTTTTGAGTTGCCCATTATTGGTAA AAGGAAGTTTTTAAAAGACGCTCAAAAAATCATCCCCTCTCTTAGCCTAGAAGATTTAGAATACGCTCATGGTTTTGGCG AAGTGCGCCCGCAAGTTTTAGACAAAACCAAGCGAAAGCTGGAATTAGGCGAAAAAAAGATTTGCACCCATAAAGGCATC ACTTTTAACATGACCCCCTCTCCAGGTGCAACGAGTTGCTTGCAAAACGCCCTTGTGGATTCCCAAGAAATCGCTGCGTA TTTGGGCGAGAGCTTTGAATTAGAACGCTTTTATAAAGATTTATCCCCAGAAGAATTGGAAAATTAA
Upstream 100 bases:
>100_bases ATTTTGTCAATAAAACTTCAAGCCCCTTGAATGCGAATTGATTTTCTTATACTATGATTACGATTCATTAATTTAAAACA TTTGGAGAAAGACAATGAGT
Downstream 100 bases:
>100_bases AAACGCATGCAAAAAGAACAAGAAGCCCTAGAGATCGCTAAAAAAGCCGTTAAAATCGTGTTTTTTTTAGGGCTTGTGGT GGTGCTTTTGATGATGATAA
Product: malate:quinone oxidoreductase
Products: NA
Alternate protein names: MQO; Malate dehydrogenase [quinone] [H]
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MEFDAVIIGGGVSGCATFYTLSEYSSLKRVAIVEKCSKLAQISSSAKANSQTIHDGSIETNYTPEKAKKVRLSAYKTRQY ALNKGLQNEVIFETQKMAIGVGDEECEFMKKRYESFKEIFVGLEEFDKQKIKELEPNVILGANGIDRHENIIGHGYQKDW STMNFAKLSENFVEEALKLKPNNQVFLDFKVKKIEKRNDTYAVISEDAEEVYAKFVLVNAGSYALPLAQSMGYGLDLGCL PVAGSFYFVPDLLRGKVYTVQNPKLPFAAVHGDPDAVIKGKTRIGPTALTMPKLERNKCWLKGISLELLKMDLNKDVFKI AFDLMSDKEIRNYVFKNMVFELPIIGKRKFLKDAQKIIPSLSLEDLEYAHGFGEVRPQVLDKTKRKLELGEKKICTHKGI TFNMTPSPGATSCLQNALVDSQEIAAYLGESFELERFYKDLSPEELEN
Sequences:
>Translated_448_residues MEFDAVIIGGGVSGCATFYTLSEYSSLKRVAIVEKCSKLAQISSSAKANSQTIHDGSIETNYTPEKAKKVRLSAYKTRQY ALNKGLQNEVIFETQKMAIGVGDEECEFMKKRYESFKEIFVGLEEFDKQKIKELEPNVILGANGIDRHENIIGHGYQKDW STMNFAKLSENFVEEALKLKPNNQVFLDFKVKKIEKRNDTYAVISEDAEEVYAKFVLVNAGSYALPLAQSMGYGLDLGCL PVAGSFYFVPDLLRGKVYTVQNPKLPFAAVHGDPDAVIKGKTRIGPTALTMPKLERNKCWLKGISLELLKMDLNKDVFKI AFDLMSDKEIRNYVFKNMVFELPIIGKRKFLKDAQKIIPSLSLEDLEYAHGFGEVRPQVLDKTKRKLELGEKKICTHKGI TFNMTPSPGATSCLQNALVDSQEIAAYLGESFELERFYKDLSPEELEN >Mature_448_residues MEFDAVIIGGGVSGCATFYTLSEYSSLKRVAIVEKCSKLAQISSSAKANSQTIHDGSIETNYTPEKAKKVRLSAYKTRQY ALNKGLQNEVIFETQKMAIGVGDEECEFMKKRYESFKEIFVGLEEFDKQKIKELEPNVILGANGIDRHENIIGHGYQKDW STMNFAKLSENFVEEALKLKPNNQVFLDFKVKKIEKRNDTYAVISEDAEEVYAKFVLVNAGSYALPLAQSMGYGLDLGCL PVAGSFYFVPDLLRGKVYTVQNPKLPFAAVHGDPDAVIKGKTRIGPTALTMPKLERNKCWLKGISLELLKMDLNKDVFKI AFDLMSDKEIRNYVFKNMVFELPIIGKRKFLKDAQKIIPSLSLEDLEYAHGFGEVRPQVLDKTKRKLELGEKKICTHKGI TFNMTPSPGATSCLQNALVDSQEIAAYLGESFELERFYKDLSPEELEN
Specific function: Tricarboxylic acid cycle. [C]
COG id: COG0579
COG function: function code R; Predicted dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MQO family [H]
Homologues:
Organism=Escherichia coli, GI1788539, Length=456, Percent_Identity=24.5614035087719, Blast_Score=81, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006231 [H]
Pfam domain/function: PF06039 Mqo [H]
EC number: =1.1.5.4 [H]
Molecular weight: Translated: 50440; Mature: 50440
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFDAVIIGGGVSGCATFYTLSEYSSLKRVAIVEKCSKLAQISSSAKANSQTIHDGSIET CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCC NYTPEKAKKVRLSAYKTRQYALNKGLQNEVIFETQKMAIGVGDEECEFMKKRYESFKEIF CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHEEECCCHHHHHHHHHHHHHHHHH VGLEEFDKQKIKELEPNVILGANGIDRHENIIGHGYQKDWSTMNFAKLSENFVEEALKLK HHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC PNNQVFLDFKVKKIEKRNDTYAVISEDAEEVYAKFVLVNAGSYALPLAQSMGYGLDLGCL CCCEEEEEEEEEHHHCCCCCEEEECCCHHHHHHEEEEEECCCCHHHHHHHCCCCCCCCCH PVAGSFYFVPDLLRGKVYTVQNPKLPFAAVHGDPDAVIKGKTRIGPTALTMPKLERNKCW HCCCCEEECHHHHCCCEEEECCCCCCEEEECCCCCCEEECCCCCCCCEECCCCCCCCCHH LKGISLELLKMDLNKDVFKIAFDLMSDKEIRNYVFKNMVFELPIIGKRKFLKDAQKIIPS HCCCCCEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC LSLEDLEYAHGFGEVRPQVLDKTKRKLELGEKKICTHKGITFNMTPSPGATSCLQNALVD CCHHHHHHHCCHHHCCHHHHHHHHHHHHCCCHHHHEECCEEEEECCCCCHHHHHHHHHCC SQEIAAYLGESFELERFYKDLSPEELEN HHHHHHHHCCCCCHHHHHHCCCHHHHCC >Mature Secondary Structure MEFDAVIIGGGVSGCATFYTLSEYSSLKRVAIVEKCSKLAQISSSAKANSQTIHDGSIET CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCC NYTPEKAKKVRLSAYKTRQYALNKGLQNEVIFETQKMAIGVGDEECEFMKKRYESFKEIF CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHEEECCCHHHHHHHHHHHHHHHHH VGLEEFDKQKIKELEPNVILGANGIDRHENIIGHGYQKDWSTMNFAKLSENFVEEALKLK HHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC PNNQVFLDFKVKKIEKRNDTYAVISEDAEEVYAKFVLVNAGSYALPLAQSMGYGLDLGCL CCCEEEEEEEEEHHHCCCCCEEEECCCHHHHHHEEEEEECCCCHHHHHHHCCCCCCCCCH PVAGSFYFVPDLLRGKVYTVQNPKLPFAAVHGDPDAVIKGKTRIGPTALTMPKLERNKCW HCCCCEEECHHHHCCCEEEECCCCCCEEEECCCCCCEEECCCCCCCCEECCCCCCCCCHH LKGISLELLKMDLNKDVFKIAFDLMSDKEIRNYVFKNMVFELPIIGKRKFLKDAQKIIPS HCCCCCEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC LSLEDLEYAHGFGEVRPQVLDKTKRKLELGEKKICTHKGITFNMTPSPGATSCLQNALVD CCHHHHHHHCCHHHCCHHHHHHHHHHHHCCCHHHHEECCEEEEECCCCCHHHHHHHHHCC SQEIAAYLGESFELERFYKDLSPEELEN HHHHHHHHCCCCCHHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA