Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is mqo [H]

Identifier: 188526893

GI number: 188526893

Start: 77255

End: 78601

Strand: Reverse

Name: mqo [H]

Synonym: HPSH_00425

Alternate gene names: 188526893

Gene position: 78601-77255 (Counterclockwise)

Preceding gene: 188526894

Following gene: 188526892

Centisome position: 4.89

GC content: 40.61

Gene sequence:

>1347_bases
ATGGAATTTGATGCTGTCATTATTGGAGGTGGGGTTTCAGGGTGTGCGACCTTTTATACTTTGAGCGAATACAGCTCTTT
AAAGCGTGTGGCTATCGTGGAAAAATGCTCTAAATTAGCTCAAATCAGCTCCAGCGCTAAAGCTAATTCACAAACCATTC
ATGATGGCTCTATTGAAACGAATTACACTCCCGAAAAAGCTAAAAAAGTGCGTTTGAGCGCTTATAAAACCAGGCAATAC
GCGCTCAATAAAGGCTTGCAAAATGAAGTGATTTTTGAAACCCAGAAAATGGCTATAGGCGTGGGCGATGAAGAATGCGA
GTTCATGAAAAAACGCTACGAATCCTTTAAAGAAATCTTTGTGGGGTTAGAAGAATTTGACAAACAAAAGATTAAAGAAT
TAGAGCCTAATGTGATTTTAGGGGCTAATGGCATAGACAGGCATGAAAACATTATCGGGCATGGGTATCAAAAAGATTGG
AGTACGATGAATTTTGCGAAGTTGAGTGAAAACTTCGTTGAAGAAGCCCTAAAATTAAAGCCTAACAACCAGGTGTTTTT
GGATTTCAAAGTGAAAAAGATTGAAAAACGCAACGACACTTACGCCGTAATTTCAGAAGACGCTGAAGAAGTGTATGCTA
AATTCGTGCTAGTCAATGCGGGTTCTTACGCTTTGCCTTTGGCTCAGAGCATGGGTTATGGCTTGGATTTAGGGTGCTTG
CCTGTGGCGGGCAGCTTTTATTTTGTGCCGGATTTATTAAGGGGTAAGGTTTATACCGTTCAAAACCCCAAGCTCCCTTT
TGCAGCCGTGCATGGCGACCCTGATGCCGTCATTAAAGGAAAAACACGAATCGGGCCTACCGCTTTAACGATGCCTAAAT
TAGAACGAAACAAATGCTGGCTTAAGGGCATTAGCTTGGAATTGTTGAAAATGGATTTGAATAAAGATGTGTTTAAGATT
GCGTTTGATTTGATGAGCGATAAAGAAATCCGTAATTATGTGTTTAAAAACATGGTTTTTGAGTTGCCCATTATTGGTAA
AAGGAAGTTTTTAAAAGACGCTCAAAAAATCATCCCCTCTCTTAGCCTAGAAGATTTAGAATACGCTCATGGTTTTGGCG
AAGTGCGCCCGCAAGTTTTAGACAAAACCAAGCGAAAGCTGGAATTAGGCGAAAAAAAGATTTGCACCCATAAAGGCATC
ACTTTTAACATGACCCCCTCTCCAGGTGCAACGAGTTGCTTGCAAAACGCCCTTGTGGATTCCCAAGAAATCGCTGCGTA
TTTGGGCGAGAGCTTTGAATTAGAACGCTTTTATAAAGATTTATCCCCAGAAGAATTGGAAAATTAA

Upstream 100 bases:

>100_bases
ATTTTGTCAATAAAACTTCAAGCCCCTTGAATGCGAATTGATTTTCTTATACTATGATTACGATTCATTAATTTAAAACA
TTTGGAGAAAGACAATGAGT

Downstream 100 bases:

>100_bases
AAACGCATGCAAAAAGAACAAGAAGCCCTAGAGATCGCTAAAAAAGCCGTTAAAATCGTGTTTTTTTTAGGGCTTGTGGT
GGTGCTTTTGATGATGATAA

Product: malate:quinone oxidoreductase

Products: NA

Alternate protein names: MQO; Malate dehydrogenase [quinone] [H]

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MEFDAVIIGGGVSGCATFYTLSEYSSLKRVAIVEKCSKLAQISSSAKANSQTIHDGSIETNYTPEKAKKVRLSAYKTRQY
ALNKGLQNEVIFETQKMAIGVGDEECEFMKKRYESFKEIFVGLEEFDKQKIKELEPNVILGANGIDRHENIIGHGYQKDW
STMNFAKLSENFVEEALKLKPNNQVFLDFKVKKIEKRNDTYAVISEDAEEVYAKFVLVNAGSYALPLAQSMGYGLDLGCL
PVAGSFYFVPDLLRGKVYTVQNPKLPFAAVHGDPDAVIKGKTRIGPTALTMPKLERNKCWLKGISLELLKMDLNKDVFKI
AFDLMSDKEIRNYVFKNMVFELPIIGKRKFLKDAQKIIPSLSLEDLEYAHGFGEVRPQVLDKTKRKLELGEKKICTHKGI
TFNMTPSPGATSCLQNALVDSQEIAAYLGESFELERFYKDLSPEELEN

Sequences:

>Translated_448_residues
MEFDAVIIGGGVSGCATFYTLSEYSSLKRVAIVEKCSKLAQISSSAKANSQTIHDGSIETNYTPEKAKKVRLSAYKTRQY
ALNKGLQNEVIFETQKMAIGVGDEECEFMKKRYESFKEIFVGLEEFDKQKIKELEPNVILGANGIDRHENIIGHGYQKDW
STMNFAKLSENFVEEALKLKPNNQVFLDFKVKKIEKRNDTYAVISEDAEEVYAKFVLVNAGSYALPLAQSMGYGLDLGCL
PVAGSFYFVPDLLRGKVYTVQNPKLPFAAVHGDPDAVIKGKTRIGPTALTMPKLERNKCWLKGISLELLKMDLNKDVFKI
AFDLMSDKEIRNYVFKNMVFELPIIGKRKFLKDAQKIIPSLSLEDLEYAHGFGEVRPQVLDKTKRKLELGEKKICTHKGI
TFNMTPSPGATSCLQNALVDSQEIAAYLGESFELERFYKDLSPEELEN
>Mature_448_residues
MEFDAVIIGGGVSGCATFYTLSEYSSLKRVAIVEKCSKLAQISSSAKANSQTIHDGSIETNYTPEKAKKVRLSAYKTRQY
ALNKGLQNEVIFETQKMAIGVGDEECEFMKKRYESFKEIFVGLEEFDKQKIKELEPNVILGANGIDRHENIIGHGYQKDW
STMNFAKLSENFVEEALKLKPNNQVFLDFKVKKIEKRNDTYAVISEDAEEVYAKFVLVNAGSYALPLAQSMGYGLDLGCL
PVAGSFYFVPDLLRGKVYTVQNPKLPFAAVHGDPDAVIKGKTRIGPTALTMPKLERNKCWLKGISLELLKMDLNKDVFKI
AFDLMSDKEIRNYVFKNMVFELPIIGKRKFLKDAQKIIPSLSLEDLEYAHGFGEVRPQVLDKTKRKLELGEKKICTHKGI
TFNMTPSPGATSCLQNALVDSQEIAAYLGESFELERFYKDLSPEELEN

Specific function: Tricarboxylic acid cycle. [C]

COG id: COG0579

COG function: function code R; Predicted dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MQO family [H]

Homologues:

Organism=Escherichia coli, GI1788539, Length=456, Percent_Identity=24.5614035087719, Blast_Score=81, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006231 [H]

Pfam domain/function: PF06039 Mqo [H]

EC number: =1.1.5.4 [H]

Molecular weight: Translated: 50440; Mature: 50440

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFDAVIIGGGVSGCATFYTLSEYSSLKRVAIVEKCSKLAQISSSAKANSQTIHDGSIET
CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCC
NYTPEKAKKVRLSAYKTRQYALNKGLQNEVIFETQKMAIGVGDEECEFMKKRYESFKEIF
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHEEECCCHHHHHHHHHHHHHHHHH
VGLEEFDKQKIKELEPNVILGANGIDRHENIIGHGYQKDWSTMNFAKLSENFVEEALKLK
HHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC
PNNQVFLDFKVKKIEKRNDTYAVISEDAEEVYAKFVLVNAGSYALPLAQSMGYGLDLGCL
CCCEEEEEEEEEHHHCCCCCEEEECCCHHHHHHEEEEEECCCCHHHHHHHCCCCCCCCCH
PVAGSFYFVPDLLRGKVYTVQNPKLPFAAVHGDPDAVIKGKTRIGPTALTMPKLERNKCW
HCCCCEEECHHHHCCCEEEECCCCCCEEEECCCCCCEEECCCCCCCCEECCCCCCCCCHH
LKGISLELLKMDLNKDVFKIAFDLMSDKEIRNYVFKNMVFELPIIGKRKFLKDAQKIIPS
HCCCCCEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
LSLEDLEYAHGFGEVRPQVLDKTKRKLELGEKKICTHKGITFNMTPSPGATSCLQNALVD
CCHHHHHHHCCHHHCCHHHHHHHHHHHHCCCHHHHEECCEEEEECCCCCHHHHHHHHHCC
SQEIAAYLGESFELERFYKDLSPEELEN
HHHHHHHHCCCCCHHHHHHCCCHHHHCC
>Mature Secondary Structure
MEFDAVIIGGGVSGCATFYTLSEYSSLKRVAIVEKCSKLAQISSSAKANSQTIHDGSIET
CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCC
NYTPEKAKKVRLSAYKTRQYALNKGLQNEVIFETQKMAIGVGDEECEFMKKRYESFKEIF
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHEEECCCHHHHHHHHHHHHHHHHH
VGLEEFDKQKIKELEPNVILGANGIDRHENIIGHGYQKDWSTMNFAKLSENFVEEALKLK
HHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC
PNNQVFLDFKVKKIEKRNDTYAVISEDAEEVYAKFVLVNAGSYALPLAQSMGYGLDLGCL
CCCEEEEEEEEEHHHCCCCCEEEECCCHHHHHHEEEEEECCCCHHHHHHHCCCCCCCCCH
PVAGSFYFVPDLLRGKVYTVQNPKLPFAAVHGDPDAVIKGKTRIGPTALTMPKLERNKCW
HCCCCEEECHHHHCCCEEEECCCCCCEEEECCCCCCEEECCCCCCCCEECCCCCCCCCHH
LKGISLELLKMDLNKDVFKIAFDLMSDKEIRNYVFKNMVFELPIIGKRKFLKDAQKIIPS
HCCCCCEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
LSLEDLEYAHGFGEVRPQVLDKTKRKLELGEKKICTHKGITFNMTPSPGATSCLQNALVD
CCHHHHHHHCCHHHCCHHHHHHHHHHHHCCCHHHHEECCEEEEECCCCCHHHHHHHHHCC
SQEIAAYLGESFELERFYKDLSPEELEN
HHHHHHHHCCCCCHHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA