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The map label for this gene is 188526885

Identifier: 188526885

GI number: 188526885

Start: 70176

End: 71417

Strand: Direct

Name: 188526885

Synonym: HPSH_00385

Alternate gene names: NA

Gene position: 70176-71417 (Clockwise)

Preceding gene: 188526884

Following gene: 188526886

Centisome position: 4.36

GC content: 43.48

Gene sequence:

>1242_bases
ATGAACGCTACCGATTTAGAAACCCACGCAGCATTGCAAAAACCATCGCATGTTTTTGGTAATGTTGCGGTAAAAAGCGA
TAAAACCGCCCATAAAGACGATCAATCACCAACCCCACAACCACCTAACAAAGAAAATGGCGGTAGCAGTAGTAGCGTGG
CAAGCCAGCTAGTTAAAGATGCCAATACGGTTAATAGTTTTAATAGTGTGAGCGTGAATAGCATGAACACCACTTTGAGT
GGGGTAACGACAATTTCTCAGCAAACTTCAACGATCAGCAATCTTTTGAGCGAGCATGTGCAAAATTTAAGCAACTTGAT
TTCAAACGCTCAAGGCTTGAGCGATGCGTTCAGCACTCTAGCTAGCGCTCAAAATACTTTAAAGGGTTATTTGGACTCTT
CTAGCACGACAATCGGGCAATTGACGAACGGCTCTAATGCGGTTTTAGGCGCGCTCAATCAGGCTATTAACGAAGTGAAC
ATGGCTTTAAATAGCCTCACGCCATCTGGCGCGTCAGAAGCCGTGGTGGAAAGCGCTATGAGCGGTACAGGTGTTCTTAC
CACAGATCTTTTAGAGGCGTTAAAAACCAATCTAGAAACCCAAAAAGCCGCTTTTATGAATGTGCATAAAAACATTCAAA
CCGCTGTCGCTCAAGCCCAAGCAACCTACACGCCAAGAGTGACTAACACCAATAATTACGGGCAAATGTATGGGGTAGAT
GCGATGGCAGGGTATAAGTGGTTCTTTGGTAAAACCAAACGCTTTGGCTTTAGGACTTATGGATACTACAGCTATAACCA
TGCGAATTTAAGCTTTGTAGGCAGTAAGCTTGGAATCATGGATGGCGCGTCTCAAGTGAATAACTTCACTTATGGCGTGG
GCTTTGATGCGCTCTATAACTTCTATGAAAGCAAAGAGGGCTATAACACAGCAGGATTGTTCTTAGGCTTTGGATTAGGA
GGGGATTCGTTCATCGTGCAAGGAGAGAGCTACTTGAAATCTCAAATGCAAATTTGCAACAACACCGCCGGCTGTTCAGC
GAGCATGAACACGAGCTATTTCCAAATGCCGGTCCAATTTGGCTTTAGGAGCAATTTCTCTAAACACAGCGGGATTGAAG
TGGGCTTTAAATTGCCTTTATTTACCAACCAATTCTATAAAGAAAGGGGTGTAGATGGATCGGTAGATGTGTTCTATAAA
AGGAGCTTCTCTATCTATTTCAACTACATGATCAACTTCTAA

Upstream 100 bases:

>100_bases
CAAGTGCAAGCTGGAAAAAATAAGGGAGAAAGTCATAAAAAAATCATTCAAAAAATTAGGCTTTACTTCTTTAGCGACCA
GTAGTGTGCTTTTAGGGAGC

Downstream 100 bases:

>100_bases
GCCTTTCTCTTCTTTCCAACAGAGGGTTTTCTCTCTGTTGGTTTCTTTTTTCTTTTTTTTGCGGTGTTTGTTTTGTTGTG
TTGGGGGGCTAGGTTTTTGT

Product: outer membrane protein HorA

Products: NA

Alternate protein names: Outer Membrane Protein HopQ; Outer Membrane Protein HorA; Outer Membrane Protein HopZ; Outer Membrane Protein/Porin; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein Adhesin; Outer Membrane Protein Omp; Outer Membrane Function; Outer Membrane Protein HopB; Adhesin; Outer Membrane Protein HorJ; Outer Membrane Protein HopD; Outer Membrane Protein HopL; Outer Membrane Protein HopC; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HopF

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MNATDLETHAALQKPSHVFGNVAVKSDKTAHKDDQSPTPQPPNKENGGSSSSVASQLVKDANTVNSFNSVSVNSMNTTLS
GVTTISQQTSTISNLLSEHVQNLSNLISNAQGLSDAFSTLASAQNTLKGYLDSSSTTIGQLTNGSNAVLGALNQAINEVN
MALNSLTPSGASEAVVESAMSGTGVLTTDLLEALKTNLETQKAAFMNVHKNIQTAVAQAQATYTPRVTNTNNYGQMYGVD
AMAGYKWFFGKTKRFGFRTYGYYSYNHANLSFVGSKLGIMDGASQVNNFTYGVGFDALYNFYESKEGYNTAGLFLGFGLG
GDSFIVQGESYLKSQMQICNNTAGCSASMNTSYFQMPVQFGFRSNFSKHSGIEVGFKLPLFTNQFYKERGVDGSVDVFYK
RSFSIYFNYMINF

Sequences:

>Translated_413_residues
MNATDLETHAALQKPSHVFGNVAVKSDKTAHKDDQSPTPQPPNKENGGSSSSVASQLVKDANTVNSFNSVSVNSMNTTLS
GVTTISQQTSTISNLLSEHVQNLSNLISNAQGLSDAFSTLASAQNTLKGYLDSSSTTIGQLTNGSNAVLGALNQAINEVN
MALNSLTPSGASEAVVESAMSGTGVLTTDLLEALKTNLETQKAAFMNVHKNIQTAVAQAQATYTPRVTNTNNYGQMYGVD
AMAGYKWFFGKTKRFGFRTYGYYSYNHANLSFVGSKLGIMDGASQVNNFTYGVGFDALYNFYESKEGYNTAGLFLGFGLG
GDSFIVQGESYLKSQMQICNNTAGCSASMNTSYFQMPVQFGFRSNFSKHSGIEVGFKLPLFTNQFYKERGVDGSVDVFYK
RSFSIYFNYMINF
>Mature_413_residues
MNATDLETHAALQKPSHVFGNVAVKSDKTAHKDDQSPTPQPPNKENGGSSSSVASQLVKDANTVNSFNSVSVNSMNTTLS
GVTTISQQTSTISNLLSEHVQNLSNLISNAQGLSDAFSTLASAQNTLKGYLDSSSTTIGQLTNGSNAVLGALNQAINEVN
MALNSLTPSGASEAVVESAMSGTGVLTTDLLEALKTNLETQKAAFMNVHKNIQTAVAQAQATYTPRVTNTNNYGQMYGVD
AMAGYKWFFGKTKRFGFRTYGYYSYNHANLSFVGSKLGIMDGASQVNNFTYGVGFDALYNFYESKEGYNTAGLFLGFGLG
GDSFIVQGESYLKSQMQICNNTAGCSASMNTSYFQMPVQFGFRSNFSKHSGIEVGFKLPLFTNQFYKERGVDGSVDVFYK
RSFSIYFNYMINF

Specific function: Unknown

COG id: COG5651

COG function: function code N; PPE-repeat proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44592; Mature: 44592

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNATDLETHAALQKPSHVFGNVAVKSDKTAHKDDQSPTPQPPNKENGGSSSSVASQLVKD
CCCCCCHHHHHHCCCCHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
ANTVNSFNSVSVNSMNTTLSGVTTISQQTSTISNLLSEHVQNLSNLISNAQGLSDAFSTL
HHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ASAQNTLKGYLDSSSTTIGQLTNGSNAVLGALNQAINEVNMALNSLTPSGASEAVVESAM
HHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
SGTGVLTTDLLEALKTNLETQKAAFMNVHKNIQTAVAQAQATYTPRVTNTNNYGQMYGVD
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCH
AMAGYKWFFGKTKRFGFRTYGYYSYNHANLSFVGSKLGIMDGASQVNNFTYGVGFDALYN
HHHCCHHHCCCCCCCCEEEEEEEEECCCCCEECCCHHCCCCCHHHHCCCEEECCHHHHHH
FYESKEGYNTAGLFLGFGLGGDSFIVQGESYLKSQMQICNNTAGCSASMNTSYFQMPVQF
HHHCCCCCCEEEEEEEECCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHH
GFRSNFSKHSGIEVGFKLPLFTNQFYKERGVDGSVDVFYKRSFSIYFNYMINF
CCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCEEEEEEEEEEEEEEEEECC
>Mature Secondary Structure
MNATDLETHAALQKPSHVFGNVAVKSDKTAHKDDQSPTPQPPNKENGGSSSSVASQLVKD
CCCCCCHHHHHHCCCCHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
ANTVNSFNSVSVNSMNTTLSGVTTISQQTSTISNLLSEHVQNLSNLISNAQGLSDAFSTL
HHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ASAQNTLKGYLDSSSTTIGQLTNGSNAVLGALNQAINEVNMALNSLTPSGASEAVVESAM
HHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
SGTGVLTTDLLEALKTNLETQKAAFMNVHKNIQTAVAQAQATYTPRVTNTNNYGQMYGVD
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCH
AMAGYKWFFGKTKRFGFRTYGYYSYNHANLSFVGSKLGIMDGASQVNNFTYGVGFDALYN
HHHCCHHHCCCCCCCCEEEEEEEEECCCCCEECCCHHCCCCCHHHHCCCEEECCHHHHHH
FYESKEGYNTAGLFLGFGLGGDSFIVQGESYLKSQMQICNNTAGCSASMNTSYFQMPVQF
HHHCCCCCCEEEEEEEECCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHH
GFRSNFSKHSGIEVGFKLPLFTNQFYKERGVDGSVDVFYKRSFSIYFNYMINF
CCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCEEEEEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA