| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188526866
Identifier: 188526866
GI number: 188526866
Start: 55244
End: 55453
Strand: Direct
Name: 188526866
Synonym: HPSH_00280
Alternate gene names: NA
Gene position: 55244-55453 (Clockwise)
Preceding gene: 188526854
Following gene: 188526867
Centisome position: 3.43
GC content: 39.52
Gene sequence:
>210_bases ATGAAAACAATCCAAAATGGTATTATGATTGGCACACTCGGCGCGTTGTTATTGAGCGGTTGCTCTAGCTTTGATGCTCA GCGTTTTGCTTGTCTTCCTAAAGACCATTCTCTAAAAGACGCTTCTACAAAAAAAGAAGTGCAATACACGCCTAAGGGCT TTTTTGACCCTTATTCTTCTAGTTTAAACCATTGGGATTCTACATTCTAG
Upstream 100 bases:
>100_bases TATAACATTCGCATCGTCTAATTTAAAGTTTAGCTTATTCAATTAAACGATTTTAAATTAAACGGATTTATAAAAAATTT TACAAAACAAAGGATATAAA
Downstream 100 bases:
>100_bases GGGTTTAAAAGAGGGGGCAAAAAGGGGGGGATATAAAGCTCATTTTAAGTTTTCTCAAATTACAATAACAATCTTTTTAA CATTGATATGAGATAAAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MKTIQNGIMIGTLGALLLSGCSSFDAQRFACLPKDHSLKDASTKKEVQYTPKGFFDPYSSSLNHWDSTF
Sequences:
>Translated_69_residues MKTIQNGIMIGTLGALLLSGCSSFDAQRFACLPKDHSLKDASTKKEVQYTPKGFFDPYSSSLNHWDSTF >Mature_69_residues MKTIQNGIMIGTLGALLLSGCSSFDAQRFACLPKDHSLKDASTKKEVQYTPKGFFDPYSSSLNHWDSTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7633; Mature: 7633
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTIQNGIMIGTLGALLLSGCSSFDAQRFACLPKDHSLKDASTKKEVQYTPKGFFDPYSS CCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCEEECCCCCCCCCCH SLNHWDSTF HCCCCCCCC >Mature Secondary Structure MKTIQNGIMIGTLGALLLSGCSSFDAQRFACLPKDHSLKDASTKKEVQYTPKGFFDPYSS CCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCEEECCCCCCCCCCH SLNHWDSTF HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA