The gene/protein map for NC_002516 is currently unavailable.
Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188526829

Identifier: 188526829

GI number: 188526829

Start: 16686

End: 18026

Strand: Direct

Name: 188526829

Synonym: HPSH_00095

Alternate gene names: NA

Gene position: 16686-18026 (Clockwise)

Preceding gene: 188526828

Following gene: 188526830

Centisome position: 1.04

GC content: 39.45

Gene sequence:

>1341_bases
ATGGACTTAGAACATTTTAACACGCTCTATTATGAAGAAAGCCCTAAAAAAGCTTATGAATATTCCAAACAATTCACTAA
GAAAAAAAAGAACGCTCTTTTATGGGATTTGCAAAACGGCTTGAGCGCTTTATACGCAAGAGATTACAAGACTTCTTTAG
GGGTATTAGATCAAGCCGAACAACGCTTTGATAAAACGCAAAGCGCTTTTACAAGAGGGGCTGGTTATGTGGGCGCTACC
ATGATTAATGATAATGTGCGCGCTTATGGGGGGAATATTTATGAGGGCGTTTTAATCAATTATTACAAAGCGATAGACTA
CATGCTTTTAAACGATAGCGCGAACGCTAGGGTGCAATTCAACCGCGCGAACGAACGCCAGCGCAGGGCTAAAGAATTTT
ATTATGAGGAAGTGCAAAAAGCCATTAAAGAGATCGATTCTAGCAAAAAGCACAACATTAATATGGAACGCTCTAGGGCA
GAAGTGAGCGAGATCTTAAACAACACCTATTCTAATTTAGACAAATACGAAGCTTATCAAGGCTTGCTTAACCCGGCGGT
TTCGTATCTTTCAGGGTTGTTTTACGCTTTAAATGGGGATAAAAATAAGGGGTTAGGCTATCTTAATGAAGCCTATGGGA
TCAGTCAAAGCCCTTTCGTGGCTAAAGACTTGGTTTTTTTCAAAAACCCTAATAGGAGTTATTTCACTTGGATCATCATT
GAAGATGGCAAAGAGCCACAAAAAAGCGAATTTAAAATTGATGTGCCTATCTATGCGATCGATTCGATTTATAATGTGAG
TGTGGCCTTGCCCAAGCTAGAAAAAGGGGAAGCGTTTTATCAAAATTTCACTTTAAAAGACGGCGAAAAAGTAACACCCT
TTGACACTTTAGCCTCAATAGACGCGGTGGTTTCTAGCGAGTTTAGGAAGCAATTGCCCTACATTATCACCAGAGCCATT
TTATCGGCTACTTTTAAGGTGGGCATGCAAGCGGTGGCGAATTATTATTTGGGGTTTGTTGGAGGGCTAGTAACTTCGTT
GTATTCAGGCGTTAGCACCTTTGCAGATACCAGGAACACGAGCATTTTTGCCCATAAAATCTATCTTATGCGTATCAAAA
ATAAAGCCTTTGAAAATTATGAAGTTCAAGCTGATTCTATTGACGCTTTTTCGTTTTCATTAAAGCCTTGTAAAAGATCG
CTTGAAAGCCCTAAAGTCATTGACGCTAGGGAATTGCTTTCTGGGTTTGTAACAGCCCCACAAATCTTTTGCTCTAACCG
CCATAATATTTTATACGTGCGCAGTTTTAAAAACGGGTTTGTTTTGAATCGTTTAAAATGA

Upstream 100 bases:

>100_bases
CAAGCAAAAAATGCCAATTAAAAGGGTTAGATTGAAAATATTCGTTCTGTTGATGTCGGTAATTTTAGGAGTATCATTAA
CAGGTTGCATAGGCTATCGT

Downstream 100 bases:

>100_bases
TTTAAAAACCCCCAAAGTTTTAAGTGTCATTGGCATTAAACACAAACACGATATAATTATGAAACGATACGAAAACCTAA
ATTAAGGGGAAGTCATGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Sporulation Domain-Containing Protein

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MDLEHFNTLYYEESPKKAYEYSKQFTKKKKNALLWDLQNGLSALYARDYKTSLGVLDQAEQRFDKTQSAFTRGAGYVGAT
MINDNVRAYGGNIYEGVLINYYKAIDYMLLNDSANARVQFNRANERQRRAKEFYYEEVQKAIKEIDSSKKHNINMERSRA
EVSEILNNTYSNLDKYEAYQGLLNPAVSYLSGLFYALNGDKNKGLGYLNEAYGISQSPFVAKDLVFFKNPNRSYFTWIII
EDGKEPQKSEFKIDVPIYAIDSIYNVSVALPKLEKGEAFYQNFTLKDGEKVTPFDTLASIDAVVSSEFRKQLPYIITRAI
LSATFKVGMQAVANYYLGFVGGLVTSLYSGVSTFADTRNTSIFAHKIYLMRIKNKAFENYEVQADSIDAFSFSLKPCKRS
LESPKVIDARELLSGFVTAPQIFCSNRHNILYVRSFKNGFVLNRLK

Sequences:

>Translated_446_residues
MDLEHFNTLYYEESPKKAYEYSKQFTKKKKNALLWDLQNGLSALYARDYKTSLGVLDQAEQRFDKTQSAFTRGAGYVGAT
MINDNVRAYGGNIYEGVLINYYKAIDYMLLNDSANARVQFNRANERQRRAKEFYYEEVQKAIKEIDSSKKHNINMERSRA
EVSEILNNTYSNLDKYEAYQGLLNPAVSYLSGLFYALNGDKNKGLGYLNEAYGISQSPFVAKDLVFFKNPNRSYFTWIII
EDGKEPQKSEFKIDVPIYAIDSIYNVSVALPKLEKGEAFYQNFTLKDGEKVTPFDTLASIDAVVSSEFRKQLPYIITRAI
LSATFKVGMQAVANYYLGFVGGLVTSLYSGVSTFADTRNTSIFAHKIYLMRIKNKAFENYEVQADSIDAFSFSLKPCKRS
LESPKVIDARELLSGFVTAPQIFCSNRHNILYVRSFKNGFVLNRLK
>Mature_446_residues
MDLEHFNTLYYEESPKKAYEYSKQFTKKKKNALLWDLQNGLSALYARDYKTSLGVLDQAEQRFDKTQSAFTRGAGYVGAT
MINDNVRAYGGNIYEGVLINYYKAIDYMLLNDSANARVQFNRANERQRRAKEFYYEEVQKAIKEIDSSKKHNINMERSRA
EVSEILNNTYSNLDKYEAYQGLLNPAVSYLSGLFYALNGDKNKGLGYLNEAYGISQSPFVAKDLVFFKNPNRSYFTWIII
EDGKEPQKSEFKIDVPIYAIDSIYNVSVALPKLEKGEAFYQNFTLKDGEKVTPFDTLASIDAVVSSEFRKQLPYIITRAI
LSATFKVGMQAVANYYLGFVGGLVTSLYSGVSTFADTRNTSIFAHKIYLMRIKNKAFENYEVQADSIDAFSFSLKPCKRS
LESPKVIDARELLSGFVTAPQIFCSNRHNILYVRSFKNGFVLNRLK

Specific function: Unknown

COG id: COG3014

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50948; Mature: 50948

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLEHFNTLYYEESPKKAYEYSKQFTKKKKNALLWDLQNGLSALYARDYKTSLGVLDQAE
CCCCHHCCEEECCCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
QRFDKTQSAFTRGAGYVGATMINDNVRAYGGNIYEGVLINYYKAIDYMLLNDSANARVQF
HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCEEEE
NRANERQRRAKEFYYEEVQKAIKEIDSSKKHNINMERSRAEVSEILNNTYSNLDKYEAYQ
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLNPAVSYLSGLFYALNGDKNKGLGYLNEAYGISQSPFVAKDLVFFKNPNRSYFTWIII
HHHHHHHHHHHHHEEEECCCCCCCCCCHHHHCCCCCCCCHHHHEEEEECCCCCEEEEEEE
EDGKEPQKSEFKIDVPIYAIDSIYNVSVALPKLEKGEAFYQNFTLKDGEKVTPFDTLASI
ECCCCCCCCCEEEECCEEEECCEEEEEEECCCCCCCCHHHHCCCCCCCCCCCCHHHHHHH
DAVVSSEFRKQLPYIITRAILSATFKVGMQAVANYYLGFVGGLVTSLYSGVSTFADTRNT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SIFAHKIYLMRIKNKAFENYEVQADSIDAFSFSLKPCKRSLESPKVIDARELLSGFVTAP
EEEEEEEEEEEEHHHCCCCCEEECCCCCCEEEECHHHHHCCCCCCCCCHHHHHHHHHCCC
QIFCSNRHNILYVRSFKNGFVLNRLK
HHHHCCCCCEEEEEECCCCCEEECCC
>Mature Secondary Structure
MDLEHFNTLYYEESPKKAYEYSKQFTKKKKNALLWDLQNGLSALYARDYKTSLGVLDQAE
CCCCHHCCEEECCCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
QRFDKTQSAFTRGAGYVGATMINDNVRAYGGNIYEGVLINYYKAIDYMLLNDSANARVQF
HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCEEEE
NRANERQRRAKEFYYEEVQKAIKEIDSSKKHNINMERSRAEVSEILNNTYSNLDKYEAYQ
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLNPAVSYLSGLFYALNGDKNKGLGYLNEAYGISQSPFVAKDLVFFKNPNRSYFTWIII
HHHHHHHHHHHHHEEEECCCCCCCCCCHHHHCCCCCCCCHHHHEEEEECCCCCEEEEEEE
EDGKEPQKSEFKIDVPIYAIDSIYNVSVALPKLEKGEAFYQNFTLKDGEKVTPFDTLASI
ECCCCCCCCCEEEECCEEEECCEEEEEEECCCCCCCCHHHHCCCCCCCCCCCCHHHHHHH
DAVVSSEFRKQLPYIITRAILSATFKVGMQAVANYYLGFVGGLVTSLYSGVSTFADTRNT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SIFAHKIYLMRIKNKAFENYEVQADSIDAFSFSLKPCKRSLESPKVIDARELLSGFVTAP
EEEEEEEEEEEEHHHCCCCCEEECCCCCCEEEECHHHHHCCCCCCCCCHHHHHHHHHCCC
QIFCSNRHNILYVRSFKNGFVLNRLK
HHHHCCCCCEEEEEECCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA