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The map label for this gene is glpF [C]

Identifier: 187930660

GI number: 187930660

Start: 3767850

End: 3768590

Strand: Reverse

Name: glpF [C]

Synonym: Rpic_3596

Alternate gene names: 187930660

Gene position: 3768590-3767850 (Counterclockwise)

Preceding gene: 187930661

Following gene: 187930647

Centisome position: 95.59

GC content: 69.37

Gene sequence:

>741_bases
ATGTCTGCTCCACCGTCCCTGGCTCGCCGCATCGTCGCGGAAGGGCTTGGTACGGCCTTGCTGATTGCGGTAGTGATCGG
CACGGGCATCCACGCAAGCCGGCTCTCCGGCGGCGATGCCACCTGGACGCTGCTGGCGCAATCGCTGGCCGGCGGCGCCG
GTTTGCTGGCGCTGCTGACGGTGTTCGCGCCAGTGTCGGGGGCGCACCTGAACCCGGCGGTCACGCTGTCCGCGTTGCTG
CGGGGCGGTCTGCGTGGGCATGAGGCGCTGGCCTATCAGGCTGCACAGGCCGTGGGCGCCGCGCTGGGTGTGGCAGCCGC
GCATGGCATGTTCGGCATGCCGGCGTGGGCAGCGGGCACTCACGCCGCCACAGGGCCGGCGCTGTGGTGGAGCGAAGCGC
TGGCAACGTTCGGACTGATCGGGGTGGGCATCGCATGCGGCCGTCATGCGCCAAAGCAATTGCCGCTGGTGGTGGCCGCC
TATATCGCGGCCGGGTACTGGTTCACGTCGTCGTCATCGCTGGCCAACCCCGCGTTGGCTCTTGCCTGCGCGCTGACCGA
CGGCCCCTCCGGCATCCGCCCCAGCGATGTCCCGGGCTACATGCTGGCGCAACTGGTGGGCACGTTGCTGGCAACGCCGT
TGTTCAATTGGCTGATGGGTGTGGACGCAGCACCCGCGCTGGCATCCGGCACCACCATCGCACCAGCGCAAGCCGTGCCG
ATGCATCGCCAGGCAAGTTGA

Upstream 100 bases:

>100_bases
GCCGCAGCGGTGATTCCACACTCCCGCGCGATGCGCTTGGCATTGCTCGCCTTCTTCCCGCATGGCCACTGTTTCCCACC
TTCGTACCGCGGCTTCGGCC

Downstream 100 bases:

>100_bases
TGACCGGCGCTCAGCGGGGCGCTGTCAGCCCGCTGGCGCGGGCGTACTGAAAGAGATCGATTTCGCGCACCAGGCCCAGC
TTGCGCAATGCTACGGCCTT

Product: major intrinsic protein

Products: glycerol [Cytoplasm] [C]

Alternate protein names: Phosphotyrosine Protein Phosphatase; MIP Family Protein; Low Molecular Weight Phosphotyrosine Protein Phosphatase; Transport Transmembrane Protein; Glycerol Uptake Transporter Protein MIP Family; Aquaglyceroporin Intrinsic Protein Family; MIP Family Permease; Mip Family Channel Protein; Channel Transporter; Transmembrane Aquaporin; Glycerol Uptake Facilitator Or Related Permease; Transmembrane ABC Transporter Protein; MIP Family Channel Protein; Transmembrane Abc Transporter Protein Intrinsic Protein; Transmembrane ABC Transporter Protein Intrinsic Protein; Aquaporin/Glycerol Uptake Facilitator Protein

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MSAPPSLARRIVAEGLGTALLIAVVIGTGIHASRLSGGDATWTLLAQSLAGGAGLLALLTVFAPVSGAHLNPAVTLSALL
RGGLRGHEALAYQAAQAVGAALGVAAAHGMFGMPAWAAGTHAATGPALWWSEALATFGLIGVGIACGRHAPKQLPLVVAA
YIAAGYWFTSSSSLANPALALACALTDGPSGIRPSDVPGYMLAQLVGTLLATPLFNWLMGVDAAPALASGTTIAPAQAVP
MHRQAS

Sequences:

>Translated_246_residues
MSAPPSLARRIVAEGLGTALLIAVVIGTGIHASRLSGGDATWTLLAQSLAGGAGLLALLTVFAPVSGAHLNPAVTLSALL
RGGLRGHEALAYQAAQAVGAALGVAAAHGMFGMPAWAAGTHAATGPALWWSEALATFGLIGVGIACGRHAPKQLPLVVAA
YIAAGYWFTSSSSLANPALALACALTDGPSGIRPSDVPGYMLAQLVGTLLATPLFNWLMGVDAAPALASGTTIAPAQAVP
MHRQAS
>Mature_245_residues
SAPPSLARRIVAEGLGTALLIAVVIGTGIHASRLSGGDATWTLLAQSLAGGAGLLALLTVFAPVSGAHLNPAVTLSALLR
GGLRGHEALAYQAAQAVGAALGVAAAHGMFGMPAWAAGTHAATGPALWWSEALATFGLIGVGIACGRHAPKQLPLVVAAY
IAAGYWFTSSSSLANPALALACALTDGPSGIRPSDVPGYMLAQLVGTLLATPLFNWLMGVDAAPALASGTTIAPAQAVPM
HRQAS

Specific function: Transporter Of Glycerol Across The Cytoplasmic Membrane, With Limited Permeability To Water And Small Uncharged Compounds Such As Polyols. [C]

COG id: COG0580

COG function: function code G; Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family)

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24422; Mature: 24290

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: PS00221 MIP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPPSLARRIVAEGLGTALLIAVVIGTGIHASRLSGGDATWTLLAQSLAGGAGLLALLT
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHCCCHHHHHHHH
VFAPVSGAHLNPAVTLSALLRGGLRGHEALAYQAAQAVGAALGVAAAHGMFGMPAWAAGT
HHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCC
HAATGPALWWSEALATFGLIGVGIACGRHAPKQLPLVVAAYIAAGYWFTSSSSLANPALA
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
LACALTDGPSGIRPSDVPGYMLAQLVGTLLATPLFNWLMGVDAAPALASGTTIAPAQAVP
EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCC
MHRQAS
CCCCCC
>Mature Secondary Structure 
SAPPSLARRIVAEGLGTALLIAVVIGTGIHASRLSGGDATWTLLAQSLAGGAGLLALLT
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHCCCHHHHHHHH
VFAPVSGAHLNPAVTLSALLRGGLRGHEALAYQAAQAVGAALGVAAAHGMFGMPAWAAGT
HHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCC
HAATGPALWWSEALATFGLIGVGIACGRHAPKQLPLVVAAYIAAGYWFTSSSSLANPALA
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
LACALTDGPSGIRPSDVPGYMLAQLVGTLLATPLFNWLMGVDAAPALASGTTIAPAQAVP
EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCC
MHRQAS
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: glycerol [Periplasm] [C]

Specific reaction: glycerol [Periplasm] = glycerol [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA