Click here to switch to the map view.

The map label for this gene is ybeQ [C]

Identifier: 187930623

GI number: 187930623

Start: 3726101

End: 3726904

Strand: Reverse

Name: ybeQ [C]

Synonym: Rpic_3559

Alternate gene names: 187930623

Gene position: 3726904-3726101 (Counterclockwise)

Preceding gene: 187930624

Following gene: 187930618

Centisome position: 94.53

GC content: 66.67

Gene sequence:

>804_bases
ATGCCATCTCTTCGTTCCGCATGGGCGGGTGCACCGGCCATGGAATCTCCGCGACAATCGGTGCCGATGCTCACCGTGGC
CGCCGCGCTGGCGATCATCGTGGCGGCAGGCGGTTGGCTGTCGCATGCGCGCCAGGCACCCGCCGTCGATGCCACGCAGC
TGGAATCGTGGCGCGCAATGGTCGTGCAAGCGATGGAGCCCGAGGCGCTGCAGCAATTGCGTCAGCGCGCACGCAGCGGC
TCCGTGCCGGCGCAGTCAGCGTTGGGCGAAGCCTTGCTCAGCGCGCACGACGGCGCCTTGCGGAACGAAGGGATGCGCTG
GCTTGAAACCGCTGCATCGAGCGACCCACGTGCGCAGTTATCGCTGGGCAAGGCGCTGCTGCTCGGTACCGGCGGTGTGG
AACGCGACTACCCGCGCGCGCTGCGCCTGCTGCGTCAATCCGCTGACAAGGGCGACGCGGCCGCGGCGTACTACCTGGGC
GTGATGTATCGCAGCGGCTACGGCACGGCTGTCGACACAACACAGGCTGCACACTGGTTTGATCGTGCTGCCCGCCACGA
GATTCCGGCAGCGATGTTCATGCTGGCGAATGCCTACCGCGACGGTGATGGTGTGCCACGCGATGAAGCCCGCGCGCTGG
CGTTGTACCAGGACGCCGCCGAGCACGAATTGCCGGAGGCCGTGCAAGCTCTGGCGATGGCGTATCAGAACGGCGAACTG
GGTCTCAAGCGCGACGATGCCGCGTATCACCAGCAGTGGATTGAAACGGCACATGCGCTGAAGCATCCTGCGCTCGCGCC
GTGA

Upstream 100 bases:

>100_bases
GCCGGCATCACCAACGTCACACAGGTGGCTGCGGATGACGGTTCGGGCAAGGGCTTGGCGGTGTACCAGATCGACCTGAC
GCAGTAAGCAGGAGCCGACG

Downstream 100 bases:

>100_bases
TGCGGCGTTCTCTTCAGTAAAGCCCGCGGGTCTGGGCGTGCAGGCGCACCAGACCCAGCAGGGCATCAATCTGCGGCGTC
GGCACGCCCACATGCTGGCC

Product: Sel1 domain-containing protein repeat-containing protein

Products: NA

Alternate protein names: Sel1 Repeat-Containing Protein; Sel1 Domain-Containing Protein; TPR Repeat-Containing Protein; Sel1 Domain-Containing Protein Repeat-Containing Protein; Sel1 Repeat Family; TPR Repeat Protein SEL1 Subfamily; TPR Repeat Protein; Serine/Threonine Protein Kinase; TPR Repeat-Containing SEL1 Subfamily Protein; Sodium-Type Flagellar Motor Component; Tetratricopeptide Repeat Family Protein; Peptidase; Sel1 Repeat Protein; SEL1 Repeat-Containing Protein; Sel1 Repeat Family Protein; Sel1 Domain Protein Repeat; Signal Peptide; Protein Prenylyltransferase Domain-Containing Protein; AAA ATPase; Beta-Lactamase HcpD; Tetratricopeptide Repeat-Like Protein; Sel1-Like Repeat-Containing Serine/Threonine Protein Kinase; Sel1-Like Repeat Protein; TPR Repeat- And Sel1 Domain-Containing Protein; Sporulation Domain-Containing Protein; TPR Repeat SEL1 Subfamily; TPR Repeat Protein Protein-Protein Interaction; Enhanced Entry Protein EnhC; Tpr Repeat Sel1 Subfamily; Suppressor Of Lin-12-Like Protein

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MPSLRSAWAGAPAMESPRQSVPMLTVAAALAIIVAAGGWLSHARQAPAVDATQLESWRAMVVQAMEPEALQQLRQRARSG
SVPAQSALGEALLSAHDGALRNEGMRWLETAASSDPRAQLSLGKALLLGTGGVERDYPRALRLLRQSADKGDAAAAYYLG
VMYRSGYGTAVDTTQAAHWFDRAARHEIPAAMFMLANAYRDGDGVPRDEARALALYQDAAEHELPEAVQALAMAYQNGEL
GLKRDDAAYHQQWIETAHALKHPALAP

Sequences:

>Translated_267_residues
MPSLRSAWAGAPAMESPRQSVPMLTVAAALAIIVAAGGWLSHARQAPAVDATQLESWRAMVVQAMEPEALQQLRQRARSG
SVPAQSALGEALLSAHDGALRNEGMRWLETAASSDPRAQLSLGKALLLGTGGVERDYPRALRLLRQSADKGDAAAAYYLG
VMYRSGYGTAVDTTQAAHWFDRAARHEIPAAMFMLANAYRDGDGVPRDEARALALYQDAAEHELPEAVQALAMAYQNGEL
GLKRDDAAYHQQWIETAHALKHPALAP
>Mature_266_residues
PSLRSAWAGAPAMESPRQSVPMLTVAAALAIIVAAGGWLSHARQAPAVDATQLESWRAMVVQAMEPEALQQLRQRARSGS
VPAQSALGEALLSAHDGALRNEGMRWLETAASSDPRAQLSLGKALLLGTGGVERDYPRALRLLRQSADKGDAAAAYYLGV
MYRSGYGTAVDTTQAAHWFDRAARHEIPAAMFMLANAYRDGDGVPRDEARALALYQDAAEHELPEAVQALAMAYQNGELG
LKRDDAAYHQQWIETAHALKHPALAP

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI19923669, Length=136, Percent_Identity=34.5588235294118, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28688; Mature: 28556

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSLRSAWAGAPAMESPRQSVPMLTVAAALAIIVAAGGWLSHARQAPAVDATQLESWRAM
CCCHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHH
VVQAMEPEALQQLRQRARSGSVPAQSALGEALLSAHDGALRNEGMRWLETAASSDPRAQL
HHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHH
SLGKALLLGTGGVERDYPRALRLLRQSADKGDAAAAYYLGVMYRSGYGTAVDTTQAAHWF
HHCHHHEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
DRAARHEIPAAMFMLANAYRDGDGVPRDEARALALYQDAAEHELPEAVQALAMAYQNGEL
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GLKRDDAAYHQQWIETAHALKHPALAP
CCCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PSLRSAWAGAPAMESPRQSVPMLTVAAALAIIVAAGGWLSHARQAPAVDATQLESWRAM
CCHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHH
VVQAMEPEALQQLRQRARSGSVPAQSALGEALLSAHDGALRNEGMRWLETAASSDPRAQL
HHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHH
SLGKALLLGTGGVERDYPRALRLLRQSADKGDAAAAYYLGVMYRSGYGTAVDTTQAAHWF
HHCHHHEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
DRAARHEIPAAMFMLANAYRDGDGVPRDEARALALYQDAAEHELPEAVQALAMAYQNGEL
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GLKRDDAAYHQQWIETAHALKHPALAP
CCCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA