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The map label for this gene is 187930611

Identifier: 187930611

GI number: 187930611

Start: 3716098

End: 3716862

Strand: Reverse

Name: 187930611

Synonym: Rpic_3547

Alternate gene names: NA

Gene position: 3716862-3716098 (Counterclockwise)

Preceding gene: 187930612

Following gene: 187930610

Centisome position: 94.28

GC content: 67.58

Gene sequence:

>765_bases
ATGGTTGAAGGACACACCACGCATCCGGCGCACGCGCCGGCGCATCTGTCAGGCGGCTACGGCATGCCGGCACGGGTTCG
CGCGTGGTGGGTCGCCGCTGCCGTGGCAGGCGTGACCTACGGCGGCATGCTGACCATGGTGGCCGTGGACGTACCGCCCG
GCACCCCGCTGGTCGGTCGCATCGTCGCGCAGCCGCTGTGGAAAATGCTCATGGCGTTGCTGCTGGCGCGCGCCGCCTCG
CTACACGAGATTCCGCGCGAGCGGCGCTGGCTGATCGGCGCCATGGGGTTCTCTGCGATGGGAGATCTGTGGCTTGCGCT
GCCGTGGCTGTCGTTTTCGTTCATGGCCGGCCTGGGCTGCTTCTTGCTGGCGCACTTGTGCTACCTGCGGGTGCTGGTGG
GGCTGCGTGGCGTGTCATCGGCCATCCGCATGATCGGTGTCGGCGTGATGATCGGCGTGGCCATCGGCATGCTGCTGTGG
TACTGGCCGGGCCTGGGTGAGTTGAAGGGGCCGGTGATCGCCTACATGCTCGTGCTGTCGGCGATGGTGTGCGCGGCATT
GCTGGCGCGCCTGCCTGGTCCGCTGACAGCTTGGGGCGCGCTTGCCTTTGCAGCGTCGGATGCGATGATCGGCATCAGCG
TGTTCGTCTTTCCGTTCACCGACCATGAGCTGGCCATCTGGTGGAGCTACGCCGCTGCGCAGCTTCTCATCAGTGCGGGA
TTGCTCACGCGCCGTACGCCGCCCGCGCGCCGCGCCACGGCATAA

Upstream 100 bases:

>100_bases
GTGGGTAGATTCGCGCCTTGCGCCAGGGTGCGCGGCGTGTCACGCTGCAAGCCGACATCCCTTGCTGATATGAATCGCCT
CTCTTGGGCGGGAGACCACG

Downstream 100 bases:

>100_bases
GGTCTGTCCGACGTTTCTTCCGCTGCGAGAGCCCCATGTTGCAGACCCTCGACGCTGCCACCACGGCGGCCCGCTTGCCG
TATGCCGCGTTGGCCGATGC

Product: YhhN family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MVEGHTTHPAHAPAHLSGGYGMPARVRAWWVAAAVAGVTYGGMLTMVAVDVPPGTPLVGRIVAQPLWKMLMALLLARAAS
LHEIPRERRWLIGAMGFSAMGDLWLALPWLSFSFMAGLGCFLLAHLCYLRVLVGLRGVSSAIRMIGVGVMIGVAIGMLLW
YWPGLGELKGPVIAYMLVLSAMVCAALLARLPGPLTAWGALAFAASDAMIGISVFVFPFTDHELAIWWSYAAAQLLISAG
LLTRRTPPARRATA

Sequences:

>Translated_254_residues
MVEGHTTHPAHAPAHLSGGYGMPARVRAWWVAAAVAGVTYGGMLTMVAVDVPPGTPLVGRIVAQPLWKMLMALLLARAAS
LHEIPRERRWLIGAMGFSAMGDLWLALPWLSFSFMAGLGCFLLAHLCYLRVLVGLRGVSSAIRMIGVGVMIGVAIGMLLW
YWPGLGELKGPVIAYMLVLSAMVCAALLARLPGPLTAWGALAFAASDAMIGISVFVFPFTDHELAIWWSYAAAQLLISAG
LLTRRTPPARRATA
>Mature_254_residues
MVEGHTTHPAHAPAHLSGGYGMPARVRAWWVAAAVAGVTYGGMLTMVAVDVPPGTPLVGRIVAQPLWKMLMALLLARAAS
LHEIPRERRWLIGAMGFSAMGDLWLALPWLSFSFMAGLGCFLLAHLCYLRVLVGLRGVSSAIRMIGVGVMIGVAIGMLLW
YWPGLGELKGPVIAYMLVLSAMVCAALLARLPGPLTAWGALAFAASDAMIGISVFVFPFTDHELAIWWSYAAAQLLISAG
LLTRRTPPARRATA

Specific function: Unknown

COG id: COG3714

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TMEM86 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012506 [H]

Pfam domain/function: PF07947 YhhN [H]

EC number: NA

Molecular weight: Translated: 27113; Mature: 27113

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEGHTTHPAHAPAHLSGGYGMPARVRAWWVAAAVAGVTYGGMLTMVAVDVPPGTPLVGR
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHH
IVAQPLWKMLMALLLARAASLHEIPRERRWLIGAMGFSAMGDLWLALPWLSFSFMAGLGC
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLLAHLCYLRVLVGLRGVSSAIRMIGVGVMIGVAIGMLLWYWPGLGELKGPVIAYMLVLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
AMVCAALLARLPGPLTAWGALAFAASDAMIGISVFVFPFTDHELAIWWSYAAAQLLISAG
HHHHHHHHHHCCCCHHHHHHHHHHHCCHHEEEEEEEEECCCCCEEEHHHHHHHHHHHHHH
LLTRRTPPARRATA
HHHCCCCCCCCCCC
>Mature Secondary Structure
MVEGHTTHPAHAPAHLSGGYGMPARVRAWWVAAAVAGVTYGGMLTMVAVDVPPGTPLVGR
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHH
IVAQPLWKMLMALLLARAASLHEIPRERRWLIGAMGFSAMGDLWLALPWLSFSFMAGLGC
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLLAHLCYLRVLVGLRGVSSAIRMIGVGVMIGVAIGMLLWYWPGLGELKGPVIAYMLVLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
AMVCAALLARLPGPLTAWGALAFAASDAMIGISVFVFPFTDHELAIWWSYAAAQLLISAG
HHHHHHHHHHCCCCHHHHHHHHHHHCCHHEEEEEEEEECCCCCEEEHHHHHHHHHHHHHH
LLTRRTPPARRATA
HHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]