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The map label for this gene is yraP [C]

Identifier: 187930527

GI number: 187930527

Start: 3620822

End: 3621640

Strand: Reverse

Name: yraP [C]

Synonym: Rpic_3462

Alternate gene names: 187930527

Gene position: 3621640-3620822 (Counterclockwise)

Preceding gene: 187930528

Following gene: 187930526

Centisome position: 91.86

GC content: 68.25

Gene sequence:

>819_bases
ATGAAACTCTCGTCGCCTACGTTTGCCCGTTTCCGTCGCACGGTCACGCGCACCGCCGTGCTGGCCGCCCTGGCCGGCAT
GACCGCAACGCAGTTGACCGCCTGCTTCCCGCTGTTTGCGGGCGCCGTGGCCGGCGGCGTGGCGCTTGCGACCGACCGGC
GCCCAACCGCCACCCAGACCATCGACCGCGGCCTGCAGATGGAAGCCGAGAACACGCTGATCTCGCGCTACGACGGCCGC
GCCCACGTGAACGTGACGGTCTACAACCGCAAGGTCCTGCTGACCGGCGAAGCCGGCACTGAGCAGACCAAGCAGGAGAT
CGGCCAATACGCGCAGAAGCTGCAGAACGCACGTGAGGTCGTCAACGAGATCGTGGTGACGCCGGAGTCGAGCACGTTCG
GCTCGCGCACCAATGACACGTACATCACCACCAAGGTGAAGAGCGTGCTGGCCGGCACGGAAGGCCTGCCCTGGAACTCC
ATCAAGGTGACCACCGAAGCGCAGACCGTCTTCCTGCTGGGCGTGGTGACCGAGGCCGAAGGCAACCGCGCCACCGAAGC
CGTGCGCACCGTGAGCGGCGTCAACAAGGTCGTGAAGGTGTTCGACTACGTGACCGAAGACGAGCGCAAGCGCCTGGACG
CCAATGCCACGTCGACCAACCCGTCGACCGCGCCCGACGCGTCGCAAGGCACGCCAACCCGCACGCAGGGTACGCCGACG
GCCACGCAGGCACCGGCCCCGGTCACGTCGGCCGCGCCGGGCGTGACCGTGTCGCCCACCACCTCGCCCGCGCTGCCGCC
GGGCAAGCAACTGCCGTAA

Upstream 100 bases:

>100_bases
ATCGCCATCGATGGCGCGCGTATCGAATGGATGCGCGATGCCTTTGGTGTTGACGCATGAACCCCGCTCTTCTTTCTTCC
GCACTTCATTCAAGGACAGC

Downstream 100 bases:

>100_bases
GCCAGCGCGGCCACACCGCATCGCAAGAAACGCAGGCACCGCGCTGCGTTTTTTGTTGGCTGCACGCATCACAGGGCGCA
TGGCCGGCCGTGCGTGTTAG

Product: transport-associated

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MKLSSPTFARFRRTVTRTAVLAALAGMTATQLTACFPLFAGAVAGGVALATDRRPTATQTIDRGLQMEAENTLISRYDGR
AHVNVTVYNRKVLLTGEAGTEQTKQEIGQYAQKLQNAREVVNEIVVTPESSTFGSRTNDTYITTKVKSVLAGTEGLPWNS
IKVTTEAQTVFLLGVVTEAEGNRATEAVRTVSGVNKVVKVFDYVTEDERKRLDANATSTNPSTAPDASQGTPTRTQGTPT
ATQAPAPVTSAAPGVTVSPTTSPALPPGKQLP

Sequences:

>Translated_272_residues
MKLSSPTFARFRRTVTRTAVLAALAGMTATQLTACFPLFAGAVAGGVALATDRRPTATQTIDRGLQMEAENTLISRYDGR
AHVNVTVYNRKVLLTGEAGTEQTKQEIGQYAQKLQNAREVVNEIVVTPESSTFGSRTNDTYITTKVKSVLAGTEGLPWNS
IKVTTEAQTVFLLGVVTEAEGNRATEAVRTVSGVNKVVKVFDYVTEDERKRLDANATSTNPSTAPDASQGTPTRTQGTPT
ATQAPAPVTSAAPGVTVSPTTSPALPPGKQLP
>Mature_272_residues
MKLSSPTFARFRRTVTRTAVLAALAGMTATQLTACFPLFAGAVAGGVALATDRRPTATQTIDRGLQMEAENTLISRYDGR
AHVNVTVYNRKVLLTGEAGTEQTKQEIGQYAQKLQNAREVVNEIVVTPESSTFGSRTNDTYITTKVKSVLAGTEGLPWNS
IKVTTEAQTVFLLGVVTEAEGNRATEAVRTVSGVNKVVKVFDYVTEDERKRLDANATSTNPSTAPDASQGTPTRTQGTPT
ATQAPAPVTSAAPGVTVSPTTSPALPPGKQLP

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 BON domains [H]

Homologues:

Organism=Escherichia coli, GI1789540, Length=158, Percent_Identity=37.3417721518987, Blast_Score=85, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007055
- InterPro:   IPR014004 [H]

Pfam domain/function: PF04972 BON [H]

EC number: NA

Molecular weight: Translated: 28754; Mature: 28754

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSSPTFARFRRTVTRTAVLAALAGMTATQLTACFPLFAGAVAGGVALATDRRPTATQT
CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHH
IDRGLQMEAENTLISRYDGRAHVNVTVYNRKVLLTGEAGTEQTKQEIGQYAQKLQNAREV
HHCCCEECHHHHHHHHCCCEEEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
VNEIVVTPESSTFGSRTNDTYITTKVKSVLAGTEGLPWNSIKVTTEAQTVFLLGVVTEAE
HHHHEECCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEEEEECCC
GNRATEAVRTVSGVNKVVKVFDYVTEDERKRLDANATSTNPSTAPDASQGTPTRTQGTPT
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ATQAPAPVTSAAPGVTVSPTTSPALPPGKQLP
CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MKLSSPTFARFRRTVTRTAVLAALAGMTATQLTACFPLFAGAVAGGVALATDRRPTATQT
CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHH
IDRGLQMEAENTLISRYDGRAHVNVTVYNRKVLLTGEAGTEQTKQEIGQYAQKLQNAREV
HHCCCEECHHHHHHHHCCCEEEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
VNEIVVTPESSTFGSRTNDTYITTKVKSVLAGTEGLPWNSIKVTTEAQTVFLLGVVTEAE
HHHHEECCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEEEEECCC
GNRATEAVRTVSGVNKVVKVFDYVTEDERKRLDANATSTNPSTAPDASQGTPTRTQGTPT
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ATQAPAPVTSAAPGVTVSPTTSPALPPGKQLP
CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]