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The map label for this gene is 187930479

Identifier: 187930479

GI number: 187930479

Start: 3578763

End: 3581540

Strand: Reverse

Name: 187930479

Synonym: Rpic_3413

Alternate gene names: NA

Gene position: 3581540-3578763 (Counterclockwise)

Preceding gene: 187930480

Following gene: 187930478

Centisome position: 90.84

GC content: 66.81

Gene sequence:

>2778_bases
ATGCAGGACACGCAGGCAAAGGGCAGCAAGTTATCGTGGCGGTGGCCGATGTGGCCGATGTGGCCGATGTGGCTGGGTGC
CGTGGCGTTGGCGCTCGGCGTTGCGAACGTTCGTGCACAGCAGCCGACGACGTCCGCTTCGGCAGAGCCGCAGATCGCCT
TCTACTACGGCCGCGATGTCCCCGTCGCTGAACTGCAAGCCTTCGACTGGGTCGTGCTGGAGCCGGCCACGGCCGGCAGC
TTCGATCCGAAGCAACCATCGCCCACGCTCTGGTTCGCTCGCGTGGACCTGACGCAGCAGACCGACGCAATGCGCACAAG
CGCCTGGCCTGCCAACGTGATCGACCAGGTCTTTGCGCCGCTGCTCGCGCAGGGCTACGCGGGCTTCCTGCTGGATGGGC
TGGACGCGCTCCAGCGCGGCGCGCCCGATGCCGCCAATGCCGTTGCGGCACTGGTCCAGGCGTTGCATGCGCGTGCACCG
CAGACCAGGCTGCTGGCCGGCGGCACGGCGTGGCTTGAGACGCTCGCGCCGCAGTTGTCCGGCGTGGTGACGGCCGGGCT
GGTGCGCGAGCGCACCGGCGGGGAAGGCTTGCAAGAGGTGACCGATGCCGACCGCGCCGCACGCGTTGCCACGCTGCGCA
AGATCGGTGCGCAGTACCGCATACCCGCCGTCGCACTTGATTACTGCCCCAACTACAACCGTACCTGTCTGCGTGAGACC
GCCAATATGGCGCGCGCTGCAGGCGTGACCAGCTACGCCACCACGCCCGGCGCCGACTTCATCGGCATCGGCCGGCTGGA
AGTGATGCCGCGCCGTGTCCTGCTGGTCGAACCCCAGGAGCCCGGCACCAGCCGCAACACCGCGCCATCGGTGCTCTATC
TGGCCATGCCCATCAACTATCTCGGCTATCGCACCGAATTTGCCGACGCCAACAAGCCGTTGCCGGCCGTGACGCCCGAC
CGCTATGCCGGCGTCGTCACCTGGTTCGACGGCAACGCATCGCGACCGGGCACGTGGTCATCGTGGCTCAGGCGCACGAT
GGGCGCCGGTGTTCGCGTGGCGATGTTCAACCAGTTCGGGCTGAACATGGATGCCACCACGGCGCGGATGCTGGATCTAC
AGACCGTGCCCGGCACGCCGGCGGGGCCGCTTGACATTGTTTTGCGCGATCCCATGGTGGGCTTCGAGTTGCAGCCTCAT
CCCGACCGGCGCATGGCCGTGGGGGTGAAGGTCGACCCCAGCGTCGCGGGGGCGCAGTCGCTGCTGCGGCTCTCCGCCGG
CAGTTACGCCTACGATGCGGCGGCCATCATGCCGTGGGGCGGCTATGTGCTGCAGCCGTTTGGCGTCTTCCGCATGCCCG
ATGTCGACCAGGCGCGCTGGGTGATCCAGCCGCTCGATTTTCTGCGCCGCGCGCTGCAACTGCCCGCCATGCCCGTGCCA
GATACCACGACGGAGAACGGCCGCCGATTGATGACCGTTCATATCGACGGCGACGGATTCGCCTCCCGCACTGAGTTTCC
ACCGAGCGAGTTCTCCGGCCAGGCATTGCTGCGCGAGATCCTCGATCGCTACAAGGTGCCGACCACCGTGTCGATCATCG
AGGGCGAGGTGGCGGTCGACGGCGTGTACCCGAAGCTCACGCCGCAGCTCGAGCCGATCGCGCGCACCCTCTTTGCGCAG
CCCTACGTGGAGCTGGCCAGCCATACGTTCTCGCACCCGTTCAACTGGCTGCGCACCACCAACCCGCCCGATCCGGCCTC
CGCCGCCACGGCCGAAGGCACCGACACCGCCTTCTCGTTGAACATTCCGAATTACCGCTTCAGCTTCGATCGCGAGATCG
CGGGCTCCATCCACTACATCAACACCAAGCTCGCCCCGCCAGGCAAGCAGGTGAAGGTGCTGCTGTGGAGCGGCAACGGC
CAGGTGCCGCCGATTGCCGTGCAAAAGACCGTCGAGGCCGGTGTGCTGAACATGAACGGCGGCGACACCTACATCACGCG
CTCCAACCCGAGCTGGACCGCCGTGGCGCCGCTGGGCGTAGACAAAGGCGATGGCCTCTTCCAGGTATTTGCGCCCGACC
AGAACGAGAACATCTACACCAACCTCTGGCACGGCCCGTATTACGGTTTCTCGCGGGCCATCGAAACGTTCGAGCTGACC
GAAAAGCCTTACCGCTTCAAGCCAATCGGCATTTACTACCACATGTATTCGGGCACCAAGCTGGCCTCGGTGACGGCTCT
GCGGCAGGTGTATGACTGGGCTGTCGCGCAGCCGGTCATGCCGGTCTACGCGTCGGACTACATTCGCAAGGTGCTCGATT
TCCGCACCTACGCTGTAGCCCGCGACGGCGATGCCTGGGTCGTGCGCGGCAATGGCGACCTGCGGACCGTGCGCTGGGCC
GGACCCGGCGTGCCACGCCTTGCCGATGCACGCGACGTGGCCGGCTACGCTGCGGGCCCGGGGGGAACCTATATCCATCT
GGCCAGTGGTTCGGCGCGCTTCGCGCTAGAGAACACCACGCCAACGCAGCCCTACGTGCGCGAGGCCAGCGGCCGGTTGT
CGAACTGGCGGCGCAGTGCGGATGGCCGCTCGCTGTCGGTCGATGTTGCCGGCTATACGCGACCGTTCATCCGCTTTGCC
AATGCAACCCGTTGCCGGGCGACCGTGGACGGCCGCGACGTGACCGCCGTGCACGGGGCTGACTGGCGTATCGAACTGGG
GGCGGGCAACCCCGCCAGGCTCACGCCTCAGCACGTCGAGCTGACCTGCGACAGATGA

Upstream 100 bases:

>100_bases
CCCCAAGGGGCATCGCGGCGGGCACGCCCCGGCCCACAAACATTGCAATCGGATGGCCGCCCGGCACAATGCATGTCGGA
CAGACTTTTCGAGGACCGGG

Downstream 100 bases:

>100_bases
CGTCCGAGATTGCGGAAACTCGTCTGGTCTGCCAGACATAAGGGGCTGCAAAACGTTTGCGCTCAAGCTTTTCTGGGTTG
ATCCGTTGTTAACTTGACTG

Product: hypothetical protein

Products: NA

Alternate protein names: Polysaccharide Deacetylase; Polysaccharide Transport System Component Protein

Number of amino acids: Translated: 925; Mature: 925

Protein sequence:

>925_residues
MQDTQAKGSKLSWRWPMWPMWPMWLGAVALALGVANVRAQQPTTSASAEPQIAFYYGRDVPVAELQAFDWVVLEPATAGS
FDPKQPSPTLWFARVDLTQQTDAMRTSAWPANVIDQVFAPLLAQGYAGFLLDGLDALQRGAPDAANAVAALVQALHARAP
QTRLLAGGTAWLETLAPQLSGVVTAGLVRERTGGEGLQEVTDADRAARVATLRKIGAQYRIPAVALDYCPNYNRTCLRET
ANMARAAGVTSYATTPGADFIGIGRLEVMPRRVLLVEPQEPGTSRNTAPSVLYLAMPINYLGYRTEFADANKPLPAVTPD
RYAGVVTWFDGNASRPGTWSSWLRRTMGAGVRVAMFNQFGLNMDATTARMLDLQTVPGTPAGPLDIVLRDPMVGFELQPH
PDRRMAVGVKVDPSVAGAQSLLRLSAGSYAYDAAAIMPWGGYVLQPFGVFRMPDVDQARWVIQPLDFLRRALQLPAMPVP
DTTTENGRRLMTVHIDGDGFASRTEFPPSEFSGQALLREILDRYKVPTTVSIIEGEVAVDGVYPKLTPQLEPIARTLFAQ
PYVELASHTFSHPFNWLRTTNPPDPASAATAEGTDTAFSLNIPNYRFSFDREIAGSIHYINTKLAPPGKQVKVLLWSGNG
QVPPIAVQKTVEAGVLNMNGGDTYITRSNPSWTAVAPLGVDKGDGLFQVFAPDQNENIYTNLWHGPYYGFSRAIETFELT
EKPYRFKPIGIYYHMYSGTKLASVTALRQVYDWAVAQPVMPVYASDYIRKVLDFRTYAVARDGDAWVVRGNGDLRTVRWA
GPGVPRLADARDVAGYAAGPGGTYIHLASGSARFALENTTPTQPYVREASGRLSNWRRSADGRSLSVDVAGYTRPFIRFA
NATRCRATVDGRDVTAVHGADWRIELGAGNPARLTPQHVELTCDR

Sequences:

>Translated_925_residues
MQDTQAKGSKLSWRWPMWPMWPMWLGAVALALGVANVRAQQPTTSASAEPQIAFYYGRDVPVAELQAFDWVVLEPATAGS
FDPKQPSPTLWFARVDLTQQTDAMRTSAWPANVIDQVFAPLLAQGYAGFLLDGLDALQRGAPDAANAVAALVQALHARAP
QTRLLAGGTAWLETLAPQLSGVVTAGLVRERTGGEGLQEVTDADRAARVATLRKIGAQYRIPAVALDYCPNYNRTCLRET
ANMARAAGVTSYATTPGADFIGIGRLEVMPRRVLLVEPQEPGTSRNTAPSVLYLAMPINYLGYRTEFADANKPLPAVTPD
RYAGVVTWFDGNASRPGTWSSWLRRTMGAGVRVAMFNQFGLNMDATTARMLDLQTVPGTPAGPLDIVLRDPMVGFELQPH
PDRRMAVGVKVDPSVAGAQSLLRLSAGSYAYDAAAIMPWGGYVLQPFGVFRMPDVDQARWVIQPLDFLRRALQLPAMPVP
DTTTENGRRLMTVHIDGDGFASRTEFPPSEFSGQALLREILDRYKVPTTVSIIEGEVAVDGVYPKLTPQLEPIARTLFAQ
PYVELASHTFSHPFNWLRTTNPPDPASAATAEGTDTAFSLNIPNYRFSFDREIAGSIHYINTKLAPPGKQVKVLLWSGNG
QVPPIAVQKTVEAGVLNMNGGDTYITRSNPSWTAVAPLGVDKGDGLFQVFAPDQNENIYTNLWHGPYYGFSRAIETFELT
EKPYRFKPIGIYYHMYSGTKLASVTALRQVYDWAVAQPVMPVYASDYIRKVLDFRTYAVARDGDAWVVRGNGDLRTVRWA
GPGVPRLADARDVAGYAAGPGGTYIHLASGSARFALENTTPTQPYVREASGRLSNWRRSADGRSLSVDVAGYTRPFIRFA
NATRCRATVDGRDVTAVHGADWRIELGAGNPARLTPQHVELTCDR
>Mature_925_residues
MQDTQAKGSKLSWRWPMWPMWPMWLGAVALALGVANVRAQQPTTSASAEPQIAFYYGRDVPVAELQAFDWVVLEPATAGS
FDPKQPSPTLWFARVDLTQQTDAMRTSAWPANVIDQVFAPLLAQGYAGFLLDGLDALQRGAPDAANAVAALVQALHARAP
QTRLLAGGTAWLETLAPQLSGVVTAGLVRERTGGEGLQEVTDADRAARVATLRKIGAQYRIPAVALDYCPNYNRTCLRET
ANMARAAGVTSYATTPGADFIGIGRLEVMPRRVLLVEPQEPGTSRNTAPSVLYLAMPINYLGYRTEFADANKPLPAVTPD
RYAGVVTWFDGNASRPGTWSSWLRRTMGAGVRVAMFNQFGLNMDATTARMLDLQTVPGTPAGPLDIVLRDPMVGFELQPH
PDRRMAVGVKVDPSVAGAQSLLRLSAGSYAYDAAAIMPWGGYVLQPFGVFRMPDVDQARWVIQPLDFLRRALQLPAMPVP
DTTTENGRRLMTVHIDGDGFASRTEFPPSEFSGQALLREILDRYKVPTTVSIIEGEVAVDGVYPKLTPQLEPIARTLFAQ
PYVELASHTFSHPFNWLRTTNPPDPASAATAEGTDTAFSLNIPNYRFSFDREIAGSIHYINTKLAPPGKQVKVLLWSGNG
QVPPIAVQKTVEAGVLNMNGGDTYITRSNPSWTAVAPLGVDKGDGLFQVFAPDQNENIYTNLWHGPYYGFSRAIETFELT
EKPYRFKPIGIYYHMYSGTKLASVTALRQVYDWAVAQPVMPVYASDYIRKVLDFRTYAVARDGDAWVVRGNGDLRTVRWA
GPGVPRLADARDVAGYAAGPGGTYIHLASGSARFALENTTPTQPYVREASGRLSNWRRSADGRSLSVDVAGYTRPFIRFA
NATRCRATVDGRDVTAVHGADWRIELGAGNPARLTPQHVELTCDR

Specific function: Unknown

COG id: COG3868

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 101084; Mature: 101084

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDTQAKGSKLSWRWPMWPMWPMWLGAVALALGVANVRAQQPTTSASAEPQIAFYYGRDV
CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCC
PVAELQAFDWVVLEPATAGSFDPKQPSPTLWFARVDLTQQTDAMRTSAWPANVIDQVFAP
CHHHHHHCCEEEECCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHCCCCCHHHHHHHHHH
LLAQGYAGFLLDGLDALQRGAPDAANAVAALVQALHARAPQTRLLAGGTAWLETLAPQLS
HHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHH
GVVTAGLVRERTGGEGLQEVTDADRAARVATLRKIGAQYRIPAVALDYCPNYNRTCLRET
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHH
ANMARAAGVTSYATTPGADFIGIGRLEVMPRRVLLVEPQEPGTSRNTAPSVLYLAMPINY
HHHHHHCCCCCCCCCCCCCEEECCCEEECCCEEEEECCCCCCCCCCCCCCEEEEEECHHH
LGYRTEFADANKPLPAVTPDRYAGVVTWFDGNASRPGTWSSWLRRTMGAGVRVAMFNQFG
HCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEECCCC
LNMDATTARMLDLQTVPGTPAGPLDIVLRDPMVGFELQPHPDRRMAVGVKVDPSVAGAQS
CCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCEECCCCCCEEEEEEEECCCHHHHHH
LLRLSAGSYAYDAAAIMPWGGYVLQPFGVFRMPDVDQARWVIQPLDFLRRALQLPAMPVP
HHHHCCCCCEECCEEEECCCCEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
DTTTENGRRLMTVHIDGDGFASRTEFPPSEFSGQALLREILDRYKVPTTVSIIEGEVAVD
CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCEEEC
GVYPKLTPQLEPIARTLFAQPYVELASHTFSHPFNWLRTTNPPDPASAATAEGTDTAFSL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
NIPNYRFSFDREIAGSIHYINTKLAPPGKQVKVLLWSGNGQVPPIAVQKTVEAGVLNMNG
ECCCEEEECCHHHCCEEEEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHCCCEEECCC
GDTYITRSNPSWTAVAPLGVDKGDGLFQVFAPDQNENIYTNLWHGPYYGFSRAIETFELT
CCEEEECCCCCEEEEEECCCCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHC
EKPYRFKPIGIYYHMYSGTKLASVTALRQVYDWAVAQPVMPVYASDYIRKVLDFRTYAVA
CCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEE
RDGDAWVVRGNGDLRTVRWAGPGVPRLADARDVAGYAAGPGGTYIHLASGSARFALENTT
ECCCEEEEECCCCEEEEEECCCCCCCCCCCHHCCCCCCCCCCCEEEEECCCEEEEECCCC
PTQPYVREASGRLSNWRRSADGRSLSVDVAGYTRPFIRFANATRCRATVDGRDVTAVHGA
CCCHHHHHHCCHHHHHHHCCCCCEEEEEECCCCCHHHHHCCCCEEEEEECCCEEEEEECC
DWRIELGAGNPARLTPQHVELTCDR
CEEEEECCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MQDTQAKGSKLSWRWPMWPMWPMWLGAVALALGVANVRAQQPTTSASAEPQIAFYYGRDV
CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCC
PVAELQAFDWVVLEPATAGSFDPKQPSPTLWFARVDLTQQTDAMRTSAWPANVIDQVFAP
CHHHHHHCCEEEECCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHCCCCCHHHHHHHHHH
LLAQGYAGFLLDGLDALQRGAPDAANAVAALVQALHARAPQTRLLAGGTAWLETLAPQLS
HHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHH
GVVTAGLVRERTGGEGLQEVTDADRAARVATLRKIGAQYRIPAVALDYCPNYNRTCLRET
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHH
ANMARAAGVTSYATTPGADFIGIGRLEVMPRRVLLVEPQEPGTSRNTAPSVLYLAMPINY
HHHHHHCCCCCCCCCCCCCEEECCCEEECCCEEEEECCCCCCCCCCCCCCEEEEEECHHH
LGYRTEFADANKPLPAVTPDRYAGVVTWFDGNASRPGTWSSWLRRTMGAGVRVAMFNQFG
HCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEECCCC
LNMDATTARMLDLQTVPGTPAGPLDIVLRDPMVGFELQPHPDRRMAVGVKVDPSVAGAQS
CCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCEECCCCCCEEEEEEEECCCHHHHHH
LLRLSAGSYAYDAAAIMPWGGYVLQPFGVFRMPDVDQARWVIQPLDFLRRALQLPAMPVP
HHHHCCCCCEECCEEEECCCCEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
DTTTENGRRLMTVHIDGDGFASRTEFPPSEFSGQALLREILDRYKVPTTVSIIEGEVAVD
CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCEEEC
GVYPKLTPQLEPIARTLFAQPYVELASHTFSHPFNWLRTTNPPDPASAATAEGTDTAFSL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
NIPNYRFSFDREIAGSIHYINTKLAPPGKQVKVLLWSGNGQVPPIAVQKTVEAGVLNMNG
ECCCEEEECCHHHCCEEEEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHCCCEEECCC
GDTYITRSNPSWTAVAPLGVDKGDGLFQVFAPDQNENIYTNLWHGPYYGFSRAIETFELT
CCEEEECCCCCEEEEEECCCCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHC
EKPYRFKPIGIYYHMYSGTKLASVTALRQVYDWAVAQPVMPVYASDYIRKVLDFRTYAVA
CCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEE
RDGDAWVVRGNGDLRTVRWAGPGVPRLADARDVAGYAAGPGGTYIHLASGSARFALENTT
ECCCEEEEECCCCEEEEEECCCCCCCCCCCHHCCCCCCCCCCCEEEEECCCEEEEECCCC
PTQPYVREASGRLSNWRRSADGRSLSVDVAGYTRPFIRFANATRCRATVDGRDVTAVHGA
CCCHHHHHHCCHHHHHHHCCCCCEEEEEECCCCCHHHHHCCCCEEEEEECCCEEEEEECC
DWRIELGAGNPARLTPQHVELTCDR
CEEEEECCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA