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The map label for this gene is yfaP [H]

Identifier: 187930375

GI number: 187930375

Start: 3446288

End: 3447091

Strand: Reverse

Name: yfaP [H]

Synonym: Rpic_3308

Alternate gene names: 187930375

Gene position: 3447091-3446288 (Counterclockwise)

Preceding gene: 187930376

Following gene: 187930374

Centisome position: 87.43

GC content: 66.67

Gene sequence:

>804_bases
GTGAAGAGTGGGATGACGCGCTTGGCGCTGTGCACTGTCGCGCTGCTGCTGGCCGCTTCGGCGCTGGCTGAGCCGGTGGC
CGATCTGGAAGGGCCGATCGGCGGCTGGCGCAACAGCAAGCTGACCAACGAGCTGGAACAGTACACCGCGGCGTATCCGA
AACCCCCCGTGGACCGTGGCGCGCAAAAGTACCGCACGCTCATCGCCGGGCGCATCCGCGCGGCCGGCAAGCAGCGCCGC
CCGCCGGTGCTCGTCGTCAACGGCAACGCCATGCCGCTGTATGGCGATGGCGAAGGCCGTTTTGCGCGCCCCTGGGCGTT
CGGCCCCGGCTCGAACAGCGTCGAAATCGTCGGCGCCGACGGGCAGTCACGCCAACGCCTGCAGTTCTACGAGGCCGACA
CCACCAAGACATCGGCCAAGCTGCGCGCCGTCCTCACGTGGGACGACCCGCGCGCCGAGGTCGACATGCACGTCATTTCG
CCGATTGGCGACCACGCGTTCTGGGCGCAGCCGCTGCTGTCCGACGGCGGCGGCCTCGACGTGGACAGCGTCGACGGTGC
CGGGCCGGAGATTTTCTCGACCGCCGCGCCACGCCCGGGCGTGTGGCTGTTCTACGTGAACTATTGGGGCAACTTCAACG
CCGGCGGCTACAACTTCGACGAAAAGGCACATGACCGGGATCTCATCACCGCACAATTGACGCTGATCTATAACGAGAAC
ACGCCCAACGAGCGGCGCGAGTTCGTCAGTGTGCCGCTGCGCAAGATCGGCGAGCTGGCGCTGATGAAATCGATCCGCTT
CTGA

Upstream 100 bases:

>100_bases
ACGAGTATCTGCACCTCGCCTTTGCGCGCCACCCGCGCGGGCAGGACGAACAGTTTGTCGAGGCGATGGCGCGTCGCCTG
ATTCGAGGGGAGGGTTTGCT

Downstream 100 bases:

>100_bases
CGTGACGCACATGATGCCTTCCACTTTCCGTCTCGCCGCTGCCATCGCGCTGGCCGCGTTTGCGGCCGCTGGGAGCGTGC
TTGCGCAAACCGACGCCGGC

Product: putative signal peptide protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MKSGMTRLALCTVALLLAASALAEPVADLEGPIGGWRNSKLTNELEQYTAAYPKPPVDRGAQKYRTLIAGRIRAAGKQRR
PPVLVVNGNAMPLYGDGEGRFARPWAFGPGSNSVEIVGADGQSRQRLQFYEADTTKTSAKLRAVLTWDDPRAEVDMHVIS
PIGDHAFWAQPLLSDGGGLDVDSVDGAGPEIFSTAAPRPGVWLFYVNYWGNFNAGGYNFDEKAHDRDLITAQLTLIYNEN
TPNERREFVSVPLRKIGELALMKSIRF

Sequences:

>Translated_267_residues
MKSGMTRLALCTVALLLAASALAEPVADLEGPIGGWRNSKLTNELEQYTAAYPKPPVDRGAQKYRTLIAGRIRAAGKQRR
PPVLVVNGNAMPLYGDGEGRFARPWAFGPGSNSVEIVGADGQSRQRLQFYEADTTKTSAKLRAVLTWDDPRAEVDMHVIS
PIGDHAFWAQPLLSDGGGLDVDSVDGAGPEIFSTAAPRPGVWLFYVNYWGNFNAGGYNFDEKAHDRDLITAQLTLIYNEN
TPNERREFVSVPLRKIGELALMKSIRF
>Mature_267_residues
MKSGMTRLALCTVALLLAASALAEPVADLEGPIGGWRNSKLTNELEQYTAAYPKPPVDRGAQKYRTLIAGRIRAAGKQRR
PPVLVVNGNAMPLYGDGEGRFARPWAFGPGSNSVEIVGADGQSRQRLQFYEADTTKTSAKLRAVLTWDDPRAEVDMHVIS
PIGDHAFWAQPLLSDGGGLDVDSVDGAGPEIFSTAAPRPGVWLFYVNYWGNFNAGGYNFDEKAHDRDLITAQLTLIYNEN
TPNERREFVSVPLRKIGELALMKSIRF

Specific function: Unknown

COG id: COG4676

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788556, Length=263, Percent_Identity=38.7832699619772, Blast_Score=174, Evalue=5e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019220
- InterPro:   IPR012039 [H]

Pfam domain/function: PF09906 DUF2135 [H]

EC number: NA

Molecular weight: Translated: 29264; Mature: 29264

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSGMTRLALCTVALLLAASALAEPVADLEGPIGGWRNSKLTNELEQYTAAYPKPPVDRG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHH
AQKYRTLIAGRIRAAGKQRRPPVLVVNGNAMPLYGDGEGRFARPWAFGPGSNSVEIVGAD
HHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEECCCCCEECCEECCCCCCCEEEEECC
GQSRQRLQFYEADTTKTSAKLRAVLTWDDPRAEVDMHVISPIGDHAFWAQPLLSDGGGLD
CCCCCEEEEEECCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCC
VDSVDGAGPEIFSTAAPRPGVWLFYVNYWGNFNAGGYNFDEKAHDRDLITAQLTLIYNEN
CCCCCCCCCHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC
TPNERREFVSVPLRKIGELALMKSIRF
CCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSGMTRLALCTVALLLAASALAEPVADLEGPIGGWRNSKLTNELEQYTAAYPKPPVDRG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHH
AQKYRTLIAGRIRAAGKQRRPPVLVVNGNAMPLYGDGEGRFARPWAFGPGSNSVEIVGAD
HHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEECCCCCEECCEECCCCCCCEEEEECC
GQSRQRLQFYEADTTKTSAKLRAVLTWDDPRAEVDMHVISPIGDHAFWAQPLLSDGGGLD
CCCCCEEEEEECCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCC
VDSVDGAGPEIFSTAAPRPGVWLFYVNYWGNFNAGGYNFDEKAHDRDLITAQLTLIYNEN
CCCCCCCCCHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC
TPNERREFVSVPLRKIGELALMKSIRF
CCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]