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The map label for this gene is yfaQ [H]

Identifier: 187930376

GI number: 187930376

Start: 3447088

End: 3448809

Strand: Reverse

Name: yfaQ [H]

Synonym: Rpic_3309

Alternate gene names: 187930376

Gene position: 3448809-3447088 (Counterclockwise)

Preceding gene: 187930377

Following gene: 187930375

Centisome position: 87.48

GC content: 70.21

Gene sequence:

>1722_bases
ATGCCTTCCCGCCTGCTCGCGCGCAGTGTGCTGACCGGCGTCCTCTGGGCCGCCGGCGCCTGCGCGCTTGCCGGGTACGC
CATCGCTGCGCCGGTGGGCCAGTCACTTCCATCGTTGCGATATGCAGCGTTGCAAGGCGATGACGCCAAGCTATGGCAAT
TCAGCGTTGACCCCGCCGGCGGCGTGCCGCAGGCCACCGCGTTGCCGCGCGACACCGAAACACCGCTCGGCAGCGTCTGG
AAGCTCTTCGTCTACAGCTATCTCGTCTCGCGGCGCATCAACACGCCCGACTACACGTGTCACGGCAACGACGCCGAAGA
GGTCTACTGCTGCACCGCCGGCAACAGCATCGACCGCGAGCGCGCGCTCATCCAATCGTGCGGACGCTATTTCGAACCGG
TGCGCCTCGGGCTGGACCGCGCGGACTGGCGCCGTTTCTGGCAGCAGGCCGGATCGCCCGCGTGGCTGCGTGATCTGCGT
GCCATGCAGCCGACGCATCGCGTGCCGGTCGCCGATCTGCTCACCGCGCTGCGCAGCGTTCCGGCCGATGGGCGCGAAAC
TGCCGCGCAAACGCTCGTCTCTGTGCTGACCGTCGGGCGTGGCGAGGGCACGGTGTCGGACTTCGGCGGCCTGCTGCGCG
CCAAGACGTGGACGATGCCCGACCCGCAGCACCCCGGCGCGTCGATCGGCGGCGCCGCGGGCTGGCTGGTCGACGGCACG
CCCGTCTGGCTCGGCGGTGCCGGGTCGAGCAACCAGGTGCTGGCCGCTGCCGCCCCGCGCCTTACGCCGCTGATCGAGCA
GACGCCCGTGCCCGACGACGATGCCTGTGTCGTGGTGGATTTCTTCGCGCGTTACCCGATTCGCGAAGTGCGCGACGCCA
GCGGCAAGCCGGTCGCCGCCGGTCGCCTGGAAGGCCGCTACGCCGTGCGCTTCGTCAACGGCAACACGCTGCCCATCGAG
AGCAAGGGGGAGCTGACGCTCGCGCGCCAGAACAACGTGCCGGTCATTACCGGCCGCCTGGGCATGAACGATTACGTGGC
ACGGGTGGTTGAGCGCGAAGGCGAACTCGCCGAGCCCCAGGCAGCGCGTGCGTTGGCCGTGGCGGCGCGCAGCTACCTCG
TGCAGCACGCCTCGCGCGACAGGGGCTGCTACCGAATCGCCGACAGCTCGCGCACCCAGCGTGTGCTGCCGCGCCCGCCG
ATGGCCGCCGCACGCAACGCAGCCGAATTTACCGACACGCTGGTATTGGCGGGCCAGTCCGTGCAATACCACGGCACCAT
CAGCGCGCGCGGCCAGATGAGCTGGACCGCCGCGCGCGCCGCTGCTCAGCGCGGCCAGGGGTTCGACGCCATCCTCGCGC
AGTGGTGGCCGCAGGCGACGCTCACGTCATTTCAGAGCCCGGTGGCTGGGGATTGTTCACCCGTGGCAGGGGCACAGCAG
TGGCTCCAGGCGCGTGCGCCCGGTTGGTCCGCGCGTCTTCGCGCAGAGGCGGGCTATGAGACGCCGCCGCTGCCCGCCGT
GTGCGTCGTGCACGAGGGCCGGCCGTATGCCGATGCGCGCCGCAACCGGCTGTACGTGCACCGCCTTGCGACCGAGGAAG
ACCGCATCGCGCTGACGCACGAGTATCTGCACCTCGCCTTTGCGCGCCACCCGCGCGGGCAGGACGAACAGTTTGTCGAG
GCGATGGCGCGTCGCCTGATTCGAGGGGAGGGTTTGCTGTGA

Upstream 100 bases:

>100_bases
CCGCCGGTGCGCTACTTCCGCATGTACCAGCCGGAAGCCAAGGCGTTCCAGGGCGACGGCAAGACCGCCAGCTATCCGTT
CAAGGTGGAGTGATCTGGCG

Downstream 100 bases:

>100_bases
AGAGTGGGATGACGCGCTTGGCGCTGTGCACTGTCGCGCTGCTGCTGGCCGCTTCGGCGCTGGCTGAGCCGGTGGCCGAT
CTGGAAGGGCCGATCGGCGG

Product: putative signal peptide protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 573; Mature: 572

Protein sequence:

>573_residues
MPSRLLARSVLTGVLWAAGACALAGYAIAAPVGQSLPSLRYAALQGDDAKLWQFSVDPAGGVPQATALPRDTETPLGSVW
KLFVYSYLVSRRINTPDYTCHGNDAEEVYCCTAGNSIDRERALIQSCGRYFEPVRLGLDRADWRRFWQQAGSPAWLRDLR
AMQPTHRVPVADLLTALRSVPADGRETAAQTLVSVLTVGRGEGTVSDFGGLLRAKTWTMPDPQHPGASIGGAAGWLVDGT
PVWLGGAGSSNQVLAAAAPRLTPLIEQTPVPDDDACVVVDFFARYPIREVRDASGKPVAAGRLEGRYAVRFVNGNTLPIE
SKGELTLARQNNVPVITGRLGMNDYVARVVEREGELAEPQAARALAVAARSYLVQHASRDRGCYRIADSSRTQRVLPRPP
MAAARNAAEFTDTLVLAGQSVQYHGTISARGQMSWTAARAAAQRGQGFDAILAQWWPQATLTSFQSPVAGDCSPVAGAQQ
WLQARAPGWSARLRAEAGYETPPLPAVCVVHEGRPYADARRNRLYVHRLATEEDRIALTHEYLHLAFARHPRGQDEQFVE
AMARRLIRGEGLL

Sequences:

>Translated_573_residues
MPSRLLARSVLTGVLWAAGACALAGYAIAAPVGQSLPSLRYAALQGDDAKLWQFSVDPAGGVPQATALPRDTETPLGSVW
KLFVYSYLVSRRINTPDYTCHGNDAEEVYCCTAGNSIDRERALIQSCGRYFEPVRLGLDRADWRRFWQQAGSPAWLRDLR
AMQPTHRVPVADLLTALRSVPADGRETAAQTLVSVLTVGRGEGTVSDFGGLLRAKTWTMPDPQHPGASIGGAAGWLVDGT
PVWLGGAGSSNQVLAAAAPRLTPLIEQTPVPDDDACVVVDFFARYPIREVRDASGKPVAAGRLEGRYAVRFVNGNTLPIE
SKGELTLARQNNVPVITGRLGMNDYVARVVEREGELAEPQAARALAVAARSYLVQHASRDRGCYRIADSSRTQRVLPRPP
MAAARNAAEFTDTLVLAGQSVQYHGTISARGQMSWTAARAAAQRGQGFDAILAQWWPQATLTSFQSPVAGDCSPVAGAQQ
WLQARAPGWSARLRAEAGYETPPLPAVCVVHEGRPYADARRNRLYVHRLATEEDRIALTHEYLHLAFARHPRGQDEQFVE
AMARRLIRGEGLL
>Mature_572_residues
PSRLLARSVLTGVLWAAGACALAGYAIAAPVGQSLPSLRYAALQGDDAKLWQFSVDPAGGVPQATALPRDTETPLGSVWK
LFVYSYLVSRRINTPDYTCHGNDAEEVYCCTAGNSIDRERALIQSCGRYFEPVRLGLDRADWRRFWQQAGSPAWLRDLRA
MQPTHRVPVADLLTALRSVPADGRETAAQTLVSVLTVGRGEGTVSDFGGLLRAKTWTMPDPQHPGASIGGAAGWLVDGTP
VWLGGAGSSNQVLAAAAPRLTPLIEQTPVPDDDACVVVDFFARYPIREVRDASGKPVAAGRLEGRYAVRFVNGNTLPIES
KGELTLARQNNVPVITGRLGMNDYVARVVEREGELAEPQAARALAVAARSYLVQHASRDRGCYRIADSSRTQRVLPRPPM
AAARNAAEFTDTLVLAGQSVQYHGTISARGQMSWTAARAAAQRGQGFDAILAQWWPQATLTSFQSPVAGDCSPVAGAQQW
LQARAPGWSARLRAEAGYETPPLPAVCVVHEGRPYADARRNRLYVHRLATEEDRIALTHEYLHLAFARHPRGQDEQFVEA
MARRLIRGEGLL

Specific function: Unknown

COG id: COG5445

COG function: function code S; Predicted secreted protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788557, Length=522, Percent_Identity=40.6130268199234, Blast_Score=385, Evalue=1e-108,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018748
- InterPro:   IPR013693 [H]

Pfam domain/function: PF10062 DUF2300; PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 62170; Mature: 62039

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSRLLARSVLTGVLWAAGACALAGYAIAAPVGQSLPSLRYAALQGDDAKLWQFSVDPAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEECCCCC
GVPQATALPRDTETPLGSVWKLFVYSYLVSRRINTPDYTCHGNDAEEVYCCTAGNSIDRE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCEEEEEECCCCCHHH
RALIQSCGRYFEPVRLGLDRADWRRFWQQAGSPAWLRDLRAMQPTHRVPVADLLTALRSV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHC
PADGRETAAQTLVSVLTVGRGEGTVSDFGGLLRAKTWTMPDPQHPGASIGGAAGWLVDGT
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCC
PVWLGGAGSSNQVLAAAAPRLTPLIEQTPVPDDDACVVVDFFARYPIREVRDASGKPVAA
EEEEECCCCCCCEEEECCCCCCHHHHCCCCCCCCCEEEEEHHHHCCHHHHHCCCCCCEEE
GRLEGRYAVRFVNGNTLPIESKGELTLARQNNVPVITGRLGMNDYVARVVEREGELAEPQ
CCCCCEEEEEEECCCEECCCCCCCEEEEECCCCCEEEECCCCHHHHHHHHHHCCCCCCCH
AARALAVAARSYLVQHASRDRGCYRIADSSRTQRVLPRPPMAAARNAAEFTDTLVLAGQS
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHCCHHHHHHHHEEECCC
VQYHGTISARGQMSWTAARAAAQRGQGFDAILAQWWPQATLTSFQSPVAGDCSPVAGAQQ
EEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHH
WLQARAPGWSARLRAEAGYETPPLPAVCVVHEGRPYADARRNRLYVHRLATEEDRIALTH
HHHHCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCHHHHHCEEEEEEECCCCCCEEHHH
EYLHLAFARHPRGQDEQFVEAMARRLIRGEGLL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PSRLLARSVLTGVLWAAGACALAGYAIAAPVGQSLPSLRYAALQGDDAKLWQFSVDPAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEECCCCC
GVPQATALPRDTETPLGSVWKLFVYSYLVSRRINTPDYTCHGNDAEEVYCCTAGNSIDRE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCEEEEEECCCCCHHH
RALIQSCGRYFEPVRLGLDRADWRRFWQQAGSPAWLRDLRAMQPTHRVPVADLLTALRSV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHC
PADGRETAAQTLVSVLTVGRGEGTVSDFGGLLRAKTWTMPDPQHPGASIGGAAGWLVDGT
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCC
PVWLGGAGSSNQVLAAAAPRLTPLIEQTPVPDDDACVVVDFFARYPIREVRDASGKPVAA
EEEEECCCCCCCEEEECCCCCCHHHHCCCCCCCCCEEEEEHHHHCCHHHHHCCCCCCEEE
GRLEGRYAVRFVNGNTLPIESKGELTLARQNNVPVITGRLGMNDYVARVVEREGELAEPQ
CCCCCEEEEEEECCCEECCCCCCCEEEEECCCCCEEEECCCCHHHHHHHHHHCCCCCCCH
AARALAVAARSYLVQHASRDRGCYRIADSSRTQRVLPRPPMAAARNAAEFTDTLVLAGQS
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHCCHHHHHHHHEEECCC
VQYHGTISARGQMSWTAARAAAQRGQGFDAILAQWWPQATLTSFQSPVAGDCSPVAGAQQ
EEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHH
WLQARAPGWSARLRAEAGYETPPLPAVCVVHEGRPYADARRNRLYVHRLATEEDRIALTH
HHHHCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCHHHHHCEEEEEEECCCCCCEEHHH
EYLHLAFARHPRGQDEQFVEAMARRLIRGEGLL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]