| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is hisI
Identifier: 187930289
GI number: 187930289
Start: 3370212
End: 3370634
Strand: Reverse
Name: hisI
Synonym: Rpic_3222
Alternate gene names: 187930289
Gene position: 3370634-3370212 (Counterclockwise)
Preceding gene: 187930290
Following gene: 187930288
Centisome position: 85.49
GC content: 60.99
Gene sequence:
>423_bases ATGAGCAAGAAGTGGCTGAACAAGGTCCACTGGGACGACAACGGCCTGGTGCCGGTGATCGTGCAGGAGCAGGGCAGCAA TGACGTCCTGATGTTCGCGTTCATGAACCGCGAGGCGCTGCAGAAGACGGTTGAAAGCGGCGAGGCCGTGTTCTGGTCGC GCTCGCGCAAGCGCCTGTGGCACAAGGGCGAGGAGTCCGGCCACATCCAGAAGGTGCACGAGATCCGCCTCGACTGCGAT GAAGACGTGATCTTGCTCCGCGTCACACAAATCGGCGGCATCGCCTGCCATACTGGCCGCCACGCGTGCTTTTTCCAGAA GTTCGAAGGCAATGTGGAAGACGGCGATTGGCACACCGTCGAGCCGGTGCTCAAGAACCCCGACGACATTTACGCCGGCA AGCCCGGCCACAATCATGAGTGA
Upstream 100 bases:
>100_bases ATGCGGTGCTGGCCGCCAGCATCTTCCACTACGGCGAATACACCGTTGGCCAGGCCAAGCAATTCATGGCAGAGCAAGGC ATTCCAGTACGGATCGGATC
Downstream 100 bases:
>100_bases CACCCTGCGCCGCCTGGGCGAGGTGCTCGAATCCCGCAAGCTCGCCAACGGCGGTGACCCGGAAAAGAGCTACATCGCGC GCCTGTTCAACAAGGGCGAC
Product: phosphoribosyl-AMP cyclohydrolase
Products: NA
Alternate protein names: PRA-CH
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MSKKWLNKVHWDDNGLVPVIVQEQGSNDVLMFAFMNREALQKTVESGEAVFWSRSRKRLWHKGEESGHIQKVHEIRLDCD EDVILLRVTQIGGIACHTGRHACFFQKFEGNVEDGDWHTVEPVLKNPDDIYAGKPGHNHE
Sequences:
>Translated_140_residues MSKKWLNKVHWDDNGLVPVIVQEQGSNDVLMFAFMNREALQKTVESGEAVFWSRSRKRLWHKGEESGHIQKVHEIRLDCD EDVILLRVTQIGGIACHTGRHACFFQKFEGNVEDGDWHTVEPVLKNPDDIYAGKPGHNHE >Mature_139_residues SKKWLNKVHWDDNGLVPVIVQEQGSNDVLMFAFMNREALQKTVESGEAVFWSRSRKRLWHKGEESGHIQKVHEIRLDCDE DVILLRVTQIGGIACHTGRHACFFQKFEGNVEDGDWHTVEPVLKNPDDIYAGKPGHNHE
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0139
COG function: function code E; Phosphoribosyl-AMP cyclohydrolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PRA-CH family
Homologues:
Organism=Escherichia coli, GI2367128, Length=91, Percent_Identity=50.5494505494505, Blast_Score=97, Evalue=5e-22, Organism=Saccharomyces cerevisiae, GI6319819, Length=105, Percent_Identity=33.3333333333333, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS3_RALPJ (B2UEE4)
Other databases:
- EMBL: CP001068 - RefSeq: YP_001900776.1 - ProteinModelPortal: B2UEE4 - SMR: B2UEE4 - GeneID: 6286063 - GenomeReviews: CP001068_GR - KEGG: rpi:Rpic_3222 - HOGENOM: HBG294308 - OMA: LWLKGES - ProtClustDB: PRK00051 - GO: GO:0005737 - HAMAP: MF_01021 - InterPro: IPR002496 - ProDom: PD002610
Pfam domain/function: PF01502 PRA-CH
EC number: =3.5.4.19
Molecular weight: Translated: 16101; Mature: 15970
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKWLNKVHWDDNGLVPVIVQEQGSNDVLMFAFMNREALQKTVESGEAVFWSRSRKRLW CCCCCCCEEEECCCCEEEEEEECCCCCCEEEEEECCHHHHHHHHHCCCEEEEECHHHHHH HKGEESGHIQKVHEIRLDCDEDVILLRVTQIGGIACHTGRHACFFQKFEGNVEDGDWHTV CCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEECCCCEEEEEECCCCCCCCCCEEE EPVLKNPDDIYAGKPGHNHE CHHHCCCCCEECCCCCCCCC >Mature Secondary Structure SKKWLNKVHWDDNGLVPVIVQEQGSNDVLMFAFMNREALQKTVESGEAVFWSRSRKRLW CCCCCCEEEECCCCEEEEEEECCCCCCEEEEEECCHHHHHHHHHCCCEEEEECHHHHHH HKGEESGHIQKVHEIRLDCDEDVILLRVTQIGGIACHTGRHACFFQKFEGNVEDGDWHTV CCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEECCCCEEEEEECCCCCCCCCCEEE EPVLKNPDDIYAGKPGHNHE CHHHCCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA