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The map label for this gene is 187930242

Identifier: 187930242

GI number: 187930242

Start: 3328351

End: 3330255

Strand: Reverse

Name: 187930242

Synonym: Rpic_3175

Alternate gene names: NA

Gene position: 3330255-3328351 (Counterclockwise)

Preceding gene: 187930243

Following gene: 187930241

Centisome position: 84.47

GC content: 57.22

Gene sequence:

>1905_bases
ATGAAGCTCCAAACGATTCGGCTATCCAACTTCCAGTCTTTCGGTGAGGCACCAACCGAAGTCGTGCTTGAAGACATCAC
CTACCTCATCGGGCCCAATGGATCGGGGAAAACAGCCGCGCTTCAGGCCTTGTGCCGGCTCTTTGCCTTCGATCCATCAC
TGCGCCGGATCCTGCGCTCTGACTTTTACGTCCCATTCAATGAGGAAGCCCCGCCGGCTGAGCGTCAGCTCTGGGTAGAG
GCTGACTTCCTGTTCCCAGAACTCGGCGAAGACGAGGACAACAGCACTGTTGCGCCTCATTTTGGCCACATGCGCCTCGA
CGAAGTTGATGGCACGCCGCGTGTGCGTTTTCGCCTCACCGCCACCATGGGGCTGGATGGAGACATAGAGGAAAGCTTGG
TCTATGTGCTGGACATCAATCCTGACGGCTCGCCATTGACCACCGCACAGGTGCTCAGATCTGAGCGCAACCATATCCAC
GTCCACTATCTGCCCGCCCGGCGTGACCCCGCGGATCACATTGCCTACGGCGCCAATGCTTTGCTTGGGCGCATGCTGCG
TGCAGTGAACTGGGATGCAGAGCGGAGTGTCATCAAGGGCCTCACCGACCAAATCAGCGACAGCTTGGCGGCCAACCCGT
CAATCAATGCGTTCAGCACAAGCTTGAAAACGGCATGGGGTGGTTTGCACAAGGGCAGCTTCTTTGCCGATCCGAAGCTC
ACTTTTGTAGCGTCTGAGATCGAGGCCTTGTTAAGGCACATGTCGGTCTCTTTCACCCCTGGTCACGATGAGCAGCTGGT
TGACTTCTCACGACTGAGCGACGGCCAGAAATCGATGCTGTATCTGTCGCTCGTGTTGTCTTCACAGGCCATCGGTCGAG
CTGTCCTGGCTGCAGAAGACAAGTCATTCGACGCAGATAAGTTGCGCCCACCCGTCTTCACGGTGGTAGCGGTCGAAGAG
CCAGAAAACAGCCTGTCGCCGCATTACCTTGGACGGATCGTCAATGCCCTCAACGGGATGACCGGCAACGGCGACGCACA
AGCGCTGATCGCCACCCATGCCCCGTCGATGCTGCGGCGCGTCGACCCAGAACGTATCCGGTATCTGCGTCTAACCCAAG
AACGAACATCGCGCGTCACGCATATCCAGCTGCCAGACACCACAGATGAAGCTCACAAGTTTGTGCGTGAGGCCGTGCAG
GCCTTTCCGGAAGTCTATTTCTCGCGACTCGTGGTACTTGGCGAGGGAGACAGTGAAGAAATCGTGTTGCCACGCCTCCT
ACAGGCCAAAGGGGCACCGGTTGATGAGTCAGCAGTCTCGATAGCGCCCTTGGGTGGACGTCACGTTAATCATTTCTGGC
GCCTACTGTCTGCCCTACAGATTCCCTATCTGACGCTGCTTGATCTGGATGTCGCCCGCTACCAGGCCGGGTGGGGGCGA
ATCAAGTACGCCAATAACCAGTTGGCAGCGTACGAGCCGAGTAAGGTACTTCCCGCAGACCATGGCATTCCCAGTTGGAA
TGATGCAACTCACAAAGTCCGAGCCTATGGGCACTACAACACTCTGCTCGAAGAGCGTGGTGTGTATTTCTCGTTCCCTA
TGGACCTGGATTTTTCGATGCTGCTCGCCTACCCGGATGCCTACGGTGTGGAGAAGGAAAAGCCTGACGAGTCAACGATT
AAGGCCGTGCTAGGGAAAAGCCATTACGACGCAAGCCAATACAACGAGGACGAACAAAAACTGTTCGGCACTTACCACCG
TAGCTTCAAGCTTGGCAGCAAGCCGGCCGCGCACATTGATGCGCTCGCCAAGCTCAGCGATGCGGACCTGCTCGCGAACA
TGCCCGAATCACTTGGACGCTTGGCCGATGCCGTCATCGCCAAGCTCGCGGAGTTGCCGGAGTGA

Upstream 100 bases:

>100_bases
CTGCCTGGGATAAATGGCAAACGGATGGGCGCACCTTCTGGCAACAGATGGACACGTTGGTGGAAACGCTGGATGGGCTT
TCCAAGGCTGAGGATATGCA

Downstream 100 bases:

>100_bases
TAGCCGTCGATGCCTGGCAGCCCGCAGATGGGCTGACGCTTGAACCCAACGCCCTGCTTGCGGCCAAGGAGCAAGTGCGC
AGCCTTGCACTGACAGCAGG

Product: SMC domain-containing protein

Products: NA

Alternate protein names: RecF/RecN/SMC N Domain Protein; SMC Domain Protein; Plasmid-Related Protein; SMC Domain-Containing Protein; Nucleoside Triphosphate Hydrolase Domain-Containing Protein; Smc Domain Protein; DNA Helicase Associated Protein; ATP-Dependent ExoDNAse Beta Subunit; ATP-Dependent OLD Family Endonuclease; ATPase; ATP-Dependent Endonuclease Of OLD Family; Ypothetical Protein YbjD.; Fis Family Transcriptional Regulator; Endonuclease

Number of amino acids: Translated: 634; Mature: 634

Protein sequence:

>634_residues
MKLQTIRLSNFQSFGEAPTEVVLEDITYLIGPNGSGKTAALQALCRLFAFDPSLRRILRSDFYVPFNEEAPPAERQLWVE
ADFLFPELGEDEDNSTVAPHFGHMRLDEVDGTPRVRFRLTATMGLDGDIEESLVYVLDINPDGSPLTTAQVLRSERNHIH
VHYLPARRDPADHIAYGANALLGRMLRAVNWDAERSVIKGLTDQISDSLAANPSINAFSTSLKTAWGGLHKGSFFADPKL
TFVASEIEALLRHMSVSFTPGHDEQLVDFSRLSDGQKSMLYLSLVLSSQAIGRAVLAAEDKSFDADKLRPPVFTVVAVEE
PENSLSPHYLGRIVNALNGMTGNGDAQALIATHAPSMLRRVDPERIRYLRLTQERTSRVTHIQLPDTTDEAHKFVREAVQ
AFPEVYFSRLVVLGEGDSEEIVLPRLLQAKGAPVDESAVSIAPLGGRHVNHFWRLLSALQIPYLTLLDLDVARYQAGWGR
IKYANNQLAAYEPSKVLPADHGIPSWNDATHKVRAYGHYNTLLEERGVYFSFPMDLDFSMLLAYPDAYGVEKEKPDESTI
KAVLGKSHYDASQYNEDEQKLFGTYHRSFKLGSKPAAHIDALAKLSDADLLANMPESLGRLADAVIAKLAELPE

Sequences:

>Translated_634_residues
MKLQTIRLSNFQSFGEAPTEVVLEDITYLIGPNGSGKTAALQALCRLFAFDPSLRRILRSDFYVPFNEEAPPAERQLWVE
ADFLFPELGEDEDNSTVAPHFGHMRLDEVDGTPRVRFRLTATMGLDGDIEESLVYVLDINPDGSPLTTAQVLRSERNHIH
VHYLPARRDPADHIAYGANALLGRMLRAVNWDAERSVIKGLTDQISDSLAANPSINAFSTSLKTAWGGLHKGSFFADPKL
TFVASEIEALLRHMSVSFTPGHDEQLVDFSRLSDGQKSMLYLSLVLSSQAIGRAVLAAEDKSFDADKLRPPVFTVVAVEE
PENSLSPHYLGRIVNALNGMTGNGDAQALIATHAPSMLRRVDPERIRYLRLTQERTSRVTHIQLPDTTDEAHKFVREAVQ
AFPEVYFSRLVVLGEGDSEEIVLPRLLQAKGAPVDESAVSIAPLGGRHVNHFWRLLSALQIPYLTLLDLDVARYQAGWGR
IKYANNQLAAYEPSKVLPADHGIPSWNDATHKVRAYGHYNTLLEERGVYFSFPMDLDFSMLLAYPDAYGVEKEKPDESTI
KAVLGKSHYDASQYNEDEQKLFGTYHRSFKLGSKPAAHIDALAKLSDADLLANMPESLGRLADAVIAKLAELPE
>Mature_634_residues
MKLQTIRLSNFQSFGEAPTEVVLEDITYLIGPNGSGKTAALQALCRLFAFDPSLRRILRSDFYVPFNEEAPPAERQLWVE
ADFLFPELGEDEDNSTVAPHFGHMRLDEVDGTPRVRFRLTATMGLDGDIEESLVYVLDINPDGSPLTTAQVLRSERNHIH
VHYLPARRDPADHIAYGANALLGRMLRAVNWDAERSVIKGLTDQISDSLAANPSINAFSTSLKTAWGGLHKGSFFADPKL
TFVASEIEALLRHMSVSFTPGHDEQLVDFSRLSDGQKSMLYLSLVLSSQAIGRAVLAAEDKSFDADKLRPPVFTVVAVEE
PENSLSPHYLGRIVNALNGMTGNGDAQALIATHAPSMLRRVDPERIRYLRLTQERTSRVTHIQLPDTTDEAHKFVREAVQ
AFPEVYFSRLVVLGEGDSEEIVLPRLLQAKGAPVDESAVSIAPLGGRHVNHFWRLLSALQIPYLTLLDLDVARYQAGWGR
IKYANNQLAAYEPSKVLPADHGIPSWNDATHKVRAYGHYNTLLEERGVYFSFPMDLDFSMLLAYPDAYGVEKEKPDESTI
KAVLGKSHYDASQYNEDEQKLFGTYHRSFKLGSKPAAHIDALAKLSDADLLANMPESLGRLADAVIAKLAELPE

Specific function: Unknown

COG id: COG3593

COG function: function code L; Predicted ATP-dependent endonuclease of the OLD family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70371; Mature: 70371

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLQTIRLSNFQSFGEAPTEVVLEDITYLIGPNGSGKTAALQALCRLFAFDPSLRRILRS
CCEEEEEECCCHHHCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHH
DFYVPFNEEAPPAERQLWVEADFLFPELGEDEDNSTVAPHFGHMRLDEVDGTPRVRFRLT
CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEECCCCCCEEEECCCCCCCEEEEEE
ATMGLDGDIEESLVYVLDINPDGSPLTTAQVLRSERNHIHVHYLPARRDPADHIAYGANA
EEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHH
LLGRMLRAVNWDAERSVIKGLTDQISDSLAANPSINAFSTSLKTAWGGLHKGSFFADPKL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEECCCCH
TFVASEIEALLRHMSVSFTPGHDEQLVDFSRLSDGQKSMLYLSLVLSSQAIGRAVLAAED
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECC
KSFDADKLRPPVFTVVAVEEPENSLSPHYLGRIVNALNGMTGNGDAQALIATHAPSMLRR
CCCCHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHH
VDPERIRYLRLTQERTSRVTHIQLPDTTDEAHKFVREAVQAFPEVYFSRLVVLGEGDSEE
CCHHHHHHHHCCHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC
IVLPRLLQAKGAPVDESAVSIAPLGGRHVNHFWRLLSALQIPYLTLLDLDVARYQAGWGR
CHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCE
IKYANNQLAAYEPSKVLPADHGIPSWNDATHKVRAYGHYNTLLEERGVYFSFPMDLDFSM
EEEECCEEEEECCCCCCCCCCCCCCCCCCCHHEEEHHHHHHHHHHCCCEEEECCCCCCEE
LLAYPDAYGVEKEKPDESTIKAVLGKSHYDASQYNEDEQKLFGTYHRSFKLGSKPAAHID
EEECCCCCCCCCCCCCHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCHHHHH
ALAKLSDADLLANMPESLGRLADAVIAKLAELPE
HHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLQTIRLSNFQSFGEAPTEVVLEDITYLIGPNGSGKTAALQALCRLFAFDPSLRRILRS
CCEEEEEECCCHHHCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHH
DFYVPFNEEAPPAERQLWVEADFLFPELGEDEDNSTVAPHFGHMRLDEVDGTPRVRFRLT
CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEECCCCCCEEEECCCCCCCEEEEEE
ATMGLDGDIEESLVYVLDINPDGSPLTTAQVLRSERNHIHVHYLPARRDPADHIAYGANA
EEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHH
LLGRMLRAVNWDAERSVIKGLTDQISDSLAANPSINAFSTSLKTAWGGLHKGSFFADPKL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEECCCCH
TFVASEIEALLRHMSVSFTPGHDEQLVDFSRLSDGQKSMLYLSLVLSSQAIGRAVLAAED
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECC
KSFDADKLRPPVFTVVAVEEPENSLSPHYLGRIVNALNGMTGNGDAQALIATHAPSMLRR
CCCCHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHH
VDPERIRYLRLTQERTSRVTHIQLPDTTDEAHKFVREAVQAFPEVYFSRLVVLGEGDSEE
CCHHHHHHHHCCHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC
IVLPRLLQAKGAPVDESAVSIAPLGGRHVNHFWRLLSALQIPYLTLLDLDVARYQAGWGR
CHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCE
IKYANNQLAAYEPSKVLPADHGIPSWNDATHKVRAYGHYNTLLEERGVYFSFPMDLDFSM
EEEECCEEEEECCCCCCCCCCCCCCCCCCCHHEEEHHHHHHHHHHCCCEEEECCCCCCEE
LLAYPDAYGVEKEKPDESTIKAVLGKSHYDASQYNEDEQKLFGTYHRSFKLGSKPAAHID
EEECCCCCCCCCCCCCHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCHHHHH
ALAKLSDADLLANMPESLGRLADAVIAKLAELPE
HHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA