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The map label for this gene is cyoA [H]

Identifier: 187930230

GI number: 187930230

Start: 3313944

End: 3314906

Strand: Reverse

Name: cyoA [H]

Synonym: Rpic_3163

Alternate gene names: 187930230

Gene position: 3314906-3313944 (Counterclockwise)

Preceding gene: 187930231

Following gene: 187930229

Centisome position: 84.08

GC content: 61.89

Gene sequence:

>963_bases
ATGAAGCGGCTCTTCGCCGCAAGCCTCCCGCTCCTGCTTGCGGGCTGCAACCTGACGGTCCTGGACCCGAAGGGGATGAT
TGCGGCTGAAGAAAAGACGCTGATCCTGGTGGCGACCGGCCTGATGCTGCTGGTCGTCATTCCCGTGATCGTGCTGACGC
TGGTGTTTGCGTGGAAGTACCGCGCGTCCAACACCAAGGCTCGCTACGAGCCCGACTGGTCGCACTCCAACGCCATCGAG
GCCGTGGTGTGGCTGATCCCGTGCCTGATCATCATCGTGTTGGGCGTGATCACCTATAAGTCCACGCACGCGCTCGATCC
GTACAAGCCGATCGAATCGGATGTGAAGCCCATCACGGTCGAGGCTGTCTCGCTCGACTGGAAGTGGCTGTTCATCTATC
CGGAACTGAAGATCGCGACGGTCAACCAGCTCGCATTCCCGGCCAACACCCCGATCAACTTCAAGATCACGTCCGACACG
GTGATGAACGCGTTCTTCATCCCGCAACTGGGCAGCCAGGTGTACGCCATGGCGGGCATGCAGACCAAGCTGCACCTGAT
CGCCAACGAGACCGGCGTGTTTGACGGCATGTCGTCGAACTACAGCGGCTCGGGCTTCACAGGCATGAAGTTCAAGGCCA
CGGCCATGACGAACGAAGAGTTCGACGCCTGGGTCAAGCAGGTTCGCGCCTCGTCGCAGAACCTGACCAAGGAAGGCTAC
GCCGAGCTGTCCAAGCCGAGCGAGAAGGTGCCGCCGGCGGCGTATGCATCGGTCGACCCGTCGCTGTATCACAGCATCCT
GCACAAATACATGGACAAGATGGGCGAAGGGGAGAAGGTCCTGACGCTCGACGAGGCGCTCGAAGGCGCCAACTGCACGA
CGGCCACGGCTGAGGCGGCAACGCGTCCGCTGCCGGTGCAGTCCGCCCTGCCTGCGCCCAAGAGCGCGGCCAAGAATTCC
TAG

Upstream 100 bases:

>100_bases
TTCCCCTTGTGGCCGCTGTCTGGGCTGCTGGGCTCCCGTGATGTTGGTGCGCATCGCCGGCGCAATTGTGTAAGACATGA
AGAACACACTCGTTCCACAT

Downstream 100 bases:

>100_bases
GAGTTGACGATGTTTGGCAAGTTGAGTCTGGAGGCCATTCCGCTGCACGAGCCCATCGTGGTCGTGACGGTGTCGGCCAT
TCTGCTGGGTGGCGCGGGCC

Product: ubiquinol oxidase subunit II

Products: NA

Alternate protein names: Cytochrome o subunit 2; Cytochrome o ubiquinol oxidase subunit 2; Oxidase BO(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MKRLFAASLPLLLAGCNLTVLDPKGMIAAEEKTLILVATGLMLLVVIPVIVLTLVFAWKYRASNTKARYEPDWSHSNAIE
AVVWLIPCLIIIVLGVITYKSTHALDPYKPIESDVKPITVEAVSLDWKWLFIYPELKIATVNQLAFPANTPINFKITSDT
VMNAFFIPQLGSQVYAMAGMQTKLHLIANETGVFDGMSSNYSGSGFTGMKFKATAMTNEEFDAWVKQVRASSQNLTKEGY
AELSKPSEKVPPAAYASVDPSLYHSILHKYMDKMGEGEKVLTLDEALEGANCTTATAEAATRPLPVQSALPAPKSAAKNS

Sequences:

>Translated_320_residues
MKRLFAASLPLLLAGCNLTVLDPKGMIAAEEKTLILVATGLMLLVVIPVIVLTLVFAWKYRASNTKARYEPDWSHSNAIE
AVVWLIPCLIIIVLGVITYKSTHALDPYKPIESDVKPITVEAVSLDWKWLFIYPELKIATVNQLAFPANTPINFKITSDT
VMNAFFIPQLGSQVYAMAGMQTKLHLIANETGVFDGMSSNYSGSGFTGMKFKATAMTNEEFDAWVKQVRASSQNLTKEGY
AELSKPSEKVPPAAYASVDPSLYHSILHKYMDKMGEGEKVLTLDEALEGANCTTATAEAATRPLPVQSALPAPKSAAKNS
>Mature_320_residues
MKRLFAASLPLLLAGCNLTVLDPKGMIAAEEKTLILVATGLMLLVVIPVIVLTLVFAWKYRASNTKARYEPDWSHSNAIE
AVVWLIPCLIIIVLGVITYKSTHALDPYKPIESDVKPITVEAVSLDWKWLFIYPELKIATVNQLAFPANTPINFKITSDT
VMNAFFIPQLGSQVYAMAGMQTKLHLIANETGVFDGMSSNYSGSGFTGMKFKATAMTNEEFDAWVKQVRASSQNLTKEGY
AELSKPSEKVPPAAYASVDPSLYHSILHKYMDKMGEGEKVLTLDEALEGANCTTATAEAATRPLPVQSALPAPKSAAKNS

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=299, Percent_Identity=53.8461538461538, Blast_Score=337, Evalue=7e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 34891; Mature: 34891

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLFAASLPLLLAGCNLTVLDPKGMIAAEEKTLILVATGLMLLVVIPVIVLTLVFAWKY
CCCHHHHCCHHHHCCCCEEEECCCCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH
RASNTKARYEPDWSHSNAIEAVVWLIPCLIIIVLGVITYKSTHALDPYKPIESDVKPITV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEE
EAVSLDWKWLFIYPELKIATVNQLAFPANTPINFKITSDTVMNAFFIPQLGSQVYAMAGM
EEEEECEEEEEEECCEEEEEEHHEECCCCCCEEEEECCHHHHHHHHHHHHCCHHHHHHCC
QTKLHLIANETGVFDGMSSNYSGSGFTGMKFKATAMTNEEFDAWVKQVRASSQNLTKEGY
CEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHH
AELSKPSEKVPPAAYASVDPSLYHSILHKYMDKMGEGEKVLTLDEALEGANCTTATAEAA
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCCCCCCCCHHHH
TRPLPVQSALPAPKSAAKNS
CCCCCCHHCCCCCCCCCCCC
>Mature Secondary Structure
MKRLFAASLPLLLAGCNLTVLDPKGMIAAEEKTLILVATGLMLLVVIPVIVLTLVFAWKY
CCCHHHHCCHHHHCCCCEEEECCCCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH
RASNTKARYEPDWSHSNAIEAVVWLIPCLIIIVLGVITYKSTHALDPYKPIESDVKPITV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEE
EAVSLDWKWLFIYPELKIATVNQLAFPANTPINFKITSDTVMNAFFIPQLGSQVYAMAGM
EEEEECEEEEEEECCEEEEEEHHEECCCCCCEEEEECCHHHHHHHHHHHHCCHHHHHHCC
QTKLHLIANETGVFDGMSSNYSGSGFTGMKFKATAMTNEEFDAWVKQVRASSQNLTKEGY
CEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHH
AELSKPSEKVPPAAYASVDPSLYHSILHKYMDKMGEGEKVLTLDEALEGANCTTATAEAA
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCCCCCCCCHHHH
TRPLPVQSALPAPKSAAKNS
CCCCCCHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]