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The map label for this gene is 187930128

Identifier: 187930128

GI number: 187930128

Start: 3194286

End: 3195047

Strand: Reverse

Name: 187930128

Synonym: Rpic_3060

Alternate gene names: NA

Gene position: 3195047-3194286 (Counterclockwise)

Preceding gene: 187930129

Following gene: 187930127

Centisome position: 81.04

GC content: 67.59

Gene sequence:

>762_bases
ATGCGCCGCTTGTCTTCCGCCCGCCTGATCGTCACTGCGCTGTGCGCGGGGACGTTGCTCGCGGGCACGCAGCTGGCGTG
GGCGGGCGCCCAGAAAGAGGAATACCTGGCGGACTCCGTGCGCAGCGCGCTGTCTGCCGCGGTGGCCGACAGCCGTCCGC
TGCGCCCGGTCTTTGCCAGCAACGACGAGCAACTCGGCTACCTGCGCTGGCTGGCGGAGATGTCGGTGCGCATGTCGGGC
AAGATCCCGCAGGCGTCGGTACGCGTCGAACTGATCGAGACGGCGTATTACGAGGCCAAGCGTGCTGGCCTGGACCCGGC
GCTGGTGCTCGGGCTCATCCAGGTGGAAAGCGGCTTTCGCAAGTACGCCATCAGCAGTGCCGGGGCGATGGGCCTGATGC
AGGTGATGCCGTTCTGGACCCGCAGCATCGGCGACAACGACTCGCGCAAGCTCTTCCACCTGCAGAGCAACCTGCGCTAC
GGCTGCACGATCCTGCGTCATTACCTCGACATGGAAGGCGGCAATCTGTACCTGGCGCTTGGCCGCTACAACGGCAGCCG
CGGTCAGCCGCAGTATCCGAATGCCGTGCTGGCGGCCTGGAAGCGTTGGCAATATCAGGAGTCGAGCGCGATGACGGTGT
CGGCGCCGGTGCCTGCCGAGCCCGCTGTGCCCACGCCGCGTGCCAAGGCGCTGCCGGAAGTGCCGGCGCGCAATCCGTTC
TCGCCGCTGCGTATTGCTGGCGGTCCGGCTGGCGGTTCGTGA

Upstream 100 bases:

>100_bases
GGCCGCCGAGACGAAGCCGCCACCGCCGTGGCGCCCGCCGACGTGCTGGCTACGCTGAAGGCGCGTCTCGCACAATAACG
CAACAACCGGACCGACCCGC

Downstream 100 bases:

>100_bases
TCTTCCGCCGGCGAACGGTCGGCCTACAATAGGGCCATTTCTCGCTCGCCCGCATCTCCATCCCGCATGTCCACCACCCA
ACCGTACGCGACGATGTCTG

Product: lytic transglycosylase catalytic subunit

Products: NA

Alternate protein names: Transglycosylase; Transglycosylase SLT Domain Protein; Lytic Murein Transglycosylase; Twin-Arginine Translocation Pathway Signal; Soluble Lytic Murein Transglycosylase-Like; Soluble Lytic Murein Transglycosylase- Related Protein; Lytic Transglycosylase; SLT Domain-Containing Protein; Signal Peptide Protein; Soluble Lytic Murein Transglycosylase

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MRRLSSARLIVTALCAGTLLAGTQLAWAGAQKEEYLADSVRSALSAAVADSRPLRPVFASNDEQLGYLRWLAEMSVRMSG
KIPQASVRVELIETAYYEAKRAGLDPALVLGLIQVESGFRKYAISSAGAMGLMQVMPFWTRSIGDNDSRKLFHLQSNLRY
GCTILRHYLDMEGGNLYLALGRYNGSRGQPQYPNAVLAAWKRWQYQESSAMTVSAPVPAEPAVPTPRAKALPEVPARNPF
SPLRIAGGPAGGS

Sequences:

>Translated_253_residues
MRRLSSARLIVTALCAGTLLAGTQLAWAGAQKEEYLADSVRSALSAAVADSRPLRPVFASNDEQLGYLRWLAEMSVRMSG
KIPQASVRVELIETAYYEAKRAGLDPALVLGLIQVESGFRKYAISSAGAMGLMQVMPFWTRSIGDNDSRKLFHLQSNLRY
GCTILRHYLDMEGGNLYLALGRYNGSRGQPQYPNAVLAAWKRWQYQESSAMTVSAPVPAEPAVPTPRAKALPEVPARNPF
SPLRIAGGPAGGS
>Mature_253_residues
MRRLSSARLIVTALCAGTLLAGTQLAWAGAQKEEYLADSVRSALSAAVADSRPLRPVFASNDEQLGYLRWLAEMSVRMSG
KIPQASVRVELIETAYYEAKRAGLDPALVLGLIQVESGFRKYAISSAGAMGLMQVMPFWTRSIGDNDSRKLFHLQSNLRY
GCTILRHYLDMEGGNLYLALGRYNGSRGQPQYPNAVLAAWKRWQYQESSAMTVSAPVPAEPAVPTPRAKALPEVPARNPF
SPLRIAGGPAGGS

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27486; Mature: 27486

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLSSARLIVTALCAGTLLAGTQLAWAGAQKEEYLADSVRSALSAAVADSRPLRPVFAS
CCCCHHHHHHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
NDEQLGYLRWLAEMSVRMSGKIPQASVRVELIETAYYEAKRAGLDPALVLGLIQVESGFR
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHH
KYAISSAGAMGLMQVMPFWTRSIGDNDSRKLFHLQSNLRYGCTILRHYLDMEGGNLYLAL
HHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEE
GRYNGSRGQPQYPNAVLAAWKRWQYQESSAMTVSAPVPAEPAVPTPRAKALPEVPARNPF
ECCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
SPLRIAGGPAGGS
CCEEEECCCCCCC
>Mature Secondary Structure
MRRLSSARLIVTALCAGTLLAGTQLAWAGAQKEEYLADSVRSALSAAVADSRPLRPVFAS
CCCCHHHHHHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
NDEQLGYLRWLAEMSVRMSGKIPQASVRVELIETAYYEAKRAGLDPALVLGLIQVESGFR
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHH
KYAISSAGAMGLMQVMPFWTRSIGDNDSRKLFHLQSNLRYGCTILRHYLDMEGGNLYLAL
HHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEE
GRYNGSRGQPQYPNAVLAAWKRWQYQESSAMTVSAPVPAEPAVPTPRAKALPEVPARNPF
ECCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
SPLRIAGGPAGGS
CCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA