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The map label for this gene is 187930127

Identifier: 187930127

GI number: 187930127

Start: 3193353

End: 3194219

Strand: Reverse

Name: 187930127

Synonym: Rpic_3059

Alternate gene names: NA

Gene position: 3194219-3193353 (Counterclockwise)

Preceding gene: 187930128

Following gene: 187930126

Centisome position: 81.02

GC content: 65.97

Gene sequence:

>867_bases
ATGTCCACCACCCAACCGTACGCGACGATGTCTGACGCGCTGCGCGACTGGCTGCAGCGTCACGTGACCGAAGGCTTTGA
GGCCGAATCCCTGGTGGCTTCGATGGTGCAATCCGGCTACGACCGTGCCTTCGCGCGCCGTGTCGTCGATGAGGCGCTGA
CTGCGCGCGCGCCCGCCCCGATTGTGGCGCCCGCTCCGACCTCCGCTGCCGACCAGGCGGTCGAAAACAGCAACGCTGTG
CATACCGCCGATGGCGACATCCCCATCCTGTTTGCGATCGAGACGCCGCGCATCGTGCTGTTCCAGCACTTTCTGTCGGA
CGCCGAGTGTGACGAGCTGATCGCGATCGGGCGCAATCGCCTGAAGCGTTCGCCCGTCGTGAACCCCGATACGGGCGAGG
AAAATTTGATCTCGGCCCGGACCAGCCAAGGCGGGATGTTCCAGGTCGGCGAGCATCCGCTGATCGCCAAGATCGAAGTG
CGTATCGCGCAGGCCGTGGGCGTGCCGGTCGAACACGGCGAGGGCTTCCAGGTGCTGAACTACCAGCCCGGCGGCGAATA
CCAGCCGCACTTCGATTTCTTCAACCCCGGGCGCAGCGGCGAGGCACGCCAGCTTGAAGTGGGCGGTCAGCGCGTGGCGA
CCATGGTCATCTACCTGAACAGCGTGCAGGCCGGCGGTGCCACGGGCTTTCCGAAGCTCGGGCTGGAGGTGGCGCCGGTC
AAGGGCAACGCCGTCTTCTTCGTCTACAAGCGGCCCGACGGCACGCTGGACGAGGACACGCTGCATGCCGGCCTGCCGGT
CGAGCGTGGTGAGAAGTGGATCGCCACCAAATGGCTGCGTGAACGTCCCTATCGTCGCGGCGCCTGA

Upstream 100 bases:

>100_bases
GCGTATTGCTGGCGGTCCGGCTGGCGGTTCGTGATCTTCCGCCGGCGAACGGTCGGCCTACAATAGGGCCATTTCTCGCT
CGCCCGCATCTCCATCCCGC

Downstream 100 bases:

>100_bases
GCGACGTCGGCGATGGAATACACGTTTCTCTCGGCGACCGTTCTGCTGGTGCTGATCACCGATCCGCTCGGCAACATTCC
GATCTTCATCTCGGCGCTGC

Product: Procollagen-proline dioxygenase

Products: NA

Alternate protein names: 2OG-Fe(II) Oxygenase; Prolyl 4-Hydroxylase Alpha Subunit; Oxidoreductase 2OG-Fe(II) Oxygenase Family; Oxygenase; Procollagen-Proline 2-Oxoglutarate-4-Dioxygenase; Response Regulator Receiver Domain-Containing Protein; 2OG-Fe(II) Oxygenase Family Oxidoreductase; Prolyl 4-Hydroxylase Subunit Alpha; 2OG-Fe(II) Oxygenase Superfamily Protein; 2OG-Fe(II) Oxygenase Family Protein; Procollagen-Proline 2-Oxoglutarate-4- Dioxygenase; Prolyl 4-Hydroxylase

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MSTTQPYATMSDALRDWLQRHVTEGFEAESLVASMVQSGYDRAFARRVVDEALTARAPAPIVAPAPTSAADQAVENSNAV
HTADGDIPILFAIETPRIVLFQHFLSDAECDELIAIGRNRLKRSPVVNPDTGEENLISARTSQGGMFQVGEHPLIAKIEV
RIAQAVGVPVEHGEGFQVLNYQPGGEYQPHFDFFNPGRSGEARQLEVGGQRVATMVIYLNSVQAGGATGFPKLGLEVAPV
KGNAVFFVYKRPDGTLDEDTLHAGLPVERGEKWIATKWLRERPYRRGA

Sequences:

>Translated_288_residues
MSTTQPYATMSDALRDWLQRHVTEGFEAESLVASMVQSGYDRAFARRVVDEALTARAPAPIVAPAPTSAADQAVENSNAV
HTADGDIPILFAIETPRIVLFQHFLSDAECDELIAIGRNRLKRSPVVNPDTGEENLISARTSQGGMFQVGEHPLIAKIEV
RIAQAVGVPVEHGEGFQVLNYQPGGEYQPHFDFFNPGRSGEARQLEVGGQRVATMVIYLNSVQAGGATGFPKLGLEVAPV
KGNAVFFVYKRPDGTLDEDTLHAGLPVERGEKWIATKWLRERPYRRGA
>Mature_287_residues
STTQPYATMSDALRDWLQRHVTEGFEAESLVASMVQSGYDRAFARRVVDEALTARAPAPIVAPAPTSAADQAVENSNAVH
TADGDIPILFAIETPRIVLFQHFLSDAECDELIAIGRNRLKRSPVVNPDTGEENLISARTSQGGMFQVGEHPLIAKIEVR
IAQAVGVPVEHGEGFQVLNYQPGGEYQPHFDFFNPGRSGEARQLEVGGQRVATMVIYLNSVQAGGATGFPKLGLEVAPVK
GNAVFFVYKRPDGTLDEDTLHAGLPVERGEKWIATKWLRERPYRRGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI217272849, Length=195, Percent_Identity=38.974358974359, Blast_Score=145, Evalue=4e-35,
Organism=Homo sapiens, GI63252888, Length=195, Percent_Identity=38.974358974359, Blast_Score=145, Evalue=4e-35,
Organism=Homo sapiens, GI63252886, Length=195, Percent_Identity=38.974358974359, Blast_Score=143, Evalue=2e-34,
Organism=Homo sapiens, GI63252893, Length=190, Percent_Identity=38.4210526315789, Blast_Score=135, Evalue=5e-32,
Organism=Homo sapiens, GI63252891, Length=190, Percent_Identity=38.4210526315789, Blast_Score=135, Evalue=5e-32,
Organism=Homo sapiens, GI217272861, Length=190, Percent_Identity=38.4210526315789, Blast_Score=135, Evalue=5e-32,
Organism=Homo sapiens, GI4758868, Length=189, Percent_Identity=37.5661375661376, Blast_Score=134, Evalue=8e-32,
Organism=Homo sapiens, GI217272863, Length=189, Percent_Identity=37.5661375661376, Blast_Score=134, Evalue=8e-32,
Organism=Homo sapiens, GI33589818, Length=196, Percent_Identity=38.7755102040816, Blast_Score=121, Evalue=7e-28,
Organism=Homo sapiens, GI217272851, Length=196, Percent_Identity=34.6938775510204, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17541712, Length=187, Percent_Identity=35.2941176470588, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17552840, Length=201, Percent_Identity=31.3432835820896, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI193209070, Length=112, Percent_Identity=33.9285714285714, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI193209068, Length=110, Percent_Identity=34.5454545454545, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17550388, Length=190, Percent_Identity=26.8421052631579, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI72000637, Length=190, Percent_Identity=23.6842105263158, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24651477, Length=187, Percent_Identity=36.8983957219251, Blast_Score=137, Evalue=9e-33,
Organism=Drosophila melanogaster, GI24651407, Length=195, Percent_Identity=36.4102564102564, Blast_Score=125, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24651418, Length=188, Percent_Identity=35.6382978723404, Blast_Score=114, Evalue=6e-26,
Organism=Drosophila melanogaster, GI281362877, Length=192, Percent_Identity=32.8125, Blast_Score=111, Evalue=6e-25,
Organism=Drosophila melanogaster, GI24651424, Length=197, Percent_Identity=35.0253807106599, Blast_Score=110, Evalue=9e-25,
Organism=Drosophila melanogaster, GI221460681, Length=191, Percent_Identity=34.0314136125654, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI116008432, Length=193, Percent_Identity=35.2331606217617, Blast_Score=108, Evalue=6e-24,
Organism=Drosophila melanogaster, GI24651420, Length=187, Percent_Identity=35.2941176470588, Blast_Score=107, Evalue=6e-24,
Organism=Drosophila melanogaster, GI116008128, Length=193, Percent_Identity=35.2331606217617, Blast_Score=107, Evalue=8e-24,
Organism=Drosophila melanogaster, GI116008130, Length=193, Percent_Identity=32.1243523316062, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI116008537, Length=193, Percent_Identity=32.1243523316062, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI116008434, Length=191, Percent_Identity=30.8900523560209, Blast_Score=101, Evalue=6e-22,
Organism=Drosophila melanogaster, GI281361323, Length=188, Percent_Identity=30.3191489361702, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24651430, Length=188, Percent_Identity=30.3191489361702, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI78706702, Length=189, Percent_Identity=32.2751322751323, Blast_Score=97, Evalue=8e-21,
Organism=Drosophila melanogaster, GI21358233, Length=187, Percent_Identity=31.0160427807487, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI45550650, Length=179, Percent_Identity=28.4916201117318, Blast_Score=85, Evalue=7e-17,
Organism=Drosophila melanogaster, GI221512818, Length=185, Percent_Identity=29.7297297297297, Blast_Score=85, Evalue=7e-17,
Organism=Drosophila melanogaster, GI221512810, Length=190, Percent_Identity=31.5789473684211, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24666354, Length=136, Percent_Identity=32.3529411764706, Blast_Score=78, Evalue=8e-15,
Organism=Drosophila melanogaster, GI21358309, Length=122, Percent_Identity=39.344262295082, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24651416, Length=122, Percent_Identity=39.344262295082, Blast_Score=72, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31436; Mature: 31305

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTQPYATMSDALRDWLQRHVTEGFEAESLVASMVQSGYDRAFARRVVDEALTARAPAP
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IVAPAPTSAADQAVENSNAVHTADGDIPILFAIETPRIVLFQHFLSDAECDELIAIGRNR
EECCCCCCHHHHHHHCCCCEEECCCCEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHH
LKRSPVVNPDTGEENLISARTSQGGMFQVGEHPLIAKIEVRIAQAVGVPVEHGEGFQVLN
HHCCCCCCCCCCCCHHEEEECCCCCEEEECCCCEEEEEEEEEHHHHCCCCCCCCCEEEEE
YQPGGEYQPHFDFFNPGRSGEARQLEVGGQRVATMVIYLNSVQAGGATGFPKLGLEVAPV
ECCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEE
KGNAVFFVYKRPDGTLDEDTLHAGLPVERGEKWIATKWLRERPYRRGA
CCCEEEEEEECCCCCCCCCHHHCCCCHHHCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
STTQPYATMSDALRDWLQRHVTEGFEAESLVASMVQSGYDRAFARRVVDEALTARAPAP
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IVAPAPTSAADQAVENSNAVHTADGDIPILFAIETPRIVLFQHFLSDAECDELIAIGRNR
EECCCCCCHHHHHHHCCCCEEECCCCEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHH
LKRSPVVNPDTGEENLISARTSQGGMFQVGEHPLIAKIEVRIAQAVGVPVEHGEGFQVLN
HHCCCCCCCCCCCCHHEEEECCCCCEEEECCCCEEEEEEEEEHHHHCCCCCCCCCEEEEE
YQPGGEYQPHFDFFNPGRSGEARQLEVGGQRVATMVIYLNSVQAGGATGFPKLGLEVAPV
ECCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEE
KGNAVFFVYKRPDGTLDEDTLHAGLPVERGEKWIATKWLRERPYRRGA
CCCEEEEEEECCCCCCCCCHHHCCCCHHHCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA