| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is proA
Identifier: 187930048
GI number: 187930048
Start: 3104941
End: 3106221
Strand: Reverse
Name: proA
Synonym: Rpic_2980
Alternate gene names: 187930048
Gene position: 3106221-3104941 (Counterclockwise)
Preceding gene: 187930049
Following gene: 187930047
Centisome position: 78.79
GC content: 64.72
Gene sequence:
>1281_bases ATGAAGCAGCTCGACGTCAACGAATACATGGCCCTGGTCGGCCGTCAGGCGCGCACTGCCTCGCGCGGCATGGCACGCGC CGGCACTGCGCAAAAGAACCGCGCGCTGTTGCATATTGCGGCCGCTGTCCGTCGCGATGCCGCCAAGCTCAAAGAGATCA ACGCCCGCGACGTCGAGCGTGCCCGCGCCAACGGCCAGGATGCTGCCTTTATCGACCGCCTCACGCTGACCGACCGCGCC ATCGATACCATGGCCGCGGGCCTGGAGCAGATCGCTGCGCTGCCCGACCCGATCGGCGAGATCAGCAATATGAAGTTCCG GCCCACCGGCATCCAGGTCGGCCAGATGCGCGTGCCGCTTGGCGTGATCGGCATCATCTATGAGTCGCGGCCGAACGTGA CGGTGGATGCCGCGGCGCTGTGCATCAAGTCGGGCAACGCGACCATTCTGCGAGGCGGTTCCGAAGCGATCGAATCGAAC GGCGCGCTGGCGGCGCTCATCGAGGAAGGCTTGGCAGACGCAGGCCTGCCGGCCAACGCCGTACAAGTGGTGGCTACGAC GGATCGCGCGGCCGTCGGCAAGCTGATCACCATGACGGAGTACGTCGATGTGATCGTGCCTCGCGGCGGCAAGAGCCTGA TCGCGCGACTGATCGAAGAAGCACGCGTGCCGATGATCAAGCATCTGGACGGCATCTGCCACGTCTACATCGACGCCGAC GCGGACATCGAGAAGGCCGTGCGCGTGTGCGACAACGCCAAGACGCAACGCTATGCGCCGTGCAACACGATGGAAACGCT GCTCGTGTCGCGCGATGTGGCCGCACGCGCGCTGCCGCCGCTGGCACGTATCTACCAGGACAAGGGCGTCGAACTGCGGG TGTGCCCGGGCACGCGCGCTACGCTCGAAGCTGCAGGCTTCGGCAATCTGAAAGATGCCGTCGAGGCCGACTGGCACACC GAATATCTTGCGCCGATCCTGTCGATCCGCACCGTTGACGGTCTGGACGCGGCCATCGAGCACATCAATACCTACGGTTC CGCGCACACCGATTCGATCATCACGGAGAACTATTCGACCGGCATGCGCTTCCTGCGCGAGGTCGATTCGGCCAGCGTGA TGATCAACGCGTCCACGCGCTTTGCCGATGGATTCGAGTACGGCCTGGGCGCCGAGATCGGCATCTCCAACGACAAGCTG CATGCGCGTGGGCCGGTCGGGCTGGAGGGACTGACCTCGCTGAAGTACGTCGTGTTCGGGCACGGCGAGATTCGCACCTG A
Upstream 100 bases:
>100_bases GCCGGGCAGCCTCCCGGTGCCGGCCTGATCCGCGCCATCGGCGCAAGCCTTCGAATTGTCCTCACACTGAATTGCCGGCA GCTTGCCGGTCGCGATCATC
Downstream 100 bases:
>100_bases TATCGCTTGCTGCACATTGAGCGCCGCCACGAGCGGCGCGCTGTTTTTACCGATCGCGCTTCACTCCATTCACGGGACGG TTCGCATGCTCTGGGTCAAA
Product: gamma-glutamyl phosphate reductase
Products: NA
Alternate protein names: GPR; Glutamate-5-semialdehyde dehydrogenase; Glutamyl-gamma-semialdehyde dehydrogenase; GSA dehydrogenase
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MKQLDVNEYMALVGRQARTASRGMARAGTAQKNRALLHIAAAVRRDAAKLKEINARDVERARANGQDAAFIDRLTLTDRA IDTMAAGLEQIAALPDPIGEISNMKFRPTGIQVGQMRVPLGVIGIIYESRPNVTVDAAALCIKSGNATILRGGSEAIESN GALAALIEEGLADAGLPANAVQVVATTDRAAVGKLITMTEYVDVIVPRGGKSLIARLIEEARVPMIKHLDGICHVYIDAD ADIEKAVRVCDNAKTQRYAPCNTMETLLVSRDVAARALPPLARIYQDKGVELRVCPGTRATLEAAGFGNLKDAVEADWHT EYLAPILSIRTVDGLDAAIEHINTYGSAHTDSIITENYSTGMRFLREVDSASVMINASTRFADGFEYGLGAEIGISNDKL HARGPVGLEGLTSLKYVVFGHGEIRT
Sequences:
>Translated_426_residues MKQLDVNEYMALVGRQARTASRGMARAGTAQKNRALLHIAAAVRRDAAKLKEINARDVERARANGQDAAFIDRLTLTDRA IDTMAAGLEQIAALPDPIGEISNMKFRPTGIQVGQMRVPLGVIGIIYESRPNVTVDAAALCIKSGNATILRGGSEAIESN GALAALIEEGLADAGLPANAVQVVATTDRAAVGKLITMTEYVDVIVPRGGKSLIARLIEEARVPMIKHLDGICHVYIDAD ADIEKAVRVCDNAKTQRYAPCNTMETLLVSRDVAARALPPLARIYQDKGVELRVCPGTRATLEAAGFGNLKDAVEADWHT EYLAPILSIRTVDGLDAAIEHINTYGSAHTDSIITENYSTGMRFLREVDSASVMINASTRFADGFEYGLGAEIGISNDKL HARGPVGLEGLTSLKYVVFGHGEIRT >Mature_426_residues MKQLDVNEYMALVGRQARTASRGMARAGTAQKNRALLHIAAAVRRDAAKLKEINARDVERARANGQDAAFIDRLTLTDRA IDTMAAGLEQIAALPDPIGEISNMKFRPTGIQVGQMRVPLGVIGIIYESRPNVTVDAAALCIKSGNATILRGGSEAIESN GALAALIEEGLADAGLPANAVQVVATTDRAAVGKLITMTEYVDVIVPRGGKSLIARLIEEARVPMIKHLDGICHVYIDAD ADIEKAVRVCDNAKTQRYAPCNTMETLLVSRDVAARALPPLARIYQDKGVELRVCPGTRATLEAAGFGNLKDAVEADWHT EYLAPILSIRTVDGLDAAIEHINTYGSAHTDSIITENYSTGMRFLREVDSASVMINASTRFADGFEYGLGAEIGISNDKL HARGPVGLEGLTSLKYVVFGHGEIRT
Specific function: Catalyzes the NADPH dependent reduction of L-gamma- glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate
COG id: COG0014
COG function: function code E; Gamma-glutamyl phosphate reductase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyl phosphate reductase family
Homologues:
Organism=Homo sapiens, GI62912457, Length=415, Percent_Identity=36.8674698795181, Blast_Score=256, Evalue=2e-68, Organism=Homo sapiens, GI21361368, Length=415, Percent_Identity=36.8674698795181, Blast_Score=256, Evalue=2e-68, Organism=Escherichia coli, GI1786438, Length=413, Percent_Identity=42.1307506053269, Blast_Score=337, Evalue=8e-94, Organism=Caenorhabditis elegans, GI17569969, Length=416, Percent_Identity=36.5384615384615, Blast_Score=265, Evalue=3e-71, Organism=Caenorhabditis elegans, GI17569967, Length=416, Percent_Identity=36.5384615384615, Blast_Score=265, Evalue=3e-71, Organism=Saccharomyces cerevisiae, GI6324899, Length=428, Percent_Identity=35.7476635514019, Blast_Score=282, Evalue=8e-77, Organism=Drosophila melanogaster, GI21357643, Length=413, Percent_Identity=38.7409200968523, Blast_Score=271, Evalue=7e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PROA_RALPJ (B2UC98)
Other databases:
- EMBL: CP001068 - RefSeq: YP_001900535.1 - ProteinModelPortal: B2UC98 - GeneID: 6289703 - GenomeReviews: CP001068_GR - KEGG: rpi:Rpic_2980 - HOGENOM: HBG318080 - OMA: GICGAME - ProtClustDB: PRK00197 - GO: GO:0005737 - HAMAP: MF_00412 - InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR000965 - InterPro: IPR020593 - InterPro: IPR012134 - Gene3D: G3DSA:3.40.309.10 - Gene3D: G3DSA:3.40.605.10 - PANTHER: PTHR11063:SF1 - PIRSF: PIRSF000151 - TIGRFAMs: TIGR00407
Pfam domain/function: PF00171 Aldedh; SSF53720 Aldehyde_DH/Histidinol_DH
EC number: =1.2.1.41
Molecular weight: Translated: 45658; Mature: 45658
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: PS01223 PROA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLDVNEYMALVGRQARTASRGMARAGTAQKNRALLHIAAAVRRDAAKLKEINARDVER CCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH ARANGQDAAFIDRLTLTDRAIDTMAAGLEQIAALPDPIGEISNMKFRPTGIQVGQMRVPL HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEECCCCEEECEEECCE GVIGIIYESRPNVTVDAAALCIKSGNATILRGGSEAIESNGALAALIEEGLADAGLPANA EEEEEEEECCCCEEEEEEEEEEECCCEEEEECCHHHHHCCCCCHHHHHHHHHCCCCCCCC VQVVATTDRAAVGKLITMTEYVDVIVPRGGKSLIARLIEEARVPMIKHLDGICHVYIDAD EEEEEECCHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCCHHHHCCCEEEEEECCC ADIEKAVRVCDNAKTQRYAPCNTMETLLVSRDVAARALPPLARIYQDKGVELRVCPGTRA CCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCCCC TLEAAGFGNLKDAVEADWHTEYLAPILSIRTVDGLDAAIEHINTYGSAHTDSIITENYST EEEECCCCCCHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHCCHHH GMRFLREVDSASVMINASTRFADGFEYGLGAEIGISNDKLHARGPVGLEGLTSLKYVVFG HHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEECCCCCCEECCCCCCCCHHHHEEEEEEE HGEIRT CCCCCC >Mature Secondary Structure MKQLDVNEYMALVGRQARTASRGMARAGTAQKNRALLHIAAAVRRDAAKLKEINARDVER CCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH ARANGQDAAFIDRLTLTDRAIDTMAAGLEQIAALPDPIGEISNMKFRPTGIQVGQMRVPL HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEECCCCEEECEEECCE GVIGIIYESRPNVTVDAAALCIKSGNATILRGGSEAIESNGALAALIEEGLADAGLPANA EEEEEEEECCCCEEEEEEEEEEECCCEEEEECCHHHHHCCCCCHHHHHHHHHCCCCCCCC VQVVATTDRAAVGKLITMTEYVDVIVPRGGKSLIARLIEEARVPMIKHLDGICHVYIDAD EEEEEECCHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCCHHHHCCCEEEEEECCC ADIEKAVRVCDNAKTQRYAPCNTMETLLVSRDVAARALPPLARIYQDKGVELRVCPGTRA CCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCCCC TLEAAGFGNLKDAVEADWHTEYLAPILSIRTVDGLDAAIEHINTYGSAHTDSIITENYST EEEECCCCCCHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHCCHHH GMRFLREVDSASVMINASTRFADGFEYGLGAEIGISNDKLHARGPVGLEGLTSLKYVVFG HHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEECCCCCCEECCCCCCCCHHHHEEEEEEE HGEIRT CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA