Click here to switch to the map view.

The map label for this gene is yceJ [H]

Identifier: 187930031

GI number: 187930031

Start: 3086035

End: 3086616

Strand: Reverse

Name: yceJ [H]

Synonym: Rpic_2963

Alternate gene names: 187930031

Gene position: 3086616-3086035 (Counterclockwise)

Preceding gene: 187930032

Following gene: 187930030

Centisome position: 78.29

GC content: 62.71

Gene sequence:

>582_bases
ATGTCACAAGCCGCCCACTCGAATCCCGCCATGCGCGGCGCCGCTGACCACGGCGCCTATACCAAGCCGGCGATTGCGAT
GCACTGGATCGTCGCGTTGCTGATCTTCGCGGCCTTCGGGCTCGGTCTGTACATGACCGATATCCCGGGCTTTACGCCTA
CCAAGCTGAAACTGTTCTCGTATCACAAATGGATCGGTATCACGGTGCTGATCTTTGCGGTGCTGCGCGTGCTGTGGCGC
TTGACGCATCCCGCGCCGGGCCCTGTGCCGGGCATGCCGAAGTGGCAACACGCCGCCGCGGAAGCCGCGCACGTCGGGTT
GTATCTTTTGATTCTTGCGGTGCCGCTGACCGGCTATCTGCTCAGCGTCGCGGCCGGCGTCAAGGTTGTCTATCTTGGCC
TGTGGGAACTGCCGATGCCGTTCGACAAGAGCGACGCGCTGAAAGACATCTTCAGCATGGCGCACGAATGGCTGAACTGG
ACCATGGCGGCCATCGTCGTGGTGCACATCCTGGCTGCGCTCAAGCACCACGTCGTCGAGCGTGACGGCACGCTGCGCCG
CATGGTGCCTTTCCTCCGCTGA

Upstream 100 bases:

>100_bases
ACTTGACCGGTCGGATTGCGCAAATAATGCACAACTGTTTGGCGCCGTGGCCCTATCCACAGGCGCCGCCACCGAGCGCT
CCAAAATACCGAGGGAACCG

Downstream 100 bases:

>100_bases
TTTCCAAACGTGCCGGTGCACGGTGTGTGCCGGTGCTTCTGCCTCGCCATCCTCACCAAGACTGCCGGCATGATCCGGCC
TGACCGAAGGAGTCTGATGA

Product: cytochrome B561

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MSQAAHSNPAMRGAADHGAYTKPAIAMHWIVALLIFAAFGLGLYMTDIPGFTPTKLKLFSYHKWIGITVLIFAVLRVLWR
LTHPAPGPVPGMPKWQHAAAEAAHVGLYLLILAVPLTGYLLSVAAGVKVVYLGLWELPMPFDKSDALKDIFSMAHEWLNW
TMAAIVVVHILAALKHHVVERDGTLRRMVPFLR

Sequences:

>Translated_193_residues
MSQAAHSNPAMRGAADHGAYTKPAIAMHWIVALLIFAAFGLGLYMTDIPGFTPTKLKLFSYHKWIGITVLIFAVLRVLWR
LTHPAPGPVPGMPKWQHAAAEAAHVGLYLLILAVPLTGYLLSVAAGVKVVYLGLWELPMPFDKSDALKDIFSMAHEWLNW
TMAAIVVVHILAALKHHVVERDGTLRRMVPFLR
>Mature_192_residues
SQAAHSNPAMRGAADHGAYTKPAIAMHWIVALLIFAAFGLGLYMTDIPGFTPTKLKLFSYHKWIGITVLIFAVLRVLWRL
THPAPGPVPGMPKWQHAAAEAAHVGLYLLILAVPLTGYLLSVAAGVKVVYLGLWELPMPFDKSDALKDIFSMAHEWLNWT
MAAIVVVHILAALKHHVVERDGTLRRMVPFLR

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b561 family [H]

Homologues:

Organism=Escherichia coli, GI1787296, Length=170, Percent_Identity=36.4705882352941, Blast_Score=120, Evalue=8e-29,
Organism=Escherichia coli, GI87082013, Length=173, Percent_Identity=29.4797687861272, Blast_Score=70, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 21334; Mature: 21203

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQAAHSNPAMRGAADHGAYTKPAIAMHWIVALLIFAAFGLGLYMTDIPGFTPTKLKLFS
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
YHKWIGITVLIFAVLRVLWRLTHPAPGPVPGMPKWQHAAAEAAHVGLYLLILAVPLTGYL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LSVAAGVKVVYLGLWELPMPFDKSDALKDIFSMAHEWLNWTMAAIVVVHILAALKHHVVE
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDGTLRRMVPFLR
CCCHHHHHHHHCC
>Mature Secondary Structure 
SQAAHSNPAMRGAADHGAYTKPAIAMHWIVALLIFAAFGLGLYMTDIPGFTPTKLKLFS
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
YHKWIGITVLIFAVLRVLWRLTHPAPGPVPGMPKWQHAAAEAAHVGLYLLILAVPLTGYL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LSVAAGVKVVYLGLWELPMPFDKSDALKDIFSMAHEWLNWTMAAIVVVHILAALKHHVVE
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDGTLRRMVPFLR
CCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]