| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is katG
Identifier: 187929990
GI number: 187929990
Start: 3035524
End: 3037689
Strand: Reverse
Name: katG
Synonym: Rpic_2922
Alternate gene names: 187929990
Gene position: 3037689-3035524 (Counterclockwise)
Preceding gene: 187929991
Following gene: 187929989
Centisome position: 77.05
GC content: 64.77
Gene sequence:
>2166_bases ATGACGACTGAAGCCAAATGCCCGTTTTCCGGCCATGCTCCCGCTGCTTCCCACGCCTTCGGTGGCGGTACGGCCAACAA GGACTGGTGGCCCAATCAGCTGCGCGTCGATCTGCTGAACCAGCATTCCGAGAAGTCTGATCCGCTCGGGTCGAACTTCA ACTACCGCAAGTCGTTCAATGCGATCGACTACGACGCGCTCAAGGCCGATCTGCGCCGCCTGATGACCGATTCGCAAGAC TGGTGGCCGGCAGACTTTGGCCACTATGGCCCGCAGTTCATCCGCATGGCCTGGCATGCCGCCGGCACGTACCGCACGGG CGATGGCCGTGGCGGCGCAGGGCGCGGCCAGCAACGTTTTGCACCCCTCAACTCCTGGCCCGACAACGTCAACATCGACA AGTCGCGCCGGCTGCTGTGGCCGATCAAGCAGAAGTACGGCCAGGCCATCTCGTGGGCCGACCTGCTGATCCTGACCGGC AACGTTGCGCTTGAAACCATGGGCTTCCGCACGTTCGGCTTTGCCGCCGGCCGTGAAGACACGTGGGAACCGGACAACGA TGTGTATTGGGGCAACGAGACCAAGTGGTTGGAAGCCACGCGCTATTCGGGCGAGCGCAACCTCGCGAACCCGCTCGCCG CCGTGCAGATGGGCTTGATCTACGTGAACCCGGAAGGCCCGGAGCACGCCCATGGTGATCCGCTCGCGGCCGCCAAGGAC ATCCGCGAGACCTTCGCCCGCATGGCGATGGACGACGAAGAAACCGTTGCGCTGATCGCCGGCGGTCACACCTTCGGCAA GACCCACGGCGCGGGGCCAGCAAGTCACGTTGGCGCCGATGTCGAGGCCGCGCCGCTGGAAGCCCAAGGCCTGGGCTGGG CCAGCACCTTTGGCACCGGCAAGGGCGCGGATGCGATCACCAGCGGGCTCGAAGTCACCTGGACGCAAACGCCCGCGCAA TGGAGCAACTTCTTCTTCGAGAACCTGTTCAAGTACGAATGGGTGCAGGAAAAGAGCCCCGCCGGCGCACTGCAATGGGT GGCCAAAGACGCCGAGGCGATCATTCCGGGCCCGACGCCCGATTCGCCCAAGCGCCGCCCGACGATGCTGACGACCGACT TGTCGCTGCGTTTTGATCCGGCATACGAAAAGATCTCGCGCCGCTTCCTGGACAACCCGCAGGCGTTTGCTGAAGCCTTT GCCCGCGCTTGGTTCAAGCTCACGCACCGTGACCTCGGCCCGAAGTCGCGTTACCTCGGCCCCGAAGTGCCGCGTGAAGA CCTGATCTGGCAAGACCCGCTGCCGACGGCGACGCACAAGCCGACCGAGGCCGATATCGCCGATCTCAAAGCAAAGATTG CCGCTTCTGGCCTGTCGGCATCCGAACTGGTTGCCGTGGCGTGGGCGTCTGCCTCGACCTTCCGCGGGTCGGACAAGCGT GGCGGCGCCAACGGCGCGCGCATTCGGCTGGCGCCGCAGAAAGATTGGGCGGTCAACCAGCCGGTGGCCGGCACGCTGGC TAGGCTGGAGGAAATTCAACGCGCCTCCGGCAAGGCTTCGCTGGCGGATGTGATCGTGCTGGCAGGCAGCGTTGGTATCG AGCTGGCCGCCAAGGCCGCCGGCACGACGATCACCGTGCCGTTCACGCCGGGCCGCGTCGATGCGACGGCCGAGCAGACC GATGCCACGTCCTTCTCGGTGCTCGAACCCGTGGCCGACGGTTTCCGCAATTACCAGAAGACGCAGTTTGCGGTGCCGGG CGAAGTGCTGCTGCTCGACAGGGCTCAACTCCTGACGCTGACGGCACCGGAGTTGACCGTGCTGATCGGTGGCCTGCGCG CCATCAACATCAACGCGGATGGCAGCCAGCATGGCGTCTTTACCAGCACGCCCGGCGCGCTGACGAACGACTTCTTCGTC AACCTGCTCGACATGAACACCGAATGGAAGCCTGCCGGCGACATCTACGAGGGCTATGACCGCAAGACGGGCGAGCGCAA GTGGACCGGCACGCGCGTCGATCTGGTGTTCGGTTCGAACTCGATCCTGCGTGCGCTGGCCGAGGTGTTCGGCAGCGCCG ACGGTAAGGAGCGGTTCATCAGCGAGTTCGTGGCCGCGTGGGTCAAGGTGATGAATCTCGACCGGTTCGATCTGGCCGCC GCCTAA
Upstream 100 bases:
>100_bases TGCGACAGGCGTTTCGGCAGCAGCGAATTGCGCCCCTCCCGCGAGCCCGTTGCGTTGCGGTTGGGGCGGCATCACCCCCC ATGACCTAACCGAGAGAATC
Downstream 100 bases:
>100_bases GCTGCTTTCGGCGGGACTAAAATGGCGCCTTGCCTCGTGCAGGCGCCATTTTTCTTTGGTGATTTCCATGCAATCGTCCG CTGCCCAACCCAGCCGCCTC
Product: catalase/peroxidase HPI
Products: NA
Alternate protein names: CP; Peroxidase/catalase
Number of amino acids: Translated: 721; Mature: 720
Protein sequence:
>721_residues MTTEAKCPFSGHAPAASHAFGGGTANKDWWPNQLRVDLLNQHSEKSDPLGSNFNYRKSFNAIDYDALKADLRRLMTDSQD WWPADFGHYGPQFIRMAWHAAGTYRTGDGRGGAGRGQQRFAPLNSWPDNVNIDKSRRLLWPIKQKYGQAISWADLLILTG NVALETMGFRTFGFAAGREDTWEPDNDVYWGNETKWLEATRYSGERNLANPLAAVQMGLIYVNPEGPEHAHGDPLAAAKD IRETFARMAMDDEETVALIAGGHTFGKTHGAGPASHVGADVEAAPLEAQGLGWASTFGTGKGADAITSGLEVTWTQTPAQ WSNFFFENLFKYEWVQEKSPAGALQWVAKDAEAIIPGPTPDSPKRRPTMLTTDLSLRFDPAYEKISRRFLDNPQAFAEAF ARAWFKLTHRDLGPKSRYLGPEVPREDLIWQDPLPTATHKPTEADIADLKAKIAASGLSASELVAVAWASASTFRGSDKR GGANGARIRLAPQKDWAVNQPVAGTLARLEEIQRASGKASLADVIVLAGSVGIELAAKAAGTTITVPFTPGRVDATAEQT DATSFSVLEPVADGFRNYQKTQFAVPGEVLLLDRAQLLTLTAPELTVLIGGLRAININADGSQHGVFTSTPGALTNDFFV NLLDMNTEWKPAGDIYEGYDRKTGERKWTGTRVDLVFGSNSILRALAEVFGSADGKERFISEFVAAWVKVMNLDRFDLAA A
Sequences:
>Translated_721_residues MTTEAKCPFSGHAPAASHAFGGGTANKDWWPNQLRVDLLNQHSEKSDPLGSNFNYRKSFNAIDYDALKADLRRLMTDSQD WWPADFGHYGPQFIRMAWHAAGTYRTGDGRGGAGRGQQRFAPLNSWPDNVNIDKSRRLLWPIKQKYGQAISWADLLILTG NVALETMGFRTFGFAAGREDTWEPDNDVYWGNETKWLEATRYSGERNLANPLAAVQMGLIYVNPEGPEHAHGDPLAAAKD IRETFARMAMDDEETVALIAGGHTFGKTHGAGPASHVGADVEAAPLEAQGLGWASTFGTGKGADAITSGLEVTWTQTPAQ WSNFFFENLFKYEWVQEKSPAGALQWVAKDAEAIIPGPTPDSPKRRPTMLTTDLSLRFDPAYEKISRRFLDNPQAFAEAF ARAWFKLTHRDLGPKSRYLGPEVPREDLIWQDPLPTATHKPTEADIADLKAKIAASGLSASELVAVAWASASTFRGSDKR GGANGARIRLAPQKDWAVNQPVAGTLARLEEIQRASGKASLADVIVLAGSVGIELAAKAAGTTITVPFTPGRVDATAEQT DATSFSVLEPVADGFRNYQKTQFAVPGEVLLLDRAQLLTLTAPELTVLIGGLRAININADGSQHGVFTSTPGALTNDFFV NLLDMNTEWKPAGDIYEGYDRKTGERKWTGTRVDLVFGSNSILRALAEVFGSADGKERFISEFVAAWVKVMNLDRFDLAA A >Mature_720_residues TTEAKCPFSGHAPAASHAFGGGTANKDWWPNQLRVDLLNQHSEKSDPLGSNFNYRKSFNAIDYDALKADLRRLMTDSQDW WPADFGHYGPQFIRMAWHAAGTYRTGDGRGGAGRGQQRFAPLNSWPDNVNIDKSRRLLWPIKQKYGQAISWADLLILTGN VALETMGFRTFGFAAGREDTWEPDNDVYWGNETKWLEATRYSGERNLANPLAAVQMGLIYVNPEGPEHAHGDPLAAAKDI RETFARMAMDDEETVALIAGGHTFGKTHGAGPASHVGADVEAAPLEAQGLGWASTFGTGKGADAITSGLEVTWTQTPAQW SNFFFENLFKYEWVQEKSPAGALQWVAKDAEAIIPGPTPDSPKRRPTMLTTDLSLRFDPAYEKISRRFLDNPQAFAEAFA RAWFKLTHRDLGPKSRYLGPEVPREDLIWQDPLPTATHKPTEADIADLKAKIAASGLSASELVAVAWASASTFRGSDKRG GANGARIRLAPQKDWAVNQPVAGTLARLEEIQRASGKASLADVIVLAGSVGIELAAKAAGTTITVPFTPGRVDATAEQTD ATSFSVLEPVADGFRNYQKTQFAVPGEVLLLDRAQLLTLTAPELTVLIGGLRAININADGSQHGVFTSTPGALTNDFFVN LLDMNTEWKPAGDIYEGYDRKTGERKWTGTRVDLVFGSNSILRALAEVFGSADGKERFISEFVAAWVKVMNLDRFDLAAA
Specific function: Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
COG id: COG0376
COG function: function code P; Catalase (peroxidase I)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peroxidase family. Peroxidase/catalase subfamily
Homologues:
Organism=Escherichia coli, GI1790378, Length=720, Percent_Identity=68.6111111111111, Blast_Score=981, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KATG_RALPJ (B2UBU5)
Other databases:
- EMBL: CP001068 - RefSeq: YP_001900477.1 - ProteinModelPortal: B2UBU5 - SMR: B2UBU5 - GeneID: 6288788 - GenomeReviews: CP001068_GR - KEGG: rpi:Rpic_2922 - HOGENOM: HBG285610 - OMA: FEWELTK - ProtClustDB: PRK15061 - HAMAP: MF_01961 - InterPro: IPR000763 - InterPro: IPR010255 - InterPro: IPR002016 - InterPro: IPR019794 - InterPro: IPR019793 - PRINTS: PR00460 - PRINTS: PR00458 - TIGRFAMs: TIGR00198
Pfam domain/function: PF00141 peroxidase; SSF48113 Peroxidase_super
EC number: =1.11.1.6; =1.11.1.7
Molecular weight: Translated: 78619; Mature: 78487
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS00435 PEROXIDASE_1; PS00436 PEROXIDASE_2; PS50873 PEROXIDASE_4
Important sites: ACT_SITE 99-99
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEAKCPFSGHAPAASHAFGGGTANKDWWPNQLRVDLLNQHSEKSDPLGSNFNYRKSFN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC AIDYDALKADLRRLMTDSQDWWPADFGHYGPQFIRMAWHAAGTYRTGDGRGGAGRGQQRF CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCCCC APLNSWPDNVNIDKSRRLLWPIKQKYGQAISWADLLILTGNVALETMGFRTFGFAAGRED CCCCCCCCCCCCCCCCCEECHHHHHHCCCCCCEEEEEEECCEEEEECCCEEEECCCCCCC TWEPDNDVYWGNETKWLEATRYSGERNLANPLAAVQMGLIYVNPEGPEHAHGDPLAAAKD CCCCCCCEEECCCCCEEEHHHCCCCCCHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHH IRETFARMAMDDEETVALIAGGHTFGKTHGAGPASHVGADVEAAPLEAQGLGWASTFGTG HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHCCCCC KGADAITSGLEVTWTQTPAQWSNFFFENLFKYEWVQEKSPAGALQWVAKDAEAIIPGPTP CCHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEECCCCC DSPKRRPTMLTTDLSLRFDPAYEKISRRFLDNPQAFAEAFARAWFKLTHRDLGPKSRYLG CCCCCCCEEEEEEEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC PEVPREDLIWQDPLPTATHKPTEADIADLKAKIAASGLSASELVAVAWASASTFRGSDKR CCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHEEEEEECCCHHCCCCCCC GGANGARIRLAPQKDWAVNQPVAGTLARLEEIQRASGKASLADVIVLAGSVGIELAAKAA CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCCC GTTITVPFTPGRVDATAEQTDATSFSVLEPVADGFRNYQKTQFAVPGEVLLLDRAQLLTL CCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCEEEECCCEEEEE TAPELTVLIGGLRAININADGSQHGVFTSTPGALTNDFFVNLLDMNTEWKPAGDIYEGYD CCCHHEEEECCEEEEEECCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCHHHCCC RKTGERKWTGTRVDLVFGSNSILRALAEVFGSADGKERFISEFVAAWVKVMNLDRFDLAA CCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHCC A C >Mature Secondary Structure TTEAKCPFSGHAPAASHAFGGGTANKDWWPNQLRVDLLNQHSEKSDPLGSNFNYRKSFN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC AIDYDALKADLRRLMTDSQDWWPADFGHYGPQFIRMAWHAAGTYRTGDGRGGAGRGQQRF CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCCCC APLNSWPDNVNIDKSRRLLWPIKQKYGQAISWADLLILTGNVALETMGFRTFGFAAGRED CCCCCCCCCCCCCCCCCEECHHHHHHCCCCCCEEEEEEECCEEEEECCCEEEECCCCCCC TWEPDNDVYWGNETKWLEATRYSGERNLANPLAAVQMGLIYVNPEGPEHAHGDPLAAAKD CCCCCCCEEECCCCCEEEHHHCCCCCCHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHH IRETFARMAMDDEETVALIAGGHTFGKTHGAGPASHVGADVEAAPLEAQGLGWASTFGTG HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHCCCCC KGADAITSGLEVTWTQTPAQWSNFFFENLFKYEWVQEKSPAGALQWVAKDAEAIIPGPTP CCHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEECCCCC DSPKRRPTMLTTDLSLRFDPAYEKISRRFLDNPQAFAEAFARAWFKLTHRDLGPKSRYLG CCCCCCCEEEEEEEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC PEVPREDLIWQDPLPTATHKPTEADIADLKAKIAASGLSASELVAVAWASASTFRGSDKR CCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHEEEEEECCCHHCCCCCCC GGANGARIRLAPQKDWAVNQPVAGTLARLEEIQRASGKASLADVIVLAGSVGIELAAKAA CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCCC GTTITVPFTPGRVDATAEQTDATSFSVLEPVADGFRNYQKTQFAVPGEVLLLDRAQLLTL CCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCEEEECCCEEEEE TAPELTVLIGGLRAININADGSQHGVFTSTPGALTNDFFVNLLDMNTEWKPAGDIYEGYD CCCHHEEEECCEEEEEECCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCHHHCCC RKTGERKWTGTRVDLVFGSNSILRALAEVFGSADGKERFISEFVAAWVKVMNLDRFDLAA CCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA