Click here to switch to the map view.

The map label for this gene is 187929984

Identifier: 187929984

GI number: 187929984

Start: 3029936

End: 3030373

Strand: Reverse

Name: 187929984

Synonym: Rpic_2916

Alternate gene names: NA

Gene position: 3030373-3029936 (Counterclockwise)

Preceding gene: 187929985

Following gene: 187929983

Centisome position: 76.86

GC content: 64.16

Gene sequence:

>438_bases
GTGGCAAGCAAGCCGAGGTGTCAGCGCGCGCGGGCGGCGCGGGGCTTTACGCTGATTGAGCTCATGATCACAGTGGCCAT
TGTCGGCATCCTGGCGATCATTGCGTATCCCAGCTACGTCCAGTACATCGTCCGCTCCAATCGGGCAGCGGCGGAATCCT
TCATGCAGGAAGTGGCGGCCGCGCAGGAGCGCTTCCTGCTCGACAATCGCGCCTATGCGCCTGACCTGACAACGCTGCAA
TACGCCAGCAACGTCCCGGCGAACGTTTCACCCAACTACACCTTCACGCTGAGCGCCAGCAGCGTGCCGCCGTCTTACCA
ACTGGCGGCGACTCCGCAGGGCTCGCAACAGGCGAACGACGCCGCCTGCGGCACACTCACGCTGACCAACACCGGTGCCA
AGGTGGCGTCCACAGGCGCCTCCAACTGCTGGAAGTGA

Upstream 100 bases:

>100_bases
TGCTGAGAATTGCCGTATAAGCGGTGGGTGGGCTTGCCAGGTCATCGGCGGGCGCGCATCAAAACGATAAAAGCAACAGC
AAATCCGGGTGGGTGAAAAC

Downstream 100 bases:

>100_bases
GGCGAGCCATGACTACTCTGCGCAAGCCCACTCAAGGTTTCACGCTCACCGAGCTGATGGTCACGCTGGCTGTGCTCGCC
ATCCTCGTGACGATTGCGGT

Product: putative type 4 fimbrial biogenesis transmembrane protein

Products: NA

Alternate protein names: Fimbrial Protein Pilin; Type IV Pilin; Methylation Site Containing Protein; Type 4 Fimbrial Biogenesis Protein PilE; General Secretion Pathway Protein H; Type 4 Fimbrial Biogenesis Transmembrane Protein; PilE Protein; Tfp Pilus Assembly Protein PilE; Type IV Pilin PilE; Pilus Assembly Protein; Prepilin Like Protein; Type IV Fimbrial Biogenesis Protein; Type IV Pilus Assembly Protein PilE; Type 4 Fimbrial Biogenesis Signal Peptide Protein; Methylation; Tfp Pilus Assembly Protein PilE-Like Protein; Type IV Pilus Biogenesis Protein; Protein Involved In Methylation; Type-4 Fimbrial Pilin-Like Transmembrane Protein; Tfp Pilus Assembly Protein; Pilus Assembly Protein PilE; Secretion Protein; Type IV PilE-Like Pilus Assembly Protein; Type IV Pilin Pile Protein; Fimbrial Protein; Type IV Pilus Assembly Protein

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MASKPRCQRARAARGFTLIELMITVAIVGILAIIAYPSYVQYIVRSNRAAAESFMQEVAAAQERFLLDNRAYAPDLTTLQ
YASNVPANVSPNYTFTLSASSVPPSYQLAATPQGSQQANDAACGTLTLTNTGAKVASTGASNCWK

Sequences:

>Translated_145_residues
MASKPRCQRARAARGFTLIELMITVAIVGILAIIAYPSYVQYIVRSNRAAAESFMQEVAAAQERFLLDNRAYAPDLTTLQ
YASNVPANVSPNYTFTLSASSVPPSYQLAATPQGSQQANDAACGTLTLTNTGAKVASTGASNCWK
>Mature_144_residues
ASKPRCQRARAARGFTLIELMITVAIVGILAIIAYPSYVQYIVRSNRAAAESFMQEVAAAQERFLLDNRAYAPDLTTLQY
ASNVPANVSPNYTFTLSASSVPPSYQLAATPQGSQQANDAACGTLTLTNTGAKVASTGASNCWK

Specific function: Unknown

COG id: COG4968

COG function: function code NU; Tfp pilus assembly protein PilE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15442; Mature: 15310

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASKPRCQRARAARGFTLIELMITVAIVGILAIIAYPSYVQYIVRSNRAAAESFMQEVAA
CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
AQERFLLDNRAYAPDLTTLQYASNVPANVSPNYTFTLSASSVPPSYQLAATPQGSQQAND
HHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCC
AACGTLTLTNTGAKVASTGASNCWK
CCCEEEEEECCCCHHHCCCCCCCCC
>Mature Secondary Structure 
ASKPRCQRARAARGFTLIELMITVAIVGILAIIAYPSYVQYIVRSNRAAAESFMQEVAA
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
AQERFLLDNRAYAPDLTTLQYASNVPANVSPNYTFTLSASSVPPSYQLAATPQGSQQAND
HHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCC
AACGTLTLTNTGAKVASTGASNCWK
CCCEEEEEECCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA