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The map label for this gene is kipR [H]

Identifier: 187929868

GI number: 187929868

Start: 2908835

End: 2909605

Strand: Reverse

Name: kipR [H]

Synonym: Rpic_2799

Alternate gene names: 187929868

Gene position: 2909605-2908835 (Counterclockwise)

Preceding gene: 187929869

Following gene: 187929867

Centisome position: 73.8

GC content: 68.09

Gene sequence:

>771_bases
ATGACCGAGCCGGGCCAGGCACCTTCACCAGCTCAATCCGCTGCCGCTACCAGCGGCTCGGACCGCGTGCTGATGGTGCT
CGCCACCATCGCGCGCCACGGCCGCCCGGTTGCGGCGCGCGAGCTGGTCGAACTGACCGGCCTGCCGCAGAGCACGCTCT
ACCGTCAGGTCGCGATGCTCAAGCGCTGGGGGTTCGTGCTCGAATCGGCCGGCACCTATGCCCCGGGGCCGATCAGCTTG
CAGCTCGCACTCGGTTTCGACCACGCTTCGCATCTGGTGCAGGAAGCGCGCATTGGCATGGCCAAACTCGTGGTCGAGTC
GGGCGAATCGGTGGGGCTGGTCGTGGCCGTGAAGGATCAGGCCGTCTGCCTCGAGATGGTCGAGAGCCAGCAGTCGCTGC
GCTGCTCGTTCGAGAAAGGGCGCGGGGTGCCCCTGCTGGCCGGCGCTTCCGCCAAGTCGTTGCTCGCCTTCATGCCGCCC
GCTGCGGCGCGCGCCATCCTCGCTGACTTGCTGGCCGTCGATGCCGACACCCAGGCGCAATTGCAAGCCGAACTCAATGA
CATTCGCGCCGCCGGTTATGCGCTGTCCGAAGGCGAGGTCGACCCGGGCGTCTGGGGCGTGAGCGTGCCGGTGTTCCGGC
TGCCCGGCCACGCGCTCGGCTCCATCACATTGATGGCGCCTGCAACGCGCGTGCGCGGCAAGGAGCAGCGCCTGATCGAC
ATGACCGTTGCAGCGGCTGCGTCCATTTCTGCGCGATTGCAGGACCTCTGA

Upstream 100 bases:

>100_bases
CTGAATTCGCAATCCATTCCCGTTGGGTGGGAATGTCACGTTGATGTATTGAGAAAATCGTCGCATTCTCCGTCGCAACA
TCACTCGACGGAGTTTCGCG

Downstream 100 bases:

>100_bases
ATTTTCGATTTTTCCGCTTCGTTTTTTTCTCACCCCACATGCATCACACAAGGAGACCACTCATGGGGAATCGTCGTCAG
TTCATGCATTCGATGCTGGC

Product: IclR family transcriptional regulator

Products: NA

Alternate protein names: Kip operon repressor protein [H]

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MTEPGQAPSPAQSAAATSGSDRVLMVLATIARHGRPVAARELVELTGLPQSTLYRQVAMLKRWGFVLESAGTYAPGPISL
QLALGFDHASHLVQEARIGMAKLVVESGESVGLVVAVKDQAVCLEMVESQQSLRCSFEKGRGVPLLAGASAKSLLAFMPP
AAARAILADLLAVDADTQAQLQAELNDIRAAGYALSEGEVDPGVWGVSVPVFRLPGHALGSITLMAPATRVRGKEQRLID
MTVAAAASISARLQDL

Sequences:

>Translated_256_residues
MTEPGQAPSPAQSAAATSGSDRVLMVLATIARHGRPVAARELVELTGLPQSTLYRQVAMLKRWGFVLESAGTYAPGPISL
QLALGFDHASHLVQEARIGMAKLVVESGESVGLVVAVKDQAVCLEMVESQQSLRCSFEKGRGVPLLAGASAKSLLAFMPP
AAARAILADLLAVDADTQAQLQAELNDIRAAGYALSEGEVDPGVWGVSVPVFRLPGHALGSITLMAPATRVRGKEQRLID
MTVAAAASISARLQDL
>Mature_255_residues
TEPGQAPSPAQSAAATSGSDRVLMVLATIARHGRPVAARELVELTGLPQSTLYRQVAMLKRWGFVLESAGTYAPGPISLQ
LALGFDHASHLVQEARIGMAKLVVESGESVGLVVAVKDQAVCLEMVESQQSLRCSFEKGRGVPLLAGASAKSLLAFMPPA
AARAILADLLAVDADTQAQLQAELNDIRAAGYALSEGEVDPGVWGVSVPVFRLPGHALGSITLMAPATRVRGKEQRLIDM
TVAAAASISARLQDL

Specific function: Transcriptional repressor of the kip gene-containing operon [H]

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]

Homologues:

Organism=Escherichia coli, GI87082359, Length=237, Percent_Identity=26.1603375527426, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014757
- InterPro:   IPR005471
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]

EC number: NA

Molecular weight: Translated: 26756; Mature: 26625

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEPGQAPSPAQSAAATSGSDRVLMVLATIARHGRPVAARELVELTGLPQSTLYRQVAML
CCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHH
KRWGFVLESAGTYAPGPISLQLALGFDHASHLVQEARIGMAKLVVESGESVGLVVAVKDQ
HHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCH
AVCLEMVESQQSLRCSFEKGRGVPLLAGASAKSLLAFMPPAAARAILADLLAVDADTQAQ
HHHHHHHHHHHHHEEHHHCCCCCEEEECCCHHHHHHHCCCHHHHHHHHHHHHCCCCCHHH
LQAELNDIRAAGYALSEGEVDPGVWGVSVPVFRLPGHALGSITLMAPATRVRGKEQRLID
HHHHHHHHHHHCEECCCCCCCCCCEECCCCEEECCCCHHCCEEEECCHHHHCCCHHHHHH
MTVAAAASISARLQDL
HHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TEPGQAPSPAQSAAATSGSDRVLMVLATIARHGRPVAARELVELTGLPQSTLYRQVAML
CCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHH
KRWGFVLESAGTYAPGPISLQLALGFDHASHLVQEARIGMAKLVVESGESVGLVVAVKDQ
HHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCH
AVCLEMVESQQSLRCSFEKGRGVPLLAGASAKSLLAFMPPAAARAILADLLAVDADTQAQ
HHHHHHHHHHHHHEEHHHCCCCCEEEECCCHHHHHHHCCCHHHHHHHHHHHHCCCCCHHH
LQAELNDIRAAGYALSEGEVDPGVWGVSVPVFRLPGHALGSITLMAPATRVRGKEQRLID
HHHHHHHHHHHCEECCCCCCCCCCEECCCCEEECCCCHHCCEEEECCHHHHCCCHHHHHH
MTVAAAASISARLQDL
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]