| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
Click here to switch to the map view.
The map label for this gene is 187929771
Identifier: 187929771
GI number: 187929771
Start: 2814709
End: 2815737
Strand: Reverse
Name: 187929771
Synonym: Rpic_2701
Alternate gene names: NA
Gene position: 2815737-2814709 (Counterclockwise)
Preceding gene: 187929775
Following gene: 187929770
Centisome position: 71.42
GC content: 68.51
Gene sequence:
>1029_bases ATGGTGGTCAATCCGGCAGCACGTCCGATGGTGAATCAGTTAGTCGTTCGGCCATCCAAATCCGCACTACGCTTGGGCCT TCCCCGCGTGCTGATCGTCGGCTGCGGCGACGTCGGGCAACGCTGCCTGGCGATGCTCCGCACGCGTTTTCGCGTCTTTG CCGTCACCTCGCGCCTTGAAGGTCGAGCTTCGCTGCGCGAAGCCGGCGCCGTGCCGATTGTCGCCAATCTGGACGATGCC GCATCGCTGCGCCGCCTGCGAGGGTTAAGCCCCCGCGTGTTGCATCTGGCACCGCCGCCCGCTGTCGGCAACGATGATCC ACGTACGGCCGCGCTGCTGCATACGCTGGCGCAGCCGTCCCCGAATTCCGCCGCCACAAAACGTCGCATTTTACCCGAGC GGGCGCGCAGGACGGGTGGCCTCACTGGCCGCTTGAAAACTCACCTCCAAGCGCGCGCGTTCGTGTACGCCAGCACCAGC GGCGTCTACGGCGATGCGGCTGGCGCCTGGGTCGACGAATCCCGCCCGGTGAAGCCAACCACGGCGCGTGCCCAACGCCG GGTCGCGGCCGAGCGGCGCGTGCGCTGGTTTGGCGCGGGCGGCGGCTGGCGCACGTCGATCTTGCGCATCCCCGGCATTT ATGCGGCGGATCGGCTACCCATCGCGCGGCTCGAACGCGGTACGCCCGCCTTGCGCGCGGAGGACGATGTCTACACCAAC CACATTCACGCCGACGACCTGGCGCGCGCGGTCATTGCCGCCCTGTTCCGGGGGAGACCGCAGCGCATCGTGCATGCCAC AGATGCATCGGAGCTGCGCATGGGCGATTACTTTGACGCCGTGGCCGACGCGCGCGGCTTGCAGCGCCCGCCGCGCATTT CCCGCGCGGAGGCCCTCCAGCAGATCGAGCCTGCGCTGCTGTCCTTCATGAGCGAATCGCGCCGGCTGCGCAACACGCGG CTTGCGCGCGAGTTGCGCGTGGCGCTGCGCTACCCGACGGTGGCGGATTTCCTGAGCAGCGAGGTCTGA
Upstream 100 bases:
>100_bases CTGGAACTGGCGGCCGCTGGGCAACACGTTGATCTGGTAAGCCATACTACAATCCGAGAATATGTTGAAAAGAGTGTCTG GTCGCCCGTCTGGGCATGCA
Downstream 100 bases:
>100_bases CGTGAAGGCGCCTGAGCCCGCCCCTGCAACGTCGTCGCACGGCGCCTGGCTGCGCGTTGCGCCGCTGGCGCTTTGGCTGT CGGTGGCGGTGGTGGGCGTA
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; Oxidoreductase Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Nucleoside-Diphosphate-Sugar Epimerases; NAD Dependent Epimerase/Dehydratase; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein; Epimerase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Oxidoreductase; NAD-Dependent Epimerase; NAD Dependent Epimerase/Dehydratase Family; Sugar Epimerase/Dehydratase-Like Protein
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MVVNPAARPMVNQLVVRPSKSALRLGLPRVLIVGCGDVGQRCLAMLRTRFRVFAVTSRLEGRASLREAGAVPIVANLDDA ASLRRLRGLSPRVLHLAPPPAVGNDDPRTAALLHTLAQPSPNSAATKRRILPERARRTGGLTGRLKTHLQARAFVYASTS GVYGDAAGAWVDESRPVKPTTARAQRRVAAERRVRWFGAGGGWRTSILRIPGIYAADRLPIARLERGTPALRAEDDVYTN HIHADDLARAVIAALFRGRPQRIVHATDASELRMGDYFDAVADARGLQRPPRISRAEALQQIEPALLSFMSESRRLRNTR LARELRVALRYPTVADFLSSEV
Sequences:
>Translated_342_residues MVVNPAARPMVNQLVVRPSKSALRLGLPRVLIVGCGDVGQRCLAMLRTRFRVFAVTSRLEGRASLREAGAVPIVANLDDA ASLRRLRGLSPRVLHLAPPPAVGNDDPRTAALLHTLAQPSPNSAATKRRILPERARRTGGLTGRLKTHLQARAFVYASTS GVYGDAAGAWVDESRPVKPTTARAQRRVAAERRVRWFGAGGGWRTSILRIPGIYAADRLPIARLERGTPALRAEDDVYTN HIHADDLARAVIAALFRGRPQRIVHATDASELRMGDYFDAVADARGLQRPPRISRAEALQQIEPALLSFMSESRRLRNTR LARELRVALRYPTVADFLSSEV >Mature_342_residues MVVNPAARPMVNQLVVRPSKSALRLGLPRVLIVGCGDVGQRCLAMLRTRFRVFAVTSRLEGRASLREAGAVPIVANLDDA ASLRRLRGLSPRVLHLAPPPAVGNDDPRTAALLHTLAQPSPNSAATKRRILPERARRTGGLTGRLKTHLQARAFVYASTS GVYGDAAGAWVDESRPVKPTTARAQRRVAAERRVRWFGAGGGWRTSILRIPGIYAADRLPIARLERGTPALRAEDDVYTN HIHADDLARAVIAALFRGRPQRIVHATDASELRMGDYFDAVADARGLQRPPRISRAEALQQIEPALLSFMSESRRLRNTR LARELRVALRYPTVADFLSSEV
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37519; Mature: 37519
Theoretical pI: Translated: 12.04; Mature: 12.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVNPAARPMVNQLVVRPSKSALRLGLPRVLIVGCGDVGQRCLAMLRTRFRVFAVTSRLE CCCCCHHHHHHHHHHCCCCHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHC GRASLREAGAVPIVANLDDAASLRRLRGLSPRVLHLAPPPAVGNDDPRTAALLHTLAQPS CHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCC PNSAATKRRILPERARRTGGLTGRLKTHLQARAFVYASTSGVYGDAAGAWVDESRPVKPT CCHHHHHHHHCHHHHHHCCCCCHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCH TARAQRRVAAERRVRWFGAGGGWRTSILRIPGIYAADRLPIARLERGTPALRAEDDVYTN HHHHHHHHHHHHHEEEEECCCCHHHHEEECCCCCCCCCCCHHHHCCCCCCCCCCCCHHHC HIHADDLARAVIAALFRGRPQRIVHATDASELRMGDYFDAVADARGLQRPPRISRAEALQ CCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHH QIEPALLSFMSESRRLRNTRLARELRVALRYPTVADFLSSEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC >Mature Secondary Structure MVVNPAARPMVNQLVVRPSKSALRLGLPRVLIVGCGDVGQRCLAMLRTRFRVFAVTSRLE CCCCCHHHHHHHHHHCCCCHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHC GRASLREAGAVPIVANLDDAASLRRLRGLSPRVLHLAPPPAVGNDDPRTAALLHTLAQPS CHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCC PNSAATKRRILPERARRTGGLTGRLKTHLQARAFVYASTSGVYGDAAGAWVDESRPVKPT CCHHHHHHHHCHHHHHHCCCCCHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCH TARAQRRVAAERRVRWFGAGGGWRTSILRIPGIYAADRLPIARLERGTPALRAEDDVYTN HHHHHHHHHHHHHEEEEECCCCHHHHEEECCCCCCCCCCCHHHHCCCCCCCCCCCCHHHC HIHADDLARAVIAALFRGRPQRIVHATDASELRMGDYFDAVADARGLQRPPRISRAEALQ CCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHH QIEPALLSFMSESRRLRNTRLARELRVALRYPTVADFLSSEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA