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The map label for this gene is ydhP [H]

Identifier: 187929767

GI number: 187929767

Start: 2809226

End: 2810428

Strand: Reverse

Name: ydhP [H]

Synonym: Rpic_2696

Alternate gene names: 187929767

Gene position: 2810428-2809226 (Counterclockwise)

Preceding gene: 187929770

Following gene: 187929766

Centisome position: 71.28

GC content: 67.41

Gene sequence:

>1203_bases
ATGAACCCCACCCACACTTCCGCCGAGCCCACACGCGGCAGCGCAACGCTGCCGCTGCTCGCGCTTGCCGCCGGCGCCTT
TGGCATCGGCACCACCGAGTTTTCTCCGATGGGCCTGCTGCCCGTGATTGCCGACGGCGTGCATGTATCGATTCCGCAGG
CAGGCATGCTGATCAGCGCGTACGCCATCGGCGTGATGGTGGGCGCCCCGATCATGACGTTGCTGCTGGCACGCTGGCCG
CGACGCAAGGCGCTGATCGCGCTGATGAGCATCTTCACCATCGGCAATTTGCTTTCGGCCCTCGCGCCGGATTACACGAC
GTTGCTGCTCGCCCGGCTCGTCACCAGTCTCAACCACGGCGCATTCTTCGGGCTTGGCTCGGTGGTGGCCGCCAGCCTTG
TGCCGCGCGAGAAGCAGGCCAGCGCCGTGGCCACGATGTTCATGGGCCTGACGATCGCCAACGTTGGCGGCGTGCCGGCC
GCGACCTGGCTTGGCCAGATGATCGGCTGGCGCATGTCGTTTGCCGCCACGGCAAGCCTTGGCCTGATCGCCATTGCGGG
CTTGTTCACTGCGTTGCCGAAGGGCGATGCCGGCAAGATGCCCAACCTGCGCGCCGAACTCGCGGTCCTGACGCGTCCCG
TCGTGCTGGGCGCGCTCGCCACCACGGTGCTCGGCGCGGGCGCGATGTTCACGCTCTACACGTATGTTGCTCCAACGCTT
GCGCAACTGACCGGTGCTTCGCCGGCGTTTGTGACGGCCATGCTGGTGCTGATCGGCATCGGCTTTTCGATCGGCAACAT
TGCCGGCGGCCGCCTGGCCGATCGCTCGCTCGATGGCAGCCTGATCGGCTTCCTGGTGTTGTTGATCGTAACGATGCTCG
CGTTTCCCGTGTTGGCCAAGACGCACGTCGGTGCCGCCGCCGCGTTGCTGGTGTGGGGCATTGCCACGTTCGCAGTCGTG
CCGCCGCTCCAGATGCGCGTGATGCGTGCCGCGGCTGAAGCGCCGGGCCTTGCATCGTCGGTCAACGTGGGCGCGTTCAA
CCTCGGCAACGCGCTGGGCGCGGCAGCGGGCGGTGCGGCCATCTCCGCAGGCCTGGGCTATGCGGCGGTGCCGATTGTCG
GCGCGGTGATTGCTGTGGCAGGCCTTGCGCTGGTGGGGCTGCACGTCGTGCAGCGTCGGGCGCGCTTCGCCATGAACCCC
TGA

Upstream 100 bases:

>100_bases
CGTATTTCCGCCGGAATCGTCGCCCGCTTGCTGAAACGTTTGCGGAAATCGCGGCAGAGGTTCTGCCCGCTTTCCATTCT
TCCGCTTTGGAGTACACCGC

Downstream 100 bases:

>100_bases
TTCGATTTCCCCTGGAGCACAAGATGAACAAGATTCCCGCTTTCGGCCTCGGCACGTTCCGCCTGAAGGGCCAGGTCGTC
ATCGACTCGGTTCGCAATGG

Product: major facilitator superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MNPTHTSAEPTRGSATLPLLALAAGAFGIGTTEFSPMGLLPVIADGVHVSIPQAGMLISAYAIGVMVGAPIMTLLLARWP
RRKALIALMSIFTIGNLLSALAPDYTTLLLARLVTSLNHGAFFGLGSVVAASLVPREKQASAVATMFMGLTIANVGGVPA
ATWLGQMIGWRMSFAATASLGLIAIAGLFTALPKGDAGKMPNLRAELAVLTRPVVLGALATTVLGAGAMFTLYTYVAPTL
AQLTGASPAFVTAMLVLIGIGFSIGNIAGGRLADRSLDGSLIGFLVLLIVTMLAFPVLAKTHVGAAAALLVWGIATFAVV
PPLQMRVMRAAAEAPGLASSVNVGAFNLGNALGAAAGGAAISAGLGYAAVPIVGAVIAVAGLALVGLHVVQRRARFAMNP

Sequences:

>Translated_400_residues
MNPTHTSAEPTRGSATLPLLALAAGAFGIGTTEFSPMGLLPVIADGVHVSIPQAGMLISAYAIGVMVGAPIMTLLLARWP
RRKALIALMSIFTIGNLLSALAPDYTTLLLARLVTSLNHGAFFGLGSVVAASLVPREKQASAVATMFMGLTIANVGGVPA
ATWLGQMIGWRMSFAATASLGLIAIAGLFTALPKGDAGKMPNLRAELAVLTRPVVLGALATTVLGAGAMFTLYTYVAPTL
AQLTGASPAFVTAMLVLIGIGFSIGNIAGGRLADRSLDGSLIGFLVLLIVTMLAFPVLAKTHVGAAAALLVWGIATFAVV
PPLQMRVMRAAAEAPGLASSVNVGAFNLGNALGAAAGGAAISAGLGYAAVPIVGAVIAVAGLALVGLHVVQRRARFAMNP
>Mature_400_residues
MNPTHTSAEPTRGSATLPLLALAAGAFGIGTTEFSPMGLLPVIADGVHVSIPQAGMLISAYAIGVMVGAPIMTLLLARWP
RRKALIALMSIFTIGNLLSALAPDYTTLLLARLVTSLNHGAFFGLGSVVAASLVPREKQASAVATMFMGLTIANVGGVPA
ATWLGQMIGWRMSFAATASLGLIAIAGLFTALPKGDAGKMPNLRAELAVLTRPVVLGALATTVLGAGAMFTLYTYVAPTL
AQLTGASPAFVTAMLVLIGIGFSIGNIAGGRLADRSLDGSLIGFLVLLIVTMLAFPVLAKTHVGAAAALLVWGIATFAVV
PPLQMRVMRAAAEAPGLASSVNVGAFNLGNALGAAAGGAAISAGLGYAAVPIVGAVIAVAGLALVGLHVVQRRARFAMNP

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=376, Percent_Identity=73.6702127659574, Blast_Score=504, Evalue=1e-144,
Organism=Escherichia coli, GI1786595, Length=385, Percent_Identity=33.7662337662338, Blast_Score=197, Evalue=1e-51,
Organism=Escherichia coli, GI1787808, Length=389, Percent_Identity=30.3341902313625, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI145693198, Length=331, Percent_Identity=27.4924471299094, Blast_Score=110, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40306; Mature: 40306

Theoretical pI: Translated: 11.41; Mature: 11.41

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPTHTSAEPTRGSATLPLLALAAGAFGIGTTEFSPMGLLPVIADGVHVSIPQAGMLISA
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCEEECCCCHHHHHH
YAIGVMVGAPIMTLLLARWPRRKALIALMSIFTIGNLLSALAPDYTTLLLARLVTSLNHG
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
AFFGLGSVVAASLVPREKQASAVATMFMGLTIANVGGVPAATWLGQMIGWRMSFAATASL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
GLIAIAGLFTALPKGDAGKMPNLRAELAVLTRPVVLGALATTVLGAGAMFTLYTYVAPTL
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AQLTGASPAFVTAMLVLIGIGFSIGNIAGGRLADRSLDGSLIGFLVLLIVTMLAFPVLAK
HHHCCCCHHHHHHHHHHHHCCCHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
THVGAAAALLVWGIATFAVVPPLQMRVMRAAAEAPGLASSVNVGAFNLGNALGAAAGGAA
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHCCCHH
ISAGLGYAAVPIVGAVIAVAGLALVGLHVVQRRARFAMNP
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNPTHTSAEPTRGSATLPLLALAAGAFGIGTTEFSPMGLLPVIADGVHVSIPQAGMLISA
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCEEECCCCHHHHHH
YAIGVMVGAPIMTLLLARWPRRKALIALMSIFTIGNLLSALAPDYTTLLLARLVTSLNHG
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
AFFGLGSVVAASLVPREKQASAVATMFMGLTIANVGGVPAATWLGQMIGWRMSFAATASL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
GLIAIAGLFTALPKGDAGKMPNLRAELAVLTRPVVLGALATTVLGAGAMFTLYTYVAPTL
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AQLTGASPAFVTAMLVLIGIGFSIGNIAGGRLADRSLDGSLIGFLVLLIVTMLAFPVLAK
HHHCCCCHHHHHHHHHHHHCCCHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
THVGAAAALLVWGIATFAVVPPLQMRVMRAAAEAPGLASSVNVGAFNLGNALGAAAGGAA
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHCCCHH
ISAGLGYAAVPIVGAVIAVAGLALVGLHVVQRRARFAMNP
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]