| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187929748
Identifier: 187929748
GI number: 187929748
Start: 2790031
End: 2790456
Strand: Reverse
Name: 187929748
Synonym: Rpic_2677
Alternate gene names: NA
Gene position: 2790456-2790031 (Counterclockwise)
Preceding gene: 187929749
Following gene: 187929746
Centisome position: 70.78
GC content: 69.48
Gene sequence:
>426_bases ATGACCGACGGACGTTATCCCAGGTCCCACGCGGACAACAACATCCCTGTTCTGACGGAGATCGTCGAATTGGAGGACGC GGCACCCGCGGCAGCGCCCGCTGCGCCGCCGCGCGCGCCTGCTGAAGTGCCCAACGTGGACGTCCCGCCCGCCCTGCGCG AGCAGGGGCTTGCGCCCACGTCGGCCATGCCGCCCGCAGGCACTGATGCCGCCCGCGTGATGGGCGACGTGATGTGGCGT TTTCAATCCGAATGGCCGGCGTTGATCGAAGCGCAGTGCCGTGCCGCCATGGAGTCGCGCCTATCGCTGCTGAGCGAACA GTTGGCGGCGGAGCTGACCCGTACGCTGGAGGCCCGCCTGATGGATTGGCTGGGCGCCGCGCTGGACGATGCGCTGGCTG CGCAGCAGAAGCCGCCGCAGCGCTGA
Upstream 100 bases:
>100_bases TCGTGGGCGATGACGATGCCGATCGTGCCGCTGCGCGCGATCGCTTCCGTTTCTACCGCGATCGCGGTTATCCGATCCAA CACCACGACGTGGGGCGCGC
Downstream 100 bases:
>100_bases TCGGATCAAGAAAAACCCGCCGTGTGGCGGGTTTTTTGTGGGTGTCGCCAACAACTCAGTCCGTTACCGCACCCTTGCTG GCCGTTGCTGCCAGTTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MTDGRYPRSHADNNIPVLTEIVELEDAAPAAAPAAPPRAPAEVPNVDVPPALREQGLAPTSAMPPAGTDAARVMGDVMWR FQSEWPALIEAQCRAAMESRLSLLSEQLAAELTRTLEARLMDWLGAALDDALAAQQKPPQR
Sequences:
>Translated_141_residues MTDGRYPRSHADNNIPVLTEIVELEDAAPAAAPAAPPRAPAEVPNVDVPPALREQGLAPTSAMPPAGTDAARVMGDVMWR FQSEWPALIEAQCRAAMESRLSLLSEQLAAELTRTLEARLMDWLGAALDDALAAQQKPPQR >Mature_140_residues TDGRYPRSHADNNIPVLTEIVELEDAAPAAAPAAPPRAPAEVPNVDVPPALREQGLAPTSAMPPAGTDAARVMGDVMWRF QSEWPALIEAQCRAAMESRLSLLSEQLAAELTRTLEARLMDWLGAALDDALAAQQKPPQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15145; Mature: 15014
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDGRYPRSHADNNIPVLTEIVELEDAAPAAAPAAPPRAPAEVPNVDVPPALREQGLAPT CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCC SAMPPAGTDAARVMGDVMWRFQSEWPALIEAQCRAAMESRLSLLSEQLAAELTRTLEARL CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MDWLGAALDDALAAQQKPPQR HHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TDGRYPRSHADNNIPVLTEIVELEDAAPAAAPAAPPRAPAEVPNVDVPPALREQGLAPT CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCC SAMPPAGTDAARVMGDVMWRFQSEWPALIEAQCRAAMESRLSLLSEQLAAELTRTLEARL CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MDWLGAALDDALAAQQKPPQR HHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA