| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is lgt
Identifier: 187929745
GI number: 187929745
Start: 2786312
End: 2787214
Strand: Reverse
Name: lgt
Synonym: Rpic_2674
Alternate gene names: 187929745
Gene position: 2787214-2786312 (Counterclockwise)
Preceding gene: 187929746
Following gene: 187929744
Centisome position: 70.7
GC content: 64.12
Gene sequence:
>903_bases ATGCTCATCCATCCGCAATTCGACCCCGTCGCCCTGCATCTGGGGCCGCTCGCCATCCGCTGGTACGGCCTGATGTATCT GGCGGCGTTCATCATGTTCCTGTGGTTCGGCCGACTGCGCACGCGCCAGCCGCACATCGCGGCCGAAGGCTGGACCGGCC GCGACCTTGACGACATGCTCTTCTACGGCGTGCTCGGTGTGATTCTCGGCGGGCGCCTGGGATACGTGCTGTTCTACAAG CCCGACTGGTATTTCGCCCACCCGCTCGACATCTTCAAGGTCTGGGAAGGCGGCATGGCCTTCCATGGCGGCTTCCTCGG TGTGGTCGTGGCGATGATGCTGTATGCGCGCATGCGCGGTCGATCGTGGATGCAGGTGACTGATTTCATCGCGCCGATGG TCCCGTGCGGTCTCGCAGCGGGGCGCCTTGGCAACTTCATCAACGGCGAGCTGTGGGGCCGTGTGTCGTCGCCCAACCTG CCGTGGTCGATGATGTTCCCGCAGGCACAGGGCGAAGACCGTGAATGGTTGCTTTCGCATGCGCAAGAGGCCGTCACCAG CGGCCTGCAGGCCGTTTTTGACCAGTACCACATGCTGCCGCGCCACCCCTCGCAGATCTACCAGTTCCTCGGCGAGGGCG TGCTGTTCTTCATCCTGCTGTGGCTGTATGCGCGCAAGCCGCGGCCGATGGGCGCGGTGTCCGGCGCATTCCTGCTTGGC TACGGCGTGTTCCGCTTCGCCGCGGAATTCGCGCGTGAGCCGGACAACTTCCTGGGCCTGCTCGCGGCGAACCTGTCGAT GGGCCAGTGGCTGTCGCTGCCAATGATCCTGATCGGCATCGCCATGCTGGTCTGGTCCTATCGTCGTGCAGGCAACGGTG AAAAAAACCAGGCGCACGCCTGA
Upstream 100 bases:
>100_bases GACGCGATGCCGCTTCGCCGGTGCTGCCGTGGTTCGTGTCCAGTGCCGAAGCCGTCGCCAAGCTGCAAGAAGACAACCAA ACCTGAAACCCACAGGATTC
Downstream 100 bases:
>100_bases CGCAGCAACCGCGCAAAGAAAAAGCCACCGAACTTCGGTGGCTTTTTTCATGGAGCTGACCCGTCCTGAATAAGGTTGAC ACTTTTTCCCCGCCAGGGAG
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MLIHPQFDPVALHLGPLAIRWYGLMYLAAFIMFLWFGRLRTRQPHIAAEGWTGRDLDDMLFYGVLGVILGGRLGYVLFYK PDWYFAHPLDIFKVWEGGMAFHGGFLGVVVAMMLYARMRGRSWMQVTDFIAPMVPCGLAAGRLGNFINGELWGRVSSPNL PWSMMFPQAQGEDREWLLSHAQEAVTSGLQAVFDQYHMLPRHPSQIYQFLGEGVLFFILLWLYARKPRPMGAVSGAFLLG YGVFRFAAEFAREPDNFLGLLAANLSMGQWLSLPMILIGIAMLVWSYRRAGNGEKNQAHA
Sequences:
>Translated_300_residues MLIHPQFDPVALHLGPLAIRWYGLMYLAAFIMFLWFGRLRTRQPHIAAEGWTGRDLDDMLFYGVLGVILGGRLGYVLFYK PDWYFAHPLDIFKVWEGGMAFHGGFLGVVVAMMLYARMRGRSWMQVTDFIAPMVPCGLAAGRLGNFINGELWGRVSSPNL PWSMMFPQAQGEDREWLLSHAQEAVTSGLQAVFDQYHMLPRHPSQIYQFLGEGVLFFILLWLYARKPRPMGAVSGAFLLG YGVFRFAAEFAREPDNFLGLLAANLSMGQWLSLPMILIGIAMLVWSYRRAGNGEKNQAHA >Mature_300_residues MLIHPQFDPVALHLGPLAIRWYGLMYLAAFIMFLWFGRLRTRQPHIAAEGWTGRDLDDMLFYGVLGVILGGRLGYVLFYK PDWYFAHPLDIFKVWEGGMAFHGGFLGVVVAMMLYARMRGRSWMQVTDFIAPMVPCGLAAGRLGNFINGELWGRVSSPNL PWSMMFPQAQGEDREWLLSHAQEAVTSGLQAVFDQYHMLPRHPSQIYQFLGEGVLFFILLWLYARKPRPMGAVSGAFLLG YGVFRFAAEFAREPDNFLGLLAANLSMGQWLSLPMILIGIAMLVWSYRRAGNGEKNQAHA
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family
Homologues:
Organism=Escherichia coli, GI1789192, Length=287, Percent_Identity=54.7038327526132, Blast_Score=314, Evalue=4e-87,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LGT_RALPJ (B2UAK3)
Other databases:
- EMBL: CP001068 - RefSeq: YP_001900232.1 - GeneID: 6287149 - GenomeReviews: CP001068_GR - KEGG: rpi:Rpic_2674 - HOGENOM: HBG450278 - OMA: NPIAFSL - ProtClustDB: PRK00052 - HAMAP: MF_01147 - InterPro: IPR001640 - TIGRFAMs: TIGR00544
Pfam domain/function: PF01790 LGT
EC number: 2.4.99.- [C]
Molecular weight: Translated: 33972; Mature: 33972
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x17ec4894)-; HASH(0x1789ce4c)-; HASH(0x17aa6114)-; HASH(0x16db6418)-; HASH(0x17b0b1ac)-; HASH(0x16988a18)-; HASH(0x17895e08)-;
Cys/Met content:
0.3 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIHPQFDPVALHLGPLAIRWYGLMYLAAFIMFLWFGRLRTRQPHIAAEGWTGRDLDDML CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHH FYGVLGVILGGRLGYVLFYKPDWYFAHPLDIFKVWEGGMAFHGGFLGVVVAMMLYARMRG HHHHHHHHHCCCCCEEEEECCCCEEECHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHC RSWMQVTDFIAPMVPCGLAAGRLGNFINGELWGRVSSPNLPWSMMFPQAQGEDREWLLSH CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCEEEECCCCCCCCHHHHHHH AQEAVTSGLQAVFDQYHMLPRHPSQIYQFLGEGVLFFILLWLYARKPRPMGAVSGAFLLG HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH YGVFRFAAEFAREPDNFLGLLAANLSMGQWLSLPMILIGIAMLVWSYRRAGNGEKNQAHA HHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH >Mature Secondary Structure MLIHPQFDPVALHLGPLAIRWYGLMYLAAFIMFLWFGRLRTRQPHIAAEGWTGRDLDDML CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHH FYGVLGVILGGRLGYVLFYKPDWYFAHPLDIFKVWEGGMAFHGGFLGVVVAMMLYARMRG HHHHHHHHHCCCCCEEEEECCCCEEECHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHC RSWMQVTDFIAPMVPCGLAAGRLGNFINGELWGRVSSPNLPWSMMFPQAQGEDREWLLSH CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCEEEECCCCCCCCHHHHHHH AQEAVTSGLQAVFDQYHMLPRHPSQIYQFLGEGVLFFILLWLYARKPRPMGAVSGAFLLG HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH YGVFRFAAEFAREPDNFLGLLAANLSMGQWLSLPMILIGIAMLVWSYRRAGNGEKNQAHA HHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA