| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187929497
Identifier: 187929497
GI number: 187929497
Start: 2518456
End: 2519715
Strand: Reverse
Name: 187929497
Synonym: Rpic_2418
Alternate gene names: NA
Gene position: 2519715-2518456 (Counterclockwise)
Preceding gene: 187929498
Following gene: 187929496
Centisome position: 63.91
GC content: 64.76
Gene sequence:
>1260_bases ATGCAATGGCGTAAATGGTTGGTCGTGCTCGCGTGCGCACCGATGGTGACAGCGTGCGGAGGAGGCGGCGATGATCCGCC GCCCCCGGTGATCCAGCGCCTGTGTCCGCAGGCCATCGACTACAACACCGTGTTCACCGGCGGGTCGGGCTCAGGTGAAC TCGTGAAGGTTCAGCTCGATACGACGAAGATGACGTACCAGATCACGTATCTGGCCTCGCCGATTCCGGTCAAGACTGGC ACTGTGGCGCCCACGCGCGATACGGCGCCCAACAACGTGCAGACCGGCACGCTCACGCAAGAGACGGCGCTGCCGACCGA GAAGCTGAACCAGTGCGCGTTCCGCCTGAACAACGCGAGCCTTGATCCGAGCCGTCCGGCGCGGTTCTTCCTGGGGCTAG GCGTGCTGGGCGGCACGATTCCGGGGGCGACGATCCAGTTCGACGGCATTGTCGGCGTGGGCAAGATTGCGCAGACCACG TTCCCGTATTACCCGTTCATCAGCTTCTCGAACACCGAGACCGATCTGACCAAGATTGCCGGCAACTACAACCAGCTCGG CTACCACCAGGTGCCGTCGCAGAACTTCTCGCAGCAGGCGGTCGATGCGCGTTTCACCATCAACGCGGACGGCACCTACA CCGAGTGCGACAACCTGGGCGTGAAGAACGGCGGAGCCTGCCTGACGTCAAGCGCGACGGTCAACCAGAAGCTGACGCTG CGCGGCGACGCGCCGGCCTTCACCACGCTGAACTATCAGCCGCAGGTGCCGGCAACCGTGTCGTCGCTCGATCCGGCCAA GGCGGGCAAGGGCGTGATGATCGTGGGCAAGCTGTATGGCCAGCTCGTGCCGATCTTCATTCGCGTCGGTGCGGCCAATT CCGACTTGACGGCCGGCCCGCCGGTGGCAGACGACGAGTCCGGCATTTCGATCATGGCACCGGTCGGCAACATCGCGCAG GGCTCGCAAGACGGCGAATACACCGGTGTGGACAGCACGTTCAACTACCGTGCCACGGCGCTGGTGGGCGCGCAGGCCAC GATGCTCGATCCGTTCAACGCGTCGCAGGCAGCGCTGGCGCGACCGCTGAACCTGGATTTCACGCAGACCGTCCCGGGCG TGATCCGGACCACGCAGACCAGCGCGCCGGCCGGCTCGGCCCCGACGGGCAAGCTGATCTTCACCGGCAAGACCTTCGGC TTCCTGGACATGAGCGATACGAAGAACCCGTACTTCACCGTGGGCGCCTTCGTGCAGTGA
Upstream 100 bases:
>100_bases CATTTGTCCAGTGAGGCGCGCATCAATGCAAGCACATCCGGTGGCGGCATGCGCAATGTGTGCGCCGCCACCTCTGAACA ACAACATGGAGGAGACGCAA
Downstream 100 bases:
>100_bases CGTTTCCGGAAACACACGCCACGGGGCGCGGCACAGAGAACCGCGCTCCGCTCAGAACAACAGGAGGAAGCATCATGAAA CAACTGACTGTCGCATTGAT
Product: putative lipoprotein
Products: NA
Alternate protein names: Large Exoprotein Involved In Heme Utilization Or Adhesion
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MQWRKWLVVLACAPMVTACGGGGDDPPPPVIQRLCPQAIDYNTVFTGGSGSGELVKVQLDTTKMTYQITYLASPIPVKTG TVAPTRDTAPNNVQTGTLTQETALPTEKLNQCAFRLNNASLDPSRPARFFLGLGVLGGTIPGATIQFDGIVGVGKIAQTT FPYYPFISFSNTETDLTKIAGNYNQLGYHQVPSQNFSQQAVDARFTINADGTYTECDNLGVKNGGACLTSSATVNQKLTL RGDAPAFTTLNYQPQVPATVSSLDPAKAGKGVMIVGKLYGQLVPIFIRVGAANSDLTAGPPVADDESGISIMAPVGNIAQ GSQDGEYTGVDSTFNYRATALVGAQATMLDPFNASQAALARPLNLDFTQTVPGVIRTTQTSAPAGSAPTGKLIFTGKTFG FLDMSDTKNPYFTVGAFVQ
Sequences:
>Translated_419_residues MQWRKWLVVLACAPMVTACGGGGDDPPPPVIQRLCPQAIDYNTVFTGGSGSGELVKVQLDTTKMTYQITYLASPIPVKTG TVAPTRDTAPNNVQTGTLTQETALPTEKLNQCAFRLNNASLDPSRPARFFLGLGVLGGTIPGATIQFDGIVGVGKIAQTT FPYYPFISFSNTETDLTKIAGNYNQLGYHQVPSQNFSQQAVDARFTINADGTYTECDNLGVKNGGACLTSSATVNQKLTL RGDAPAFTTLNYQPQVPATVSSLDPAKAGKGVMIVGKLYGQLVPIFIRVGAANSDLTAGPPVADDESGISIMAPVGNIAQ GSQDGEYTGVDSTFNYRATALVGAQATMLDPFNASQAALARPLNLDFTQTVPGVIRTTQTSAPAGSAPTGKLIFTGKTFG FLDMSDTKNPYFTVGAFVQ >Mature_419_residues MQWRKWLVVLACAPMVTACGGGGDDPPPPVIQRLCPQAIDYNTVFTGGSGSGELVKVQLDTTKMTYQITYLASPIPVKTG TVAPTRDTAPNNVQTGTLTQETALPTEKLNQCAFRLNNASLDPSRPARFFLGLGVLGGTIPGATIQFDGIVGVGKIAQTT FPYYPFISFSNTETDLTKIAGNYNQLGYHQVPSQNFSQQAVDARFTINADGTYTECDNLGVKNGGACLTSSATVNQKLTL RGDAPAFTTLNYQPQVPATVSSLDPAKAGKGVMIVGKLYGQLVPIFIRVGAANSDLTAGPPVADDESGISIMAPVGNIAQ GSQDGEYTGVDSTFNYRATALVGAQATMLDPFNASQAALARPLNLDFTQTVPGVIRTTQTSAPAGSAPTGKLIFTGKTFG FLDMSDTKNPYFTVGAFVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44051; Mature: 44051
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQWRKWLVVLACAPMVTACGGGGDDPPPPVIQRLCPQAIDYNTVFTGGSGSGELVKVQLD CCHHHEEEEEEHHHHHHHCCCCCCCCCHHHHHHHCHHHCCCCEEEECCCCCCCEEEEEEE TTKMTYQITYLASPIPVKTGTVAPTRDTAPNNVQTGTLTQETALPTEKLNQCAFRLNNAS CEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHEEECCCC LDPSRPARFFLGLGVLGGTIPGATIQFDGIVGVGKIAQTTFPYYPFISFSNTETDLTKIA CCCCCCCEEEEEHHHHCCCCCCCEEEECCEEECCHHHHHCCCCCCEEEECCCCHHHHHHC GNYNQLGYHQVPSQNFSQQAVDARFTINADGTYTECDNLGVKNGGACLTSSATVNQKLTL CCCCCCCCEECCCCCCCHHHCCEEEEEECCCCEEECCCCCCCCCCCEEECCCCCCEEEEE RGDAPAFTTLNYQPQVPATVSSLDPAKAGKGVMIVGKLYGQLVPIFIRVGAANSDLTAGP ECCCCEEEEECCCCCCCCHHCCCCCCCCCCCEEEEEHHHCCEEEEEEEECCCCCCCCCCC PVADDESGISIMAPVGNIAQGSQDGEYTGVDSTFNYRATALVGAQATMLDPFNASQAALA CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCHHHHH RPLNLDFTQTVPGVIRTTQTSAPAGSAPTGKLIFTGKTFGFLDMSDTKNPYFTVGAFVQ CCCCCCHHHCCCCEEEECCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCEEEEEEEEC >Mature Secondary Structure MQWRKWLVVLACAPMVTACGGGGDDPPPPVIQRLCPQAIDYNTVFTGGSGSGELVKVQLD CCHHHEEEEEEHHHHHHHCCCCCCCCCHHHHHHHCHHHCCCCEEEECCCCCCCEEEEEEE TTKMTYQITYLASPIPVKTGTVAPTRDTAPNNVQTGTLTQETALPTEKLNQCAFRLNNAS CEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHEEECCCC LDPSRPARFFLGLGVLGGTIPGATIQFDGIVGVGKIAQTTFPYYPFISFSNTETDLTKIA CCCCCCCEEEEEHHHHCCCCCCCEEEECCEEECCHHHHHCCCCCCEEEECCCCHHHHHHC GNYNQLGYHQVPSQNFSQQAVDARFTINADGTYTECDNLGVKNGGACLTSSATVNQKLTL CCCCCCCCEECCCCCCCHHHCCEEEEEECCCCEEECCCCCCCCCCCEEECCCCCCEEEEE RGDAPAFTTLNYQPQVPATVSSLDPAKAGKGVMIVGKLYGQLVPIFIRVGAANSDLTAGP ECCCCEEEEECCCCCCCCHHCCCCCCCCCCCEEEEEHHHCCEEEEEEEECCCCCCCCCCC PVADDESGISIMAPVGNIAQGSQDGEYTGVDSTFNYRATALVGAQATMLDPFNASQAALA CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCHHHHH RPLNLDFTQTVPGVIRTTQTSAPAGSAPTGKLIFTGKTFGFLDMSDTKNPYFTVGAFVQ CCCCCCHHHCCCCEEEECCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA