Definition Ralstonia pickettii 12J chromosome chromosome 1, complete sequence.
Accession NC_010682
Length 3,942,557

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The map label for this gene is 187929497

Identifier: 187929497

GI number: 187929497

Start: 2518456

End: 2519715

Strand: Reverse

Name: 187929497

Synonym: Rpic_2418

Alternate gene names: NA

Gene position: 2519715-2518456 (Counterclockwise)

Preceding gene: 187929498

Following gene: 187929496

Centisome position: 63.91

GC content: 64.76

Gene sequence:

>1260_bases
ATGCAATGGCGTAAATGGTTGGTCGTGCTCGCGTGCGCACCGATGGTGACAGCGTGCGGAGGAGGCGGCGATGATCCGCC
GCCCCCGGTGATCCAGCGCCTGTGTCCGCAGGCCATCGACTACAACACCGTGTTCACCGGCGGGTCGGGCTCAGGTGAAC
TCGTGAAGGTTCAGCTCGATACGACGAAGATGACGTACCAGATCACGTATCTGGCCTCGCCGATTCCGGTCAAGACTGGC
ACTGTGGCGCCCACGCGCGATACGGCGCCCAACAACGTGCAGACCGGCACGCTCACGCAAGAGACGGCGCTGCCGACCGA
GAAGCTGAACCAGTGCGCGTTCCGCCTGAACAACGCGAGCCTTGATCCGAGCCGTCCGGCGCGGTTCTTCCTGGGGCTAG
GCGTGCTGGGCGGCACGATTCCGGGGGCGACGATCCAGTTCGACGGCATTGTCGGCGTGGGCAAGATTGCGCAGACCACG
TTCCCGTATTACCCGTTCATCAGCTTCTCGAACACCGAGACCGATCTGACCAAGATTGCCGGCAACTACAACCAGCTCGG
CTACCACCAGGTGCCGTCGCAGAACTTCTCGCAGCAGGCGGTCGATGCGCGTTTCACCATCAACGCGGACGGCACCTACA
CCGAGTGCGACAACCTGGGCGTGAAGAACGGCGGAGCCTGCCTGACGTCAAGCGCGACGGTCAACCAGAAGCTGACGCTG
CGCGGCGACGCGCCGGCCTTCACCACGCTGAACTATCAGCCGCAGGTGCCGGCAACCGTGTCGTCGCTCGATCCGGCCAA
GGCGGGCAAGGGCGTGATGATCGTGGGCAAGCTGTATGGCCAGCTCGTGCCGATCTTCATTCGCGTCGGTGCGGCCAATT
CCGACTTGACGGCCGGCCCGCCGGTGGCAGACGACGAGTCCGGCATTTCGATCATGGCACCGGTCGGCAACATCGCGCAG
GGCTCGCAAGACGGCGAATACACCGGTGTGGACAGCACGTTCAACTACCGTGCCACGGCGCTGGTGGGCGCGCAGGCCAC
GATGCTCGATCCGTTCAACGCGTCGCAGGCAGCGCTGGCGCGACCGCTGAACCTGGATTTCACGCAGACCGTCCCGGGCG
TGATCCGGACCACGCAGACCAGCGCGCCGGCCGGCTCGGCCCCGACGGGCAAGCTGATCTTCACCGGCAAGACCTTCGGC
TTCCTGGACATGAGCGATACGAAGAACCCGTACTTCACCGTGGGCGCCTTCGTGCAGTGA

Upstream 100 bases:

>100_bases
CATTTGTCCAGTGAGGCGCGCATCAATGCAAGCACATCCGGTGGCGGCATGCGCAATGTGTGCGCCGCCACCTCTGAACA
ACAACATGGAGGAGACGCAA

Downstream 100 bases:

>100_bases
CGTTTCCGGAAACACACGCCACGGGGCGCGGCACAGAGAACCGCGCTCCGCTCAGAACAACAGGAGGAAGCATCATGAAA
CAACTGACTGTCGCATTGAT

Product: putative lipoprotein

Products: NA

Alternate protein names: Large Exoprotein Involved In Heme Utilization Or Adhesion

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MQWRKWLVVLACAPMVTACGGGGDDPPPPVIQRLCPQAIDYNTVFTGGSGSGELVKVQLDTTKMTYQITYLASPIPVKTG
TVAPTRDTAPNNVQTGTLTQETALPTEKLNQCAFRLNNASLDPSRPARFFLGLGVLGGTIPGATIQFDGIVGVGKIAQTT
FPYYPFISFSNTETDLTKIAGNYNQLGYHQVPSQNFSQQAVDARFTINADGTYTECDNLGVKNGGACLTSSATVNQKLTL
RGDAPAFTTLNYQPQVPATVSSLDPAKAGKGVMIVGKLYGQLVPIFIRVGAANSDLTAGPPVADDESGISIMAPVGNIAQ
GSQDGEYTGVDSTFNYRATALVGAQATMLDPFNASQAALARPLNLDFTQTVPGVIRTTQTSAPAGSAPTGKLIFTGKTFG
FLDMSDTKNPYFTVGAFVQ

Sequences:

>Translated_419_residues
MQWRKWLVVLACAPMVTACGGGGDDPPPPVIQRLCPQAIDYNTVFTGGSGSGELVKVQLDTTKMTYQITYLASPIPVKTG
TVAPTRDTAPNNVQTGTLTQETALPTEKLNQCAFRLNNASLDPSRPARFFLGLGVLGGTIPGATIQFDGIVGVGKIAQTT
FPYYPFISFSNTETDLTKIAGNYNQLGYHQVPSQNFSQQAVDARFTINADGTYTECDNLGVKNGGACLTSSATVNQKLTL
RGDAPAFTTLNYQPQVPATVSSLDPAKAGKGVMIVGKLYGQLVPIFIRVGAANSDLTAGPPVADDESGISIMAPVGNIAQ
GSQDGEYTGVDSTFNYRATALVGAQATMLDPFNASQAALARPLNLDFTQTVPGVIRTTQTSAPAGSAPTGKLIFTGKTFG
FLDMSDTKNPYFTVGAFVQ
>Mature_419_residues
MQWRKWLVVLACAPMVTACGGGGDDPPPPVIQRLCPQAIDYNTVFTGGSGSGELVKVQLDTTKMTYQITYLASPIPVKTG
TVAPTRDTAPNNVQTGTLTQETALPTEKLNQCAFRLNNASLDPSRPARFFLGLGVLGGTIPGATIQFDGIVGVGKIAQTT
FPYYPFISFSNTETDLTKIAGNYNQLGYHQVPSQNFSQQAVDARFTINADGTYTECDNLGVKNGGACLTSSATVNQKLTL
RGDAPAFTTLNYQPQVPATVSSLDPAKAGKGVMIVGKLYGQLVPIFIRVGAANSDLTAGPPVADDESGISIMAPVGNIAQ
GSQDGEYTGVDSTFNYRATALVGAQATMLDPFNASQAALARPLNLDFTQTVPGVIRTTQTSAPAGSAPTGKLIFTGKTFG
FLDMSDTKNPYFTVGAFVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44051; Mature: 44051

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQWRKWLVVLACAPMVTACGGGGDDPPPPVIQRLCPQAIDYNTVFTGGSGSGELVKVQLD
CCHHHEEEEEEHHHHHHHCCCCCCCCCHHHHHHHCHHHCCCCEEEECCCCCCCEEEEEEE
TTKMTYQITYLASPIPVKTGTVAPTRDTAPNNVQTGTLTQETALPTEKLNQCAFRLNNAS
CEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHEEECCCC
LDPSRPARFFLGLGVLGGTIPGATIQFDGIVGVGKIAQTTFPYYPFISFSNTETDLTKIA
CCCCCCCEEEEEHHHHCCCCCCCEEEECCEEECCHHHHHCCCCCCEEEECCCCHHHHHHC
GNYNQLGYHQVPSQNFSQQAVDARFTINADGTYTECDNLGVKNGGACLTSSATVNQKLTL
CCCCCCCCEECCCCCCCHHHCCEEEEEECCCCEEECCCCCCCCCCCEEECCCCCCEEEEE
RGDAPAFTTLNYQPQVPATVSSLDPAKAGKGVMIVGKLYGQLVPIFIRVGAANSDLTAGP
ECCCCEEEEECCCCCCCCHHCCCCCCCCCCCEEEEEHHHCCEEEEEEEECCCCCCCCCCC
PVADDESGISIMAPVGNIAQGSQDGEYTGVDSTFNYRATALVGAQATMLDPFNASQAALA
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCHHHHH
RPLNLDFTQTVPGVIRTTQTSAPAGSAPTGKLIFTGKTFGFLDMSDTKNPYFTVGAFVQ
CCCCCCHHHCCCCEEEECCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCEEEEEEEEC
>Mature Secondary Structure
MQWRKWLVVLACAPMVTACGGGGDDPPPPVIQRLCPQAIDYNTVFTGGSGSGELVKVQLD
CCHHHEEEEEEHHHHHHHCCCCCCCCCHHHHHHHCHHHCCCCEEEECCCCCCCEEEEEEE
TTKMTYQITYLASPIPVKTGTVAPTRDTAPNNVQTGTLTQETALPTEKLNQCAFRLNNAS
CEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHEEECCCC
LDPSRPARFFLGLGVLGGTIPGATIQFDGIVGVGKIAQTTFPYYPFISFSNTETDLTKIA
CCCCCCCEEEEEHHHHCCCCCCCEEEECCEEECCHHHHHCCCCCCEEEECCCCHHHHHHC
GNYNQLGYHQVPSQNFSQQAVDARFTINADGTYTECDNLGVKNGGACLTSSATVNQKLTL
CCCCCCCCEECCCCCCCHHHCCEEEEEECCCCEEECCCCCCCCCCCEEECCCCCCEEEEE
RGDAPAFTTLNYQPQVPATVSSLDPAKAGKGVMIVGKLYGQLVPIFIRVGAANSDLTAGP
ECCCCEEEEECCCCCCCCHHCCCCCCCCCCCEEEEEHHHCCEEEEEEEECCCCCCCCCCC
PVADDESGISIMAPVGNIAQGSQDGEYTGVDSTFNYRATALVGAQATMLDPFNASQAALA
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCHHHHH
RPLNLDFTQTVPGVIRTTQTSAPAGSAPTGKLIFTGKTFGFLDMSDTKNPYFTVGAFVQ
CCCCCCHHHCCCCEEEECCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA