| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187929498
Identifier: 187929498
GI number: 187929498
Start: 2519802
End: 2521397
Strand: Reverse
Name: 187929498
Synonym: Rpic_2419
Alternate gene names: NA
Gene position: 2521397-2519802 (Counterclockwise)
Preceding gene: 187929499
Following gene: 187929497
Centisome position: 63.95
GC content: 62.97
Gene sequence:
>1596_bases ATGGGTAGTCGACGTCATCTTTTTGTTGTCATGGCAACCAGTTGCATAGTTGCAATGCCGTTCATTGGCGGGTGCGGCGG GGCAGACGACCCCGGCTCGTCGGATGTTGCGCAGTGTTCGGGGAGTTCTTGTCCGCCTAGCGGAGCGAACACCACGCCCA GCACGCCAACCAGTCTGTGCCCGGCGGCGCTGGACTACACGACTACGTACACCGGCGGCTCGGGTAGCGGCGAGTACATC AAGGTCAAGTTCGACACGAGCAAGAACACGTACCAGATGCAGTTCCTCGAGTCGTCGGTGCCGACCTCGGCGGGCCAGGT CAATACGACGCGCAAGGGATTGATCATCGACGGTACGTTCGTGCATCCGGCCAACTTACCGACCCGCGAGCAGAACCGCT GCGCTTTCGTGCTGCAGTCGGGCAAGACGGCGGACAACAGCTACGCGATCACCGTCAATCCGCAGGATCCGCCGATGCTG TTTGTCGGTCAGGGCATCGTGGGGGGCGGCATCCCGGGGGCGACCATCCAGTTCGCAGGCATCCAGCCGATTCCGGGCGT CGTGATTGGCGCAGTGCCGTCGCGAACGTTCGATTTCTATCCGTTCCTGGGCTTCTCCGAGACGGTGACGGATTTCTCGC AGGTCGCGGGGCGCTACAACCAGGTCGGCGTGCATGTCACGCCCACGGGTTCGGGCAACCAAACCTCGGCGCCGCAAGGC TGGCAGCCCGATGCCGTCAACTGGACGCAAACGTTAAAAGCGGACGGCTCGTGTACGGCCGAAGGGATCGACTATTCCTG CCACACGACGGGCACGCCCTGGACGCTGCGTCAGAACACCGATGGCTCGCAGGACAACGTGTTTGTCAGCAACCCGACCA GCAGCAACGTGCCGTATCCGTATGTCGGCCAGGTCTCACCGCTGGTGCTGCTGGCGCCGAGCCAGGCCAAGGGCATTCTG ATTGCCGGCAAGCTCAACGGACAGGTCGTGCCGGTGGTGATCCGTGTTGGCTATTCGCACAGCGATCCGACAAACCTGCT GGCTTCGGTGGCGGATGACCAGATCGGCATCTCGATCCTCTCGCCAGCAACGGCGATCCCGGCCAATGCGCTCAAGGGCG GTTTCGTTGGGGCGACCAGCGGCTCGGCTTGCGGCGTGGTCACCAACAATGGCCCGAGTGGTGCGCCCGCCAGCGGCAAC GGCTTGAACGCTACGGTTGATCACCCGGAACTGTCCGGCTCCTTTAGTGGGGGCTTCTTCCACGCCAATGCCGGCAACTG CAGCGACGGGACGGCCGTGTCGACACTCGCCGCCAACTACACATCCACGTTGTTCCAGAACGGCACCGCGGCCTTCATCA ACCCGCTCACATCGCGTGTGACAGCGCAGTTCGGGCTCGACTACACGCAAAGCGCGCCGGGCAAGCTGATCGTGACCGCG CAGAACGACTTCAACGCGCAAGGCGCCAGCGGCAACGTCGCGTTGTTCAAGGCCGGCGACACCGGCGTGGCCGTCAAGGT GGGCAACGTGTACGCGATGCTCATGAACAACAACAAGTACAACCCGTTCTTCACGGTCGGCGCATTTGTCCAGTGA
Upstream 100 bases:
>100_bases CTGTCGGCTGTCGTTTGCCGACAGGCGGGGGTATTGACCGGCCGTTGCACACATTCGCCGGCCCACAACACAACAAGTTC CAAAACATGAGGAGACAACC
Downstream 100 bases:
>100_bases GGCGCGCATCAATGCAAGCACATCCGGTGGCGGCATGCGCAATGTGTGCGCCGCCACCTCTGAACAACAACATGGAGGAG ACGCAAATGCAATGGCGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: Large Exoprotein Involved In Heme Utilization Or Adhesion
Number of amino acids: Translated: 531; Mature: 530
Protein sequence:
>531_residues MGSRRHLFVVMATSCIVAMPFIGGCGGADDPGSSDVAQCSGSSCPPSGANTTPSTPTSLCPAALDYTTTYTGGSGSGEYI KVKFDTSKNTYQMQFLESSVPTSAGQVNTTRKGLIIDGTFVHPANLPTREQNRCAFVLQSGKTADNSYAITVNPQDPPML FVGQGIVGGGIPGATIQFAGIQPIPGVVIGAVPSRTFDFYPFLGFSETVTDFSQVAGRYNQVGVHVTPTGSGNQTSAPQG WQPDAVNWTQTLKADGSCTAEGIDYSCHTTGTPWTLRQNTDGSQDNVFVSNPTSSNVPYPYVGQVSPLVLLAPSQAKGIL IAGKLNGQVVPVVIRVGYSHSDPTNLLASVADDQIGISILSPATAIPANALKGGFVGATSGSACGVVTNNGPSGAPASGN GLNATVDHPELSGSFSGGFFHANAGNCSDGTAVSTLAANYTSTLFQNGTAAFINPLTSRVTAQFGLDYTQSAPGKLIVTA QNDFNAQGASGNVALFKAGDTGVAVKVGNVYAMLMNNNKYNPFFTVGAFVQ
Sequences:
>Translated_531_residues MGSRRHLFVVMATSCIVAMPFIGGCGGADDPGSSDVAQCSGSSCPPSGANTTPSTPTSLCPAALDYTTTYTGGSGSGEYI KVKFDTSKNTYQMQFLESSVPTSAGQVNTTRKGLIIDGTFVHPANLPTREQNRCAFVLQSGKTADNSYAITVNPQDPPML FVGQGIVGGGIPGATIQFAGIQPIPGVVIGAVPSRTFDFYPFLGFSETVTDFSQVAGRYNQVGVHVTPTGSGNQTSAPQG WQPDAVNWTQTLKADGSCTAEGIDYSCHTTGTPWTLRQNTDGSQDNVFVSNPTSSNVPYPYVGQVSPLVLLAPSQAKGIL IAGKLNGQVVPVVIRVGYSHSDPTNLLASVADDQIGISILSPATAIPANALKGGFVGATSGSACGVVTNNGPSGAPASGN GLNATVDHPELSGSFSGGFFHANAGNCSDGTAVSTLAANYTSTLFQNGTAAFINPLTSRVTAQFGLDYTQSAPGKLIVTA QNDFNAQGASGNVALFKAGDTGVAVKVGNVYAMLMNNNKYNPFFTVGAFVQ >Mature_530_residues GSRRHLFVVMATSCIVAMPFIGGCGGADDPGSSDVAQCSGSSCPPSGANTTPSTPTSLCPAALDYTTTYTGGSGSGEYIK VKFDTSKNTYQMQFLESSVPTSAGQVNTTRKGLIIDGTFVHPANLPTREQNRCAFVLQSGKTADNSYAITVNPQDPPMLF VGQGIVGGGIPGATIQFAGIQPIPGVVIGAVPSRTFDFYPFLGFSETVTDFSQVAGRYNQVGVHVTPTGSGNQTSAPQGW QPDAVNWTQTLKADGSCTAEGIDYSCHTTGTPWTLRQNTDGSQDNVFVSNPTSSNVPYPYVGQVSPLVLLAPSQAKGILI AGKLNGQVVPVVIRVGYSHSDPTNLLASVADDQIGISILSPATAIPANALKGGFVGATSGSACGVVTNNGPSGAPASGNG LNATVDHPELSGSFSGGFFHANAGNCSDGTAVSTLAANYTSTLFQNGTAAFINPLTSRVTAQFGLDYTQSAPGKLIVTAQ NDFNAQGASGNVALFKAGDTGVAVKVGNVYAMLMNNNKYNPFFTVGAFVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54500; Mature: 54369
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSRRHLFVVMATSCIVAMPFIGGCGGADDPGSSDVAQCSGSSCPPSGANTTPSTPTSLC CCCCEEEEEEEECHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHC PAALDYTTTYTGGSGSGEYIKVKFDTSKNTYQMQFLESSVPTSAGQVNTTRKGLIIDGTF CHHHCCEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECEE VHPANLPTREQNRCAFVLQSGKTADNSYAITVNPQDPPMLFVGQGIVGGGIPGATIQFAG ECCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCEECCCCCCCEEEEEC IQPIPGVVIGAVPSRTFDFYPFLGFSETVTDFSQVAGRYNQVGVHVTPTGSGNQTSAPQG CCCCCCEEEECCCCCCEECCCCCCCHHHHHHHHHHCCCHHEEEEEEEECCCCCCCCCCCC WQPDAVNWTQTLKADGSCTAEGIDYSCHTTGTPWTLRQNTDGSQDNVFVSNPTSSNVPYP CCCCCCCHHHEEECCCCEEECCCCEEEECCCCCEEEECCCCCCCCCEEEECCCCCCCCCC YVGQVSPLVLLAPSQAKGILIAGKLNGQVVPVVIRVGYSHSDPTNLLASVADDQIGISIL CCCCCCCEEEECCCCCCCEEEEEECCCEEEEEEEEECCCCCCHHHHHHHHCCCCCCEEEE SPATAIPANALKGGFVGATSGSACGVVTNNGPSGAPASGNGLNATVDHPELSGSFSGGFF CCCCCCCHHHHCCCEEECCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCEE HANAGNCSDGTAVSTLAANYTSTLFQNGTAAFINPLTSRVTAQFGLDYTQSAPGKLIVTA ECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCCCEEEEEE QNDFNAQGASGNVALFKAGDTGVAVKVGNVYAMLMNNNKYNPFFTVGAFVQ CCCCCCCCCCCCEEEEEECCCCEEEEECCEEEEEEECCCCCCEEEEEEECC >Mature Secondary Structure GSRRHLFVVMATSCIVAMPFIGGCGGADDPGSSDVAQCSGSSCPPSGANTTPSTPTSLC CCCEEEEEEEECHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHC PAALDYTTTYTGGSGSGEYIKVKFDTSKNTYQMQFLESSVPTSAGQVNTTRKGLIIDGTF CHHHCCEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECEE VHPANLPTREQNRCAFVLQSGKTADNSYAITVNPQDPPMLFVGQGIVGGGIPGATIQFAG ECCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCEECCCCCCCEEEEEC IQPIPGVVIGAVPSRTFDFYPFLGFSETVTDFSQVAGRYNQVGVHVTPTGSGNQTSAPQG CCCCCCEEEECCCCCCEECCCCCCCHHHHHHHHHHCCCHHEEEEEEEECCCCCCCCCCCC WQPDAVNWTQTLKADGSCTAEGIDYSCHTTGTPWTLRQNTDGSQDNVFVSNPTSSNVPYP CCCCCCCHHHEEECCCCEEECCCCEEEECCCCCEEEECCCCCCCCCEEEECCCCCCCCCC YVGQVSPLVLLAPSQAKGILIAGKLNGQVVPVVIRVGYSHSDPTNLLASVADDQIGISIL CCCCCCCEEEECCCCCCCEEEEEECCCEEEEEEEEECCCCCCHHHHHHHHCCCCCCEEEE SPATAIPANALKGGFVGATSGSACGVVTNNGPSGAPASGNGLNATVDHPELSGSFSGGFF CCCCCCCHHHHCCCEEECCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCEE HANAGNCSDGTAVSTLAANYTSTLFQNGTAAFINPLTSRVTAQFGLDYTQSAPGKLIVTA ECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCCCEEEEEE QNDFNAQGASGNVALFKAGDTGVAVKVGNVYAMLMNNNKYNPFFTVGAFVQ CCCCCCCCCCCCEEEEEECCCCEEEEECCEEEEEEECCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA