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The map label for this gene is ybgL [C]

Identifier: 187929451

GI number: 187929451

Start: 2466023

End: 2466766

Strand: Reverse

Name: ybgL [C]

Synonym: Rpic_2372

Alternate gene names: 187929451

Gene position: 2466766-2466023 (Counterclockwise)

Preceding gene: 187929452

Following gene: 187929450

Centisome position: 62.57

GC content: 66.26

Gene sequence:

>744_bases
ATGACCGCAATTGATCTGAATGCCGACCTCGGCGAAGGCTGCGATACCGACGAGGCGCTCCTCGCACTGGTGAGTTCCGC
CAACATCGCCTGCGGCTGGCACGCCGGCGACGTCAACACGATGCGCCAGACCGTGGGCTGGGCGCTGCGCCAGGGCGTGT
CGATTGGCGCGCATCCGAGCTTTCCCGATCGCGAAAACTTTGGCCGCACTGAGATGCATCTGCAGCCCGATGAAATCTAC
GCGGGCGTGCTGTTCCAGATTGGTGGGCTGTCAGCCATCGTGCGTGCGCAGGGCGGCAAGCTGGCGCACGTGAAGGCGCA
CGGCGCGCTGTACAACCAGGCTTCGCGCGACCGGCCGCTGGCCATGGCCATCGTGCACGCGATCCGCGATTTCGATCCGT
CGCTGGTGGTGTTTGGCCTGGCGGGAGGTGAACTGGTCAAGGCCGCGCGTGAACTTGGCCTGCAGGCCAAGGAAGAGGTG
TTTGCCGATCGCGGTTACAACGCAGACGGCTCGCTCGTCAAACGCGGTACGCCGGGCGCCCTGATCGACAGCGAAGATGC
CGCGCTGGACCAGACGCTGACGATGGTGCGCGAGCAGCGCGTGAAGGCCATCGACGGCACGTGGGTTCCGATCCGCGCGG
AAACGGTTTGTCTGCACGGCGACGGCGCGCATGCGCTGGCGTTCGCGCGACGCATTCGGGAACGGCTTGGCAGCGAAGGC
ATCGCTGTTCGCGCCGGCGCCTGA

Upstream 100 bases:

>100_bases
ATCGAAACCGCACTGGATTGGCAGCGCCAAGGCATTCTGTCGAGCGCGCATCGCACCGCCAAGACGCGACTGAACGCCTG
ATGCACCGGAAGACAACACC

Downstream 100 bases:

>100_bases
GCCACGGCCCCGTCCTTCCAGCGGGGCTTTTTATCAACTTGGGGGGAAGCACCACATGGGTACGGCAGTGAATCTATGGC
CGCTGATCGGGGTGGTCGTC

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MTAIDLNADLGEGCDTDEALLALVSSANIACGWHAGDVNTMRQTVGWALRQGVSIGAHPSFPDRENFGRTEMHLQPDEIY
AGVLFQIGGLSAIVRAQGGKLAHVKAHGALYNQASRDRPLAMAIVHAIRDFDPSLVVFGLAGGELVKAARELGLQAKEEV
FADRGYNADGSLVKRGTPGALIDSEDAALDQTLTMVREQRVKAIDGTWVPIRAETVCLHGDGAHALAFARRIRERLGSEG
IAVRAGA

Sequences:

>Translated_247_residues
MTAIDLNADLGEGCDTDEALLALVSSANIACGWHAGDVNTMRQTVGWALRQGVSIGAHPSFPDRENFGRTEMHLQPDEIY
AGVLFQIGGLSAIVRAQGGKLAHVKAHGALYNQASRDRPLAMAIVHAIRDFDPSLVVFGLAGGELVKAARELGLQAKEEV
FADRGYNADGSLVKRGTPGALIDSEDAALDQTLTMVREQRVKAIDGTWVPIRAETVCLHGDGAHALAFARRIRERLGSEG
IAVRAGA
>Mature_246_residues
TAIDLNADLGEGCDTDEALLALVSSANIACGWHAGDVNTMRQTVGWALRQGVSIGAHPSFPDRENFGRTEMHLQPDEIYA
GVLFQIGGLSAIVRAQGGKLAHVKAHGALYNQASRDRPLAMAIVHAIRDFDPSLVVFGLAGGELVKAARELGLQAKEEVF
ADRGYNADGSLVKRGTPGALIDSEDAALDQTLTMVREQRVKAIDGTWVPIRAETVCLHGDGAHALAFARRIRERLGSEGI
AVRAGA

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family

Homologues:

Organism=Escherichia coli, GI1786931, Length=242, Percent_Identity=60.7438016528926, Blast_Score=305, Evalue=2e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2372_RALPJ (B2U8X6)

Other databases:

- EMBL:   CP001068
- RefSeq:   YP_001899938.1
- ProteinModelPortal:   B2U8X6
- SMR:   B2U8X6
- GeneID:   6286328
- GenomeReviews:   CP001068_GR
- KEGG:   rpi:Rpic_2372
- HOGENOM:   HBG482818
- OMA:   QTICLHG
- ProtClustDB:   PRK05406
- HAMAP:   MF_00691
- InterPro:   IPR011330
- InterPro:   IPR005501

Pfam domain/function: PF03746 LamB_YcsF; SSF88713 Glyco_hydro/deAcase_b/a-brl

EC number: NA

Molecular weight: Translated: 26258; Mature: 26127

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAIDLNADLGEGCDTDEALLALVSSANIACGWHAGDVNTMRQTVGWALRQGVSIGAHPS
CCEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCC
FPDRENFGRTEMHLQPDEIYAGVLFQIGGLSAIVRAQGGKLAHVKAHGALYNQASRDRPL
CCCCCCCCCCEEEECHHHHHHHHHHHHCCHHEEEECCCCCEEEEEECCHHHHHCCCCCCH
AMAIVHAIRDFDPSLVVFGLAGGELVKAARELGLQAKEEVFADRGYNADGSLVKRGTPGA
HHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEECCCCCC
LIDSEDAALDQTLTMVREQRVKAIDGTWVPIRAETVCLHGDGAHALAFARRIRERLGSEG
EECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCC
IAVRAGA
EEEEECC
>Mature Secondary Structure 
TAIDLNADLGEGCDTDEALLALVSSANIACGWHAGDVNTMRQTVGWALRQGVSIGAHPS
CEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCC
FPDRENFGRTEMHLQPDEIYAGVLFQIGGLSAIVRAQGGKLAHVKAHGALYNQASRDRPL
CCCCCCCCCCEEEECHHHHHHHHHHHHCCHHEEEECCCCCEEEEEECCHHHHHCCCCCCH
AMAIVHAIRDFDPSLVVFGLAGGELVKAARELGLQAKEEVFADRGYNADGSLVKRGTPGA
HHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEECCCCCC
LIDSEDAALDQTLTMVREQRVKAIDGTWVPIRAETVCLHGDGAHALAFARRIRERLGSEG
EECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCC
IAVRAGA
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA