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The map label for this gene is ybgK [H]

Identifier: 187929452

GI number: 187929452

Start: 2466786

End: 2467835

Strand: Reverse

Name: ybgK [H]

Synonym: Rpic_2373

Alternate gene names: 187929452

Gene position: 2467835-2466786 (Counterclockwise)

Preceding gene: 187929453

Following gene: 187929451

Centisome position: 62.59

GC content: 66.86

Gene sequence:

>1050_bases
ATGAGTTCGAAACCCCAACCCATGATCGAGATCGTGCGGGCCGGCGTGCTGGCGTCCGTGCAGGACCTGGGCCGCACCGG
CTATCGCCGTTTTGGCGTGTGCACGTCGGGCGCGCTGGATCCGCTGTCGCTGTATGTGGGCAACCGCTTGGTTGGCAACC
GCAGCGATGCGGCGGGCATCGAGTTCACGCTGGGCAACGCCACGCTGCGCTTCCACGCCAATGGCCTGATCGCGCTGACG
GGCGCCGATTGCCGCGCCACGCTCGACGGCGCACCGGTGCATGCTTGGCGCGCCATCCCCGTGCAACGCGGGCAGATGCT
GACATTGCGCGTGGCGCAGGGCGGGGTGCGTGCGTATCTCTGCGTGGCCGGCGGCATCGATGTGCCCGAGATGATGGGCT
CGCGCAGCACCGATCTGAAAGCCGGCTTTGGTGGTTTCGAAGGGCGCCCGTTGAAAGACGGCGACAGGCTGCCCGTGCTG
CCTGCCGACACAACGTACGCCCCCGACATCAGCGGCGATACCGTTGCCGTGAAGGCCGCCCGCTGGACGTTCGACCGCGC
GCAGAAGGACACGCCGGTCATGCGCGTGCTGCCCGGTCCTGAATACGACGATTTCGTTGCCGACGCGCAAGCCGCATTCT
GGGAATCGGACTGGACGCTCACCCCCAACAGCAACCGGATGGGTTTTCGCCTGCAGGGGCCGGAACTCAAGCGCAAAAAG
CAGCGCAGCGGCGATCTGCTCTCGCACGGCGTGGTGCCGGGCGTGATCCAGGTGCCGCCGTCTGGCCAGCCCATTGTGTT
GATGGCCGATGCGCAAACCACGGGCGGCTATCCGAAGATCGGCTCCGTCATCCTGGCCGACCAATGGCGCCTGGCGCAGA
TTCCGCTCGGCACGCGCGTGCGCTTCGAGCGTGTCACGCTGGAAGAGGCCGAAGCCGCCCGCGCCGACGTGGCACGGTAT
CTGCAGCAAATCGAAACCGCACTGGATTGGCAGCGCCAAGGCATTCTGTCGAGCGCGCATCGCACCGCCAAGACGCGACT
GAACGCCTGA

Upstream 100 bases:

>100_bases
TTGGCCGCACAGACGCGGCGCTCTTCATGCCGCAGCGTAATCCCCCCACGCTGCTGGCGCCCGGAGACCGCATCCGCTTT
GTTGCCTCGAAGGTGCGCGC

Downstream 100 bases:

>100_bases
TGCACCGGAAGACAACACCATGACCGCAATTGATCTGAATGCCGACCTCGGCGAAGGCTGCGATACCGACGAGGCGCTCC
TCGCACTGGTGAGTTCCGCC

Product: urea amidolyase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MSSKPQPMIEIVRAGVLASVQDLGRTGYRRFGVCTSGALDPLSLYVGNRLVGNRSDAAGIEFTLGNATLRFHANGLIALT
GADCRATLDGAPVHAWRAIPVQRGQMLTLRVAQGGVRAYLCVAGGIDVPEMMGSRSTDLKAGFGGFEGRPLKDGDRLPVL
PADTTYAPDISGDTVAVKAARWTFDRAQKDTPVMRVLPGPEYDDFVADAQAAFWESDWTLTPNSNRMGFRLQGPELKRKK
QRSGDLLSHGVVPGVIQVPPSGQPIVLMADAQTTGGYPKIGSVILADQWRLAQIPLGTRVRFERVTLEEAEAARADVARY
LQQIETALDWQRQGILSSAHRTAKTRLNA

Sequences:

>Translated_349_residues
MSSKPQPMIEIVRAGVLASVQDLGRTGYRRFGVCTSGALDPLSLYVGNRLVGNRSDAAGIEFTLGNATLRFHANGLIALT
GADCRATLDGAPVHAWRAIPVQRGQMLTLRVAQGGVRAYLCVAGGIDVPEMMGSRSTDLKAGFGGFEGRPLKDGDRLPVL
PADTTYAPDISGDTVAVKAARWTFDRAQKDTPVMRVLPGPEYDDFVADAQAAFWESDWTLTPNSNRMGFRLQGPELKRKK
QRSGDLLSHGVVPGVIQVPPSGQPIVLMADAQTTGGYPKIGSVILADQWRLAQIPLGTRVRFERVTLEEAEAARADVARY
LQQIETALDWQRQGILSSAHRTAKTRLNA
>Mature_348_residues
SSKPQPMIEIVRAGVLASVQDLGRTGYRRFGVCTSGALDPLSLYVGNRLVGNRSDAAGIEFTLGNATLRFHANGLIALTG
ADCRATLDGAPVHAWRAIPVQRGQMLTLRVAQGGVRAYLCVAGGIDVPEMMGSRSTDLKAGFGGFEGRPLKDGDRLPVLP
ADTTYAPDISGDTVAVKAARWTFDRAQKDTPVMRVLPGPEYDDFVADAQAAFWESDWTLTPNSNRMGFRLQGPELKRKKQ
RSGDLLSHGVVPGVIQVPPSGQPIVLMADAQTTGGYPKIGSVILADQWRLAQIPLGTRVRFERVTLEEAEAARADVARYL
QQIETALDWQRQGILSSAHRTAKTRLNA

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=317, Percent_Identity=51.7350157728707, Blast_Score=300, Evalue=6e-83,
Organism=Saccharomyces cerevisiae, GI6319685, Length=335, Percent_Identity=31.6417910447761, Blast_Score=142, Evalue=6e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 37719; Mature: 37587

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSKPQPMIEIVRAGVLASVQDLGRTGYRRFGVCTSGALDPLSLYVGNRLVGNRSDAAGI
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHCCEEECCCCCCCCE
EFTLGNATLRFHANGLIALTGADCRATLDGAPVHAWRAIPVQRGQMLTLRVAQGGVRAYL
EEEECCEEEEEECCCEEEEECCCCEEECCCCCEEEEEECCCCCCCEEEEEEECCCCEEEE
CVAGGIDVPEMMGSRSTDLKAGFGGFEGRPLKDGDRLPVLPADTTYAPDISGDTVAVKAA
EEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEE
RWTFDRAQKDTPVMRVLPGPEYDDFVADAQAAFWESDWTLTPNSNRMGFRLQGPELKRKK
EEEHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEECCCCCCEEEEECCCHHHHHH
QRSGDLLSHGVVPGVIQVPPSGQPIVLMADAQTTGGYPKIGSVILADQWRLAQIPLGTRV
HHCCCHHHCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCEEEECCEEEEECCCCCCE
RFERVTLEEAEAARADVARYLQQIETALDWQRQGILSSAHRTAKTRLNA
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSKPQPMIEIVRAGVLASVQDLGRTGYRRFGVCTSGALDPLSLYVGNRLVGNRSDAAGI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHCCEEECCCCCCCCE
EFTLGNATLRFHANGLIALTGADCRATLDGAPVHAWRAIPVQRGQMLTLRVAQGGVRAYL
EEEECCEEEEEECCCEEEEECCCCEEECCCCCEEEEEECCCCCCCEEEEEEECCCCEEEE
CVAGGIDVPEMMGSRSTDLKAGFGGFEGRPLKDGDRLPVLPADTTYAPDISGDTVAVKAA
EEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEE
RWTFDRAQKDTPVMRVLPGPEYDDFVADAQAAFWESDWTLTPNSNRMGFRLQGPELKRKK
EEEHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEECCCCCCEEEEECCCHHHHHH
QRSGDLLSHGVVPGVIQVPPSGQPIVLMADAQTTGGYPKIGSVILADQWRLAQIPLGTRV
HHCCCHHHCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCEEEECCEEEEECCCCCCE
RFERVTLEEAEAARADVARYLQQIETALDWQRQGILSSAHRTAKTRLNA
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]