| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187929368
Identifier: 187929368
GI number: 187929368
Start: 2411224
End: 2412612
Strand: Reverse
Name: 187929368
Synonym: Rpic_2289
Alternate gene names: NA
Gene position: 2412612-2411224 (Counterclockwise)
Preceding gene: 187929369
Following gene: 187929367
Centisome position: 61.19
GC content: 58.39
Gene sequence:
>1389_bases ATGCCACTTGATCCCTCGATTCCGCTCAAGCTAGCGACGCCGGAAAATAACCCTCTGCAGACAGCGATGCAGGCTGCTCA GTTCAAGTACATGAACCTGAACAGCAACCAACTGCAGCAATCGATGAACGCGAACCAGGCCGTCTCTCAAGCAATCCAGC GCAACACTGGAGCAGACGGTTCTGTGAATCTCAGTGGTGTTCAGTCAGACCTCGCGCAAGATCCGCGCGCAGCCTACAAC CTTCAAGCTGCGACTGGCACGAATCTGCAGCAGCAGGGTTCGCAGATCCAGAATGACACTACGTCGCTAGACCTTAAAAA GCAGCGCCTTGGGATGATCACTCAGCAGATGGGCACGCTGCTGAACAAGCCCGACCTCAACCGTGATGACTTGATCAATG CCGCCACGTCGATGGGCAAGAACTTCGGCCTGCCGCAGAATGTCATCGATCAGTTCGAATCAGGGATTCCGACCGATCAG TCTCAACTCAAGCCGTTCTTGGCCTCCAAGATCGCGACTATCCAAGACGCCGGCGCGCAACTGGAATCCATGACCCCTGG CGGTGGTTCAGTTGATACCGGCCCTAACGTGGCGATCACCAATACCCGTTTGGCCAGCGGCGCACCGATCGGTAGCCCGG TGGCCGTCTACAACAAGGGGTTGACGCCGGAAGGCGCCTCGACACCCACTCAGGTCGGCATTAACCAGCAGGGCGCGCCG CTGTACGGAACGCGCGGTCAGTTCGTCGATCAGGCAAATAAGACGGGGGGCGTGCAAACCGGTCTTTCGCCTTACAACCA GGCCTCTCAGCAGACTGCAGCGCAGTACGAGCAGGGGCTGAATACGCGCGTCACGGCGGCCCAGAACTCCTCGCACTACC TCAGCGAGGCCCAGGATCTGCTCGATAGCGTGCGTACGGGTGGGGGAGGCGTTGCCCGTGCGGATCTCGCCCGACGTGCT CAGGCGATTCCAGGCATGCCGCAATCGGTGGTGGATGCGATCGCGGGCGGCAATCTTGGAAATACGCAGGTCCTGCAGAA AGTACTGCTGCAGAATGCCATCCAGCAGATGCAGGCTAACTTTAATGGTACCGGTGCTGTCGCCAACGTCGAACAGTTCC TGAAGAACAACCCGAACCTGGAAAACGATCCGCGCGCTATTCCGAAGCTGTTCGACTTCATCGGCGGCATGAACACCAAC CTTGGACGCGAGCAGCAGGCCTATCGGGACTTCGTGAATAAGGGCAACAACCCTGCAGACTTCAACGCCGCATGGAACGC CAGCCCGACGATGCGGGCCTTTACGGGCCAGATCAAACCGGTCAAAACCGGCACCTATAACGGCCGTAAGGTCGTGCAGT ACTCTGACGGTTCTGTCGACTACCAATGA
Upstream 100 bases:
>100_bases CGCAGAACAACGCCACTCAGTCAGGTTCTTGGGGTACCCGATTCAATCCCAATGACACGAGCACCTACTTCAACGATCCC GCTGCCTACGGTTGAATGTC
Downstream 100 bases:
>100_bases GCGACATCAAGAAGTTCATCCAGGACAACCTGGCAGCAGCTCAGGCTGTATCAGACAAGATCGGCGTTGATCCGTCCGTC ATTCTTGGCCAGTGGGGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 462; Mature: 461
Protein sequence:
>462_residues MPLDPSIPLKLATPENNPLQTAMQAAQFKYMNLNSNQLQQSMNANQAVSQAIQRNTGADGSVNLSGVQSDLAQDPRAAYN LQAATGTNLQQQGSQIQNDTTSLDLKKQRLGMITQQMGTLLNKPDLNRDDLINAATSMGKNFGLPQNVIDQFESGIPTDQ SQLKPFLASKIATIQDAGAQLESMTPGGGSVDTGPNVAITNTRLASGAPIGSPVAVYNKGLTPEGASTPTQVGINQQGAP LYGTRGQFVDQANKTGGVQTGLSPYNQASQQTAAQYEQGLNTRVTAAQNSSHYLSEAQDLLDSVRTGGGGVARADLARRA QAIPGMPQSVVDAIAGGNLGNTQVLQKVLLQNAIQQMQANFNGTGAVANVEQFLKNNPNLENDPRAIPKLFDFIGGMNTN LGREQQAYRDFVNKGNNPADFNAAWNASPTMRAFTGQIKPVKTGTYNGRKVVQYSDGSVDYQ
Sequences:
>Translated_462_residues MPLDPSIPLKLATPENNPLQTAMQAAQFKYMNLNSNQLQQSMNANQAVSQAIQRNTGADGSVNLSGVQSDLAQDPRAAYN LQAATGTNLQQQGSQIQNDTTSLDLKKQRLGMITQQMGTLLNKPDLNRDDLINAATSMGKNFGLPQNVIDQFESGIPTDQ SQLKPFLASKIATIQDAGAQLESMTPGGGSVDTGPNVAITNTRLASGAPIGSPVAVYNKGLTPEGASTPTQVGINQQGAP LYGTRGQFVDQANKTGGVQTGLSPYNQASQQTAAQYEQGLNTRVTAAQNSSHYLSEAQDLLDSVRTGGGGVARADLARRA QAIPGMPQSVVDAIAGGNLGNTQVLQKVLLQNAIQQMQANFNGTGAVANVEQFLKNNPNLENDPRAIPKLFDFIGGMNTN LGREQQAYRDFVNKGNNPADFNAAWNASPTMRAFTGQIKPVKTGTYNGRKVVQYSDGSVDYQ >Mature_461_residues PLDPSIPLKLATPENNPLQTAMQAAQFKYMNLNSNQLQQSMNANQAVSQAIQRNTGADGSVNLSGVQSDLAQDPRAAYNL QAATGTNLQQQGSQIQNDTTSLDLKKQRLGMITQQMGTLLNKPDLNRDDLINAATSMGKNFGLPQNVIDQFESGIPTDQS QLKPFLASKIATIQDAGAQLESMTPGGGSVDTGPNVAITNTRLASGAPIGSPVAVYNKGLTPEGASTPTQVGINQQGAPL YGTRGQFVDQANKTGGVQTGLSPYNQASQQTAAQYEQGLNTRVTAAQNSSHYLSEAQDLLDSVRTGGGGVARADLARRAQ AIPGMPQSVVDAIAGGNLGNTQVLQKVLLQNAIQQMQANFNGTGAVANVEQFLKNNPNLENDPRAIPKLFDFIGGMNTNL GREQQAYRDFVNKGNNPADFNAAWNASPTMRAFTGQIKPVKTGTYNGRKVVQYSDGSVDYQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49013; Mature: 48882
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLDPSIPLKLATPENNPLQTAMQAAQFKYMNLNSNQLQQSMNANQAVSQAIQRNTGADG CCCCCCCCEEEECCCCCHHHHHHHHHHHHEECCCHHHHHHHHCHHHHHHHHHHHCCCCCC SVNLSGVQSDLAQDPRAAYNLQAATGTNLQQQGSQIQNDTTSLDLKKQRLGMITQQMGTL CEEHHHHHHHHHCCCHHHEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LNKPDLNRDDLINAATSMGKNFGLPQNVIDQFESGIPTDQSQLKPFLASKIATIQDAGAQ HCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCH LESMTPGGGSVDTGPNVAITNTRLASGAPIGSPVAVYNKGLTPEGASTPTQVGINQQGAP HHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC LYGTRGQFVDQANKTGGVQTGLSPYNQASQQTAAQYEQGLNTRVTAAQNSSHYLSEAQDL CCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH LDSVRTGGGGVARADLARRAQAIPGMPQSVVDAIAGGNLGNTQVLQKVLLQNAIQQMQAN HHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC FNGTGAVANVEQFLKNNPNLENDPRAIPKLFDFIGGMNTNLGREQQAYRDFVNKGNNPAD CCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCC FNAAWNASPTMRAFTGQIKPVKTGTYNGRKVVQYSDGSVDYQ CCCCCCCCCCHHHHCCCCCEEECCCCCCCEEEEECCCCCCCC >Mature Secondary Structure PLDPSIPLKLATPENNPLQTAMQAAQFKYMNLNSNQLQQSMNANQAVSQAIQRNTGADG CCCCCCCEEEECCCCCHHHHHHHHHHHHEECCCHHHHHHHHCHHHHHHHHHHHCCCCCC SVNLSGVQSDLAQDPRAAYNLQAATGTNLQQQGSQIQNDTTSLDLKKQRLGMITQQMGTL CEEHHHHHHHHHCCCHHHEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LNKPDLNRDDLINAATSMGKNFGLPQNVIDQFESGIPTDQSQLKPFLASKIATIQDAGAQ HCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCH LESMTPGGGSVDTGPNVAITNTRLASGAPIGSPVAVYNKGLTPEGASTPTQVGINQQGAP HHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC LYGTRGQFVDQANKTGGVQTGLSPYNQASQQTAAQYEQGLNTRVTAAQNSSHYLSEAQDL CCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH LDSVRTGGGGVARADLARRAQAIPGMPQSVVDAIAGGNLGNTQVLQKVLLQNAIQQMQAN HHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC FNGTGAVANVEQFLKNNPNLENDPRAIPKLFDFIGGMNTNLGREQQAYRDFVNKGNNPAD CCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCC FNAAWNASPTMRAFTGQIKPVKTGTYNGRKVVQYSDGSVDYQ CCCCCCCCCCHHHHCCCCCEEECCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA