Definition Ralstonia pickettii 12J chromosome chromosome 1, complete sequence.
Accession NC_010682
Length 3,942,557

Click here to switch to the map view.

The map label for this gene is 187929363

Identifier: 187929363

GI number: 187929363

Start: 2404801

End: 2405391

Strand: Reverse

Name: 187929363

Synonym: Rpic_2284

Alternate gene names: NA

Gene position: 2405391-2404801 (Counterclockwise)

Preceding gene: 187929364

Following gene: 187929356

Centisome position: 61.01

GC content: 59.56

Gene sequence:

>591_bases
ATGCTTCCAATCGCTCTCGCACTGGCGCAGTTCGCGCCGATGATCGCCGGCTGGCTTGGCGGCCAGAAGGCCGAAGAAGT
TGCTGGCAAAGTGGTCGGCATTGCCCAACAGGTAACAGGACAGTCGTCACCCGACGCCACGGTGGCCGCACTGGCGGCAG
ATCCGAATCTAGCGTTTCAGTTCCAAAAGGCGGTGCTAGATCAGCAGGCGCATCTGGCAGAGATCGCCGCTGACGTGACC
AAGGCAGAACTGGCCACCGACACGGCACAGGTGCAAGCGGTCAATACCACGATGCAGGCTGAGGTTGCCAATTCTGCCAA
TGAATCGTGGTATCAGAAGGGCTGGCGCCCGTTCAACGGCTTTGTGGTAGGGCTCGGGTCATTCGTGGCAGTGTGCTTTG
TCTGCTATCTGTTCTACGTCGCCATCATCCAAAAGGATCTGGCGGCACTCAACATGGTGCCGCAACTCGCCACAGCCATT
GCCATGATCCTAGCGGTGCCCGGTGCAGCGGTGGGTATCACTGCATGGCACCGCGGTGTACTTCAGCGCATGCAGATCCA
GGGGGACGGGAAAAGCGGGACAACGCAATGA

Upstream 100 bases:

>100_bases
CGATCCGCCTGCGTTACTTCACGGCCATCAAGACGTGGCTCACCTTCGGGCGAGGCTGGGCAATCCGCATCGCCAACAAC
CTTTGGAAAGGAGCTGCGTG

Downstream 100 bases:

>100_bases
ATGCCATCGCCTTCCTTAAGCGCTATTTGTGGAACTGGCTACGATGGGGAGATGAGGGACTCAACGTGTTCTGGGGTGGC
GATGCAAACGAGATGTTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MLPIALALAQFAPMIAGWLGGQKAEEVAGKVVGIAQQVTGQSSPDATVAALAADPNLAFQFQKAVLDQQAHLAEIAADVT
KAELATDTAQVQAVNTTMQAEVANSANESWYQKGWRPFNGFVVGLGSFVAVCFVCYLFYVAIIQKDLAALNMVPQLATAI
AMILAVPGAAVGITAWHRGVLQRMQIQGDGKSGTTQ

Sequences:

>Translated_196_residues
MLPIALALAQFAPMIAGWLGGQKAEEVAGKVVGIAQQVTGQSSPDATVAALAADPNLAFQFQKAVLDQQAHLAEIAADVT
KAELATDTAQVQAVNTTMQAEVANSANESWYQKGWRPFNGFVVGLGSFVAVCFVCYLFYVAIIQKDLAALNMVPQLATAI
AMILAVPGAAVGITAWHRGVLQRMQIQGDGKSGTTQ
>Mature_196_residues
MLPIALALAQFAPMIAGWLGGQKAEEVAGKVVGIAQQVTGQSSPDATVAALAADPNLAFQFQKAVLDQQAHLAEIAADVT
KAELATDTAQVQAVNTTMQAEVANSANESWYQKGWRPFNGFVVGLGSFVAVCFVCYLFYVAIIQKDLAALNMVPQLATAI
AMILAVPGAAVGITAWHRGVLQRMQIQGDGKSGTTQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20545; Mature: 20545

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPIALALAQFAPMIAGWLGGQKAEEVAGKVVGIAQQVTGQSSPDATVAALAADPNLAFQ
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHH
FQKAVLDQQAHLAEIAADVTKAELATDTAQVQAVNTTMQAEVANSANESWYQKGWRPFNG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCH
FVVGLGSFVAVCFVCYLFYVAIIQKDLAALNMVPQLATAIAMILAVPGAAVGITAWHRGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LQRMQIQGDGKSGTTQ
HHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLPIALALAQFAPMIAGWLGGQKAEEVAGKVVGIAQQVTGQSSPDATVAALAADPNLAFQ
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHH
FQKAVLDQQAHLAEIAADVTKAELATDTAQVQAVNTTMQAEVANSANESWYQKGWRPFNG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCH
FVVGLGSFVAVCFVCYLFYVAIIQKDLAALNMVPQLATAIAMILAVPGAAVGITAWHRGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LQRMQIQGDGKSGTTQ
HHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA