| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187929364
Identifier: 187929364
GI number: 187929364
Start: 2405391
End: 2405873
Strand: Reverse
Name: 187929364
Synonym: Rpic_2285
Alternate gene names: NA
Gene position: 2405873-2405391 (Counterclockwise)
Preceding gene: 187929365
Following gene: 187929363
Centisome position: 61.02
GC content: 58.39
Gene sequence:
>483_bases GTGAGTAGCTTTGATGATGCTTTTGACGCCCTAATTGGGAATGAGGGCGGCTACAGCAACAACCCGGCTGACCCGGGAGG GGAAACAATGTGGGGCATCACCGCCCGCGTAGCCCGCGCAAGTGGCTATACCGGCCCGATGCGAGAACTGCCCCAAGTAA CGGCAAAAGCCATTGCCAAGAAGCTCTATTGGGATCCGTTGCATCTCGATGAATTAGATCCGCGTGTGGCGTTTCAGATC TTCGATGCCAACTACAACGGTGGTCATCCGGTGATCTGGATGCAAGGCGCGTCCGGCGCCAAGGTCGACGGTCTGCTCGG ACCGCAGACAATCGCCGCAGTGCAAGCGACCGATCCCCTACGTTTCATGATGCGCTGGAACTCGATCCGCCTGCGTTACT TCACGGCCATCAAGACGTGGCTCACCTTCGGGCGAGGCTGGGCAATCCGCATCGCCAACAACCTTTGGAAAGGAGCTGCG TGA
Upstream 100 bases:
>100_bases TCAAACCATGAACTCGTTTGGTTTGTTGCCGCCCTGAACATAGCCTGGATTTGCTCTCAACTTTGGTGGGGATGGGGAAA GTATCTTCGGGAGAAGAAAG
Downstream 100 bases:
>100_bases TGCTTCCAATCGCTCTCGCACTGGCGCAGTTCGCGCCGATGATCGCCGGCTGGCTTGGCGGCCAGAAGGCCGAAGAAGTT GCTGGCAAAGTGGTCGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MSSFDDAFDALIGNEGGYSNNPADPGGETMWGITARVARASGYTGPMRELPQVTAKAIAKKLYWDPLHLDELDPRVAFQI FDANYNGGHPVIWMQGASGAKVDGLLGPQTIAAVQATDPLRFMMRWNSIRLRYFTAIKTWLTFGRGWAIRIANNLWKGAA
Sequences:
>Translated_160_residues MSSFDDAFDALIGNEGGYSNNPADPGGETMWGITARVARASGYTGPMRELPQVTAKAIAKKLYWDPLHLDELDPRVAFQI FDANYNGGHPVIWMQGASGAKVDGLLGPQTIAAVQATDPLRFMMRWNSIRLRYFTAIKTWLTFGRGWAIRIANNLWKGAA >Mature_159_residues SSFDDAFDALIGNEGGYSNNPADPGGETMWGITARVARASGYTGPMRELPQVTAKAIAKKLYWDPLHLDELDPRVAFQIF DANYNGGHPVIWMQGASGAKVDGLLGPQTIAAVQATDPLRFMMRWNSIRLRYFTAIKTWLTFGRGWAIRIANNLWKGAA
Specific function: Unknown
COG id: COG3926
COG function: function code R; Putative secretion activating protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17634; Mature: 17503
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSFDDAFDALIGNEGGYSNNPADPGGETMWGITARVARASGYTGPMRELPQVTAKAIAK CCCHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH KLYWDPLHLDELDPRVAFQIFDANYNGGHPVIWMQGASGAKVDGLLGPQTIAAVQATDPL HHCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCHH RFMMRWNSIRLRYFTAIKTWLTFGRGWAIRIANNLWKGAA HHHHHHCCEEHHHHHHHHHHHHHCCCEEEEEECCCCCCCC >Mature Secondary Structure SSFDDAFDALIGNEGGYSNNPADPGGETMWGITARVARASGYTGPMRELPQVTAKAIAK CCHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH KLYWDPLHLDELDPRVAFQIFDANYNGGHPVIWMQGASGAKVDGLLGPQTIAAVQATDPL HHCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCHH RFMMRWNSIRLRYFTAIKTWLTFGRGWAIRIANNLWKGAA HHHHHHCCEEHHHHHHHHHHHHHCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA