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The map label for this gene is yicC [C]

Identifier: 187929356

GI number: 187929356

Start: 2397138

End: 2398073

Strand: Reverse

Name: yicC [C]

Synonym: Rpic_2277

Alternate gene names: 187929356

Gene position: 2398073-2397138 (Counterclockwise)

Preceding gene: 187929363

Following gene: 187929355

Centisome position: 60.83

GC content: 65.38

Gene sequence:

>936_bases
ATGATCCACAGCATGACCGGCTACGGCGTTGCCACACGCCAGGCAGCCTTTACCGATGCCCATGGCGCACCCAGCGGGAG
CGTCGCCACCGTCTCGGTCGAGTTCCGCACCGTGAACTCGCGCTTCCTCGATCTGCTGTTCCGCGCGCCGGAAGAGTGCC
GTGCCTTCGAGCCGGCCCTGCGCGAAATGCTGATGGGCGCACTGTCGCGCGGCAAGCTGGAGTGCCGGATCAACCTGCAG
CGCCAGGAAGCCGCCAGCGATGTCGCAGCGCTCAATGTGGAACTGCTGCAACAACTGGCCAAGCTTGAGCAGGCGGTCAC
GCCCCACCTGCCGGCATCGGGTTCGCTGCGCATGGGTGAAATCCTACGCTGGCCCGGCGTGCTGGCCGAGCCCCAACTGA
CACAGGACGCGTTGCGCGACGCCGTGATCGAGGCCGCCAAAGAGGCGCTCAAGCAACTTCTGGAATCGCGCCGTCGCGAA
GGCGATGCGCTCAAGGCCGTGCTGCTCGACCGTGCTGACGCAATGCTCGCCATCGTCGACAAGCTCACGCCGATGGTGCC
GGTCCTGATCCAGCAGCATCAGGACAAGCTGACCGAACGCCTGCGCGAGGCGTTTGGCCTGGCCGCGCCCGAAGGCACGC
CGGCACTGACGCGCGACGAGCTGTCGGAGCGCATCCGCCAGGAAGCTACCGTCTACGGCATCCGCATCGACATCGCCGAA
GAACTTTCGCGCCTCCAGGCGCACCTGCGCGAGACGCGCCACATCCTGGAGAAGGGCGGCCAGATCGGCAAGCGCCTCGA
TTTCATGATGCAGGAGTTGAACCGCGAGGCGAATACGCTCGGCTCGAAGGCCGCCGCCAAGGAACTGGCCGATGCATCGA
TGGAACTCAAGCTGCTCATCGAGCAGATGCGCGAGCAGGTCCAGAACCTCGAATAA

Upstream 100 bases:

>100_bases
TGTAAAGCGACAAAAGGTGGGGGATTCCCCGCCAATTCCGGGCGTTAAATAACCGCCGCCGGATTTTCCGACTCGATCAA
GAACAACACACCACGATTCC

Downstream 100 bases:

>100_bases
CTTGAAACGATAGAACCAGAACATGCCATCCTCTCAAGCGCACTCTGCCGTTGATACGCCCATCGAGAATCATTTTCCCG
GCAGCCTGTTCATGGTCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MIHSMTGYGVATRQAAFTDAHGAPSGSVATVSVEFRTVNSRFLDLLFRAPEECRAFEPALREMLMGALSRGKLECRINLQ
RQEAASDVAALNVELLQQLAKLEQAVTPHLPASGSLRMGEILRWPGVLAEPQLTQDALRDAVIEAAKEALKQLLESRRRE
GDALKAVLLDRADAMLAIVDKLTPMVPVLIQQHQDKLTERLREAFGLAAPEGTPALTRDELSERIRQEATVYGIRIDIAE
ELSRLQAHLRETRHILEKGGQIGKRLDFMMQELNREANTLGSKAAAKELADASMELKLLIEQMREQVQNLE

Sequences:

>Translated_311_residues
MIHSMTGYGVATRQAAFTDAHGAPSGSVATVSVEFRTVNSRFLDLLFRAPEECRAFEPALREMLMGALSRGKLECRINLQ
RQEAASDVAALNVELLQQLAKLEQAVTPHLPASGSLRMGEILRWPGVLAEPQLTQDALRDAVIEAAKEALKQLLESRRRE
GDALKAVLLDRADAMLAIVDKLTPMVPVLIQQHQDKLTERLREAFGLAAPEGTPALTRDELSERIRQEATVYGIRIDIAE
ELSRLQAHLRETRHILEKGGQIGKRLDFMMQELNREANTLGSKAAAKELADASMELKLLIEQMREQVQNLE
>Mature_311_residues
MIHSMTGYGVATRQAAFTDAHGAPSGSVATVSVEFRTVNSRFLDLLFRAPEECRAFEPALREMLMGALSRGKLECRINLQ
RQEAASDVAALNVELLQQLAKLEQAVTPHLPASGSLRMGEILRWPGVLAEPQLTQDALRDAVIEAAKEALKQLLESRRRE
GDALKAVLLDRADAMLAIVDKLTPMVPVLIQQHQDKLTERLREAFGLAAPEGTPALTRDELSERIRQEATVYGIRIDIAE
ELSRLQAHLRETRHILEKGGQIGKRLDFMMQELNREANTLGSKAAAKELADASMELKLLIEQMREQVQNLE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=311, Percent_Identity=37.620578778135, Blast_Score=189, Evalue=3e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 34543; Mature: 34543

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHSMTGYGVATRQAAFTDAHGAPSGSVATVSVEFRTVNSRFLDLLFRAPEECRAFEPAL
CCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHCCHHHHHHHHHH
REMLMGALSRGKLECRINLQRQEAASDVAALNVELLQQLAKLEQAVTPHLPASGSLRMGE
HHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
ILRWPGVLAEPQLTQDALRDAVIEAAKEALKQLLESRRREGDALKAVLLDRADAMLAIVD
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
KLTPMVPVLIQQHQDKLTERLREAFGLAAPEGTPALTRDELSERIRQEATVYGIRIDIAE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEHHH
ELSRLQAHLRETRHILEKGGQIGKRLDFMMQELNREANTLGSKAAAKELADASMELKLLI
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQMREQVQNLE
HHHHHHHHCCC
>Mature Secondary Structure
MIHSMTGYGVATRQAAFTDAHGAPSGSVATVSVEFRTVNSRFLDLLFRAPEECRAFEPAL
CCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHCCHHHHHHHHHH
REMLMGALSRGKLECRINLQRQEAASDVAALNVELLQQLAKLEQAVTPHLPASGSLRMGE
HHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
ILRWPGVLAEPQLTQDALRDAVIEAAKEALKQLLESRRREGDALKAVLLDRADAMLAIVD
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
KLTPMVPVLIQQHQDKLTERLREAFGLAAPEGTPALTRDELSERIRQEATVYGIRIDIAE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEHHH
ELSRLQAHLRETRHILEKGGQIGKRLDFMMQELNREANTLGSKAAAKELADASMELKLLI
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQMREQVQNLE
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]