| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is livK [C]
Identifier: 187929300
GI number: 187929300
Start: 2331269
End: 2332528
Strand: Reverse
Name: livK [C]
Synonym: Rpic_2221
Alternate gene names: 187929300
Gene position: 2332528-2331269 (Counterclockwise)
Preceding gene: 187929302
Following gene: 187929299
Centisome position: 59.16
GC content: 63.17
Gene sequence:
>1260_bases ATGGTGTTTCGTTGGTTTGTGACCGCGCTGGCGGCTGTGGGGTTGTGCGGCGCGGCAAGTGCCCAGCCCGAAGGCGCGCC GATCCGGCTGGCCCTGATTGAAGGGCTTTCGGGCCCGTTTGCCAATGCGGGCGAGGCAGTGGAGCGCAATCTGCGCATGG CCATCGAAGGCGTAAATGCACGCGGTGGTGTGAAGCTGCCTGATGGCCACCATCCGCTTGCGCTTGTGCGCTTCGATAGC AAGAACACCGTCGACGAATCGTTGCTGCAACTGCAGGCCGCCACGGATGCGGGTATCCGCTTCGTGCTGCAGGGCAACAG TTCTGCGGCAGCGGCTGCATTGTCGACGTCGATCTCGCGCTACAACGACCGCCATCCGGATGCGCGCGTGCTGTTCCTGA ACTACGCTGCCGTCGATCCGGCGCTGACCAATGAGGGATGCAGCTTCTGGCATTTCCGCTTCGATGCGTCGGCCGACATG CGCATGCACGCGCTGACGGAAGTGATCCGCGATGACAAGGCGATCAAAAGGGTCTACCTGATTGGGCAGGACTACACGTT CGGCCGCCAGGTGGCGCAATCGGCGCGCCAGCAGTTGCGCGAAAAGCGACCGGACATCGCGATCGTTGGCGAGGTGCTGC ACCCGATCGGCAAGGTGAAGGACTTTGCGCCGTATGTGGCGCGTATTGCCGCGTCGGGTGCGGATACGGTCATCACCGGC AACTGGGGGAACGATCTGACGCTGCTCGTCAAGGCCGCGCGAGATGCCGGGCTCAAGGCGCGCTTCTTTACCTTTTATGG CAACTCGCTTGGTGCACCAGGCGCGATGGGCGAAGCCGGCGTCGGCCGTGTGGTGGCCGTGGCGGAGTGGCATCCGAACC TGGGCGGTGCCAAGTCCGATGCGTTCTACAAGGCCTTCCGTGCGCGTTATCCGGCACCCGCCGACGATTACCCATTGCTG CGCGACCAGATGTTGATCGACATGCTGGCCGCCGCCATCGAGCGTGCCGAGACCACGGAAGCTGCCGCCGTGGCGCGTGC GCTAGAACGCGCATCGTTCGACAACGGCTTCCACCGCATTACGCTGCGAGCGGAGGACCATCAAGCCATTCAGCCGCTCG TCGTCGCGCAGATGGAGCGGGCGGGCATGCCCGGTGCGCTGTTTGATATCGAGGGCTCGGGCTATGGTTTTCGTACGCTA AAAGTGATTCAAGGGGCGCAAACCGCATTGCCCACGACCTGCAAAATGGTGCGCTATTAA
Upstream 100 bases:
>100_bases CGATGCCTTCAGTGTAGGAGGCCGTGCGGTCTCTGCCGGCTTGTGGGCTTGTGCCGACATGCGGCGGCGCTTTACCATCC GCGCTTCACGGAGATTTGCC
Downstream 100 bases:
>100_bases GCAGGGCGGCACAGCACTGTCGTCATGGCGCGGTTCTGCGCTATAATCGCGGTCTTGCTGTCCAGACCGATTTTGGATGG GCAGCAAGATCATTGTTCAA
Product: putative transporter signal peptide protein
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MVFRWFVTALAAVGLCGAASAQPEGAPIRLALIEGLSGPFANAGEAVERNLRMAIEGVNARGGVKLPDGHHPLALVRFDS KNTVDESLLQLQAATDAGIRFVLQGNSSAAAAALSTSISRYNDRHPDARVLFLNYAAVDPALTNEGCSFWHFRFDASADM RMHALTEVIRDDKAIKRVYLIGQDYTFGRQVAQSARQQLREKRPDIAIVGEVLHPIGKVKDFAPYVARIAASGADTVITG NWGNDLTLLVKAARDAGLKARFFTFYGNSLGAPGAMGEAGVGRVVAVAEWHPNLGGAKSDAFYKAFRARYPAPADDYPLL RDQMLIDMLAAAIERAETTEAAAVARALERASFDNGFHRITLRAEDHQAIQPLVVAQMERAGMPGALFDIEGSGYGFRTL KVIQGAQTALPTTCKMVRY
Sequences:
>Translated_419_residues MVFRWFVTALAAVGLCGAASAQPEGAPIRLALIEGLSGPFANAGEAVERNLRMAIEGVNARGGVKLPDGHHPLALVRFDS KNTVDESLLQLQAATDAGIRFVLQGNSSAAAAALSTSISRYNDRHPDARVLFLNYAAVDPALTNEGCSFWHFRFDASADM RMHALTEVIRDDKAIKRVYLIGQDYTFGRQVAQSARQQLREKRPDIAIVGEVLHPIGKVKDFAPYVARIAASGADTVITG NWGNDLTLLVKAARDAGLKARFFTFYGNSLGAPGAMGEAGVGRVVAVAEWHPNLGGAKSDAFYKAFRARYPAPADDYPLL RDQMLIDMLAAAIERAETTEAAAVARALERASFDNGFHRITLRAEDHQAIQPLVVAQMERAGMPGALFDIEGSGYGFRTL KVIQGAQTALPTTCKMVRY >Mature_419_residues MVFRWFVTALAAVGLCGAASAQPEGAPIRLALIEGLSGPFANAGEAVERNLRMAIEGVNARGGVKLPDGHHPLALVRFDS KNTVDESLLQLQAATDAGIRFVLQGNSSAAAAALSTSISRYNDRHPDARVLFLNYAAVDPALTNEGCSFWHFRFDASADM RMHALTEVIRDDKAIKRVYLIGQDYTFGRQVAQSARQQLREKRPDIAIVGEVLHPIGKVKDFAPYVARIAASGADTVITG NWGNDLTLLVKAARDAGLKARFFTFYGNSLGAPGAMGEAGVGRVVAVAEWHPNLGGAKSDAFYKAFRARYPAPADDYPLL RDQMLIDMLAAAIERAETTEAAAVARALERASFDNGFHRITLRAEDHQAIQPLVVAQMERAGMPGALFDIEGSGYGFRTL KVIQGAQTALPTTCKMVRY
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=324, Percent_Identity=22.2222222222222, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI48994941, Length=236, Percent_Identity=22.4576271186441, Blast_Score=66, Evalue=4e-12,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000709 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45203; Mature: 45203
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFRWFVTALAAVGLCGAASAQPEGAPIRLALIEGLSGPFANAGEAVERNLRMAIEGVNA CCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHEEECCCC RGGVKLPDGHHPLALVRFDSKNTVDESLLQLQAATDAGIRFVLQGNSSAAAAALSTSISR CCCEECCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHH YNDRHPDARVLFLNYAAVDPALTNEGCSFWHFRFDASADMRMHALTEVIRDDKAIKRVYL HCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCHHEEEEEE IGQDYTFGRQVAQSARQQLREKRPDIAIVGEVLHPIGKVKDFAPYVARIAASGADTVITG ECCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC NWGNDLTLLVKAARDAGLKARFFTFYGNSLGAPGAMGEAGVGRVVAVAEWHPNLGGAKSD CCCCCEEEEEEEHHCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHH AFYKAFRARYPAPADDYPLLRDQMLIDMLAAAIERAETTEAAAVARALERASFDNGFHRI HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE TLRAEDHQAIQPLVVAQMERAGMPGALFDIEGSGYGFRTLKVIQGAQTALPTTCKMVRY EEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHCC >Mature Secondary Structure MVFRWFVTALAAVGLCGAASAQPEGAPIRLALIEGLSGPFANAGEAVERNLRMAIEGVNA CCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHEEECCCC RGGVKLPDGHHPLALVRFDSKNTVDESLLQLQAATDAGIRFVLQGNSSAAAAALSTSISR CCCEECCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHH YNDRHPDARVLFLNYAAVDPALTNEGCSFWHFRFDASADMRMHALTEVIRDDKAIKRVYL HCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCHHEEEEEE IGQDYTFGRQVAQSARQQLREKRPDIAIVGEVLHPIGKVKDFAPYVARIAASGADTVITG ECCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC NWGNDLTLLVKAARDAGLKARFFTFYGNSLGAPGAMGEAGVGRVVAVAEWHPNLGGAKSD CCCCCEEEEEEEHHCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHH AFYKAFRARYPAPADDYPLLRDQMLIDMLAAAIERAETTEAAAVARALERASFDNGFHRI HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE TLRAEDHQAIQPLVVAQMERAGMPGALFDIEGSGYGFRTLKVIQGAQTALPTTCKMVRY EEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA