| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187929297
Identifier: 187929297
GI number: 187929297
Start: 2327294
End: 2328247
Strand: Reverse
Name: 187929297
Synonym: Rpic_2218
Alternate gene names: NA
Gene position: 2328247-2327294 (Counterclockwise)
Preceding gene: 187929298
Following gene: 187929296
Centisome position: 59.05
GC content: 60.59
Gene sequence:
>954_bases ATGAGCCGCCTGTTCGAGCAAAACCGCATCGCCATCGTCTGGGATTTCGACAAGACACTGATCCCGCGCTACATGCAAGT GCCGCTGTTCGATCGCTTCAATATCGCCGAGCAGGGTTTCTGGGACGAAGTGGCTGCAGGCTCGCGCGAAATTGAATCGC GCGGTCAGAAGGTCAACCAGGAAACGTTCTACCTCAATGTGCTGCTGCGCCATGTGCGCGACGGCCGCATGGGCGGGCTC GACAATGCAACGCTGCGCGAACTGGGCGCCGAACTCGAATTCTTCCCCGGCGTGACTGATTTCTTCGAGCGCAGCAAGGC GTGGGTGCGCGACAACGCAACCTACCAGGCGTTCGACATCAAGCTCGAACACTACATCGTCAGCACGGGCCTGACAGAGA TGATCAAGGGCTCGCCCATCGCCCCGTACATCGACGGCGTGTGGGGCTGCGAATTTCTGGAGGCGTCCGACTCGAACGCG GATGGCCGGCCGGTCATTGCGGAAGTCATCTACGCCATCGATAACACCACCAAGACGCGTGCGCTGTTTGAGATCAACAA GGGCGTCAATAAGCACCCGGAAGCGGTAAGTGTGAACTCGTCGATTGCCGAGGACGAGCGCCGCGTGCCCTTCGCCAACA TGATCTACGTCGCCGATGGGCCGAGTGATATTCCGGCGTTTTCGGTCGCCCGCAAGGGCGGCGGCCGCACCTATGCGGTC TACAACCCGGAGAGCCCTCGCTCATTCGAGCAGGCTGACAACTTGCGTGCCGATGATCGCGTCGACATGCTCGGCCCGGC CGACTATCGCGCCGGCTCGCCGACGGAGATGTGGCTCAAGTTGCATATCGGCAAGATCGCCGACGGCATCGTCCACGGCA AACAAGAAATCATGCGCGAAACCACGCGCGGCATTCCGCAGCACTTTGTTGAACCGAGGCGTAGCGTCTCGTAA
Upstream 100 bases:
>100_bases GCGAGCGATTTTCGCCAAGAAAAACGGCTGGACGATGTCCAGCCGTTTTTTTGTTTACACTGCGTCGCGAGTTCTTCCTG TTGTCCCTTCGCGCCCCATC
Downstream 100 bases:
>100_bases CCCGCGCACTGCGCCGTAACCCTCTCGATCCGATTCTCATGAAAGCGATTGAAATCACCCAGTACGGTGGCCCTGAAGTC TTGAAGCTTGGCGAGCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSRLFEQNRIAIVWDFDKTLIPRYMQVPLFDRFNIAEQGFWDEVAAGSREIESRGQKVNQETFYLNVLLRHVRDGRMGGL DNATLRELGAELEFFPGVTDFFERSKAWVRDNATYQAFDIKLEHYIVSTGLTEMIKGSPIAPYIDGVWGCEFLEASDSNA DGRPVIAEVIYAIDNTTKTRALFEINKGVNKHPEAVSVNSSIAEDERRVPFANMIYVADGPSDIPAFSVARKGGGRTYAV YNPESPRSFEQADNLRADDRVDMLGPADYRAGSPTEMWLKLHIGKIADGIVHGKQEIMRETTRGIPQHFVEPRRSVS
Sequences:
>Translated_317_residues MSRLFEQNRIAIVWDFDKTLIPRYMQVPLFDRFNIAEQGFWDEVAAGSREIESRGQKVNQETFYLNVLLRHVRDGRMGGL DNATLRELGAELEFFPGVTDFFERSKAWVRDNATYQAFDIKLEHYIVSTGLTEMIKGSPIAPYIDGVWGCEFLEASDSNA DGRPVIAEVIYAIDNTTKTRALFEINKGVNKHPEAVSVNSSIAEDERRVPFANMIYVADGPSDIPAFSVARKGGGRTYAV YNPESPRSFEQADNLRADDRVDMLGPADYRAGSPTEMWLKLHIGKIADGIVHGKQEIMRETTRGIPQHFVEPRRSVS >Mature_316_residues SRLFEQNRIAIVWDFDKTLIPRYMQVPLFDRFNIAEQGFWDEVAAGSREIESRGQKVNQETFYLNVLLRHVRDGRMGGLD NATLRELGAELEFFPGVTDFFERSKAWVRDNATYQAFDIKLEHYIVSTGLTEMIKGSPIAPYIDGVWGCEFLEASDSNAD GRPVIAEVIYAIDNTTKTRALFEINKGVNKHPEAVSVNSSIAEDERRVPFANMIYVADGPSDIPAFSVARKGGGRTYAVY NPESPRSFEQADNLRADDRVDMLGPADYRAGSPTEMWLKLHIGKIADGIVHGKQEIMRETTRGIPQHFVEPRRSVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35800; Mature: 35669
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLFEQNRIAIVWDFDKTLIPRYMQVPLFDRFNIAEQGFWDEVAAGSREIESRGQKVNQ CCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCHHCCCHHHHHCCHHHHHHHCCCCCC ETFYLNVLLRHVRDGRMGGLDNATLRELGAELEFFPGVTDFFERSKAWVRDNATYQAFDI HHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEECCCHHHHHHHCHHHHHCCCEEEEEEE KLEHYIVSTGLTEMIKGSPIAPYIDGVWGCEFLEASDSNADGRPVIAEVIYAIDNTTKTR EEEEEEEHHCHHHHHCCCCCCHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCHHH ALFEINKGVNKHPEAVSVNSSIAEDERRVPFANMIYVADGPSDIPAFSVARKGGGRTYAV EEEEECCCCCCCCCEEECCCHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHCCCCEEEEE YNPESPRSFEQADNLRADDRVDMLGPADYRAGSPTEMWLKLHIGKIADGIVHGKQEIMRE ECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHH TTRGIPQHFVEPRRSVS HHCCCHHHHHCHHHCCC >Mature Secondary Structure SRLFEQNRIAIVWDFDKTLIPRYMQVPLFDRFNIAEQGFWDEVAAGSREIESRGQKVNQ CCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCHHCCCHHHHHCCHHHHHHHCCCCCC ETFYLNVLLRHVRDGRMGGLDNATLRELGAELEFFPGVTDFFERSKAWVRDNATYQAFDI HHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEECCCHHHHHHHCHHHHHCCCEEEEEEE KLEHYIVSTGLTEMIKGSPIAPYIDGVWGCEFLEASDSNADGRPVIAEVIYAIDNTTKTR EEEEEEEHHCHHHHHCCCCCCHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCHHH ALFEINKGVNKHPEAVSVNSSIAEDERRVPFANMIYVADGPSDIPAFSVARKGGGRTYAV EEEEECCCCCCCCCEEECCCHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHCCCCEEEEE YNPESPRSFEQADNLRADDRVDMLGPADYRAGSPTEMWLKLHIGKIADGIVHGKQEIMRE ECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHH TTRGIPQHFVEPRRSVS HHCCCHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]