| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is gltP [H]
Identifier: 187929183
GI number: 187929183
Start: 2219359
End: 2220636
Strand: Reverse
Name: gltP [H]
Synonym: Rpic_2104
Alternate gene names: 187929183
Gene position: 2220636-2219359 (Counterclockwise)
Preceding gene: 187929189
Following gene: 187929178
Centisome position: 56.32
GC content: 62.52
Gene sequence:
>1278_bases TTGAACACCAAACGTCTGACCTCCCACATTGGGCTGGCAATGCTGCTGGGCATTGCCGTCGGCTGGGGTTGCCACGAATA CGCCAAGGACGCTGCGGCGGCCAAGGACATCGCTTCGTACTTCAGCATCATCACCGACATCTTCCTGCGCATGATCAAGA TGATCATTGCGCCGCTGGTGTTCTCGACCCTGGTGACGGGCCTGGCAAGCATGAGTGGCGGCCGTTCGGTGGGCCGCGTG GGCCTGCGCGCGATGATCTGGTTTGTGTGCGCGTCGGCCACGTCGCTGGCGCTGGGCATGCTGCTGGTCAACTTCTTCCA ACCCGGCATGCACATGAACCTGGCGCTGCCGGATGTGTCGGCCACGTCGGGCCTGAAGACGGGTGACTTCACCCTCAAGG CCTTCATCACGCACGTGTTTCCGCGCAGCATCGTGGAGGCCATGGCCACCAACGAAATCCTGCAGATCTTGGTGTTTTCG CTGTTCTTCGGCGCCGCGCTGTCGACGATGAAGAATCCGATGGACAGTGTGATCGGCCGTGGCCTGGAAGAACTGACCAA GCTGATGTTCCGCATTACCGACTACGTGATGCGCTTTGCACCGCTGGGCGTATTTGCCGCCATGGCCGCTGCGATCACGG TGGAAGGCGTGGGCGTGCTGTGGACCTACGGCAAGCTGATCGGCGAGTTCTACCTGGGCCTGGCACTGCTGTGGGCGATC CTGTTCCTGGTGGGCTATGTGTTGCTGGGCCGCTCGCTGGGCCGTCTGCTTGGGCTGATTCGCGAGCCGACGCTGCTGGC GTTCGCCACCGCAAGCAGCGAATCCGCTTACCCGAAGACGATCGAGGCGCTGGACCGGTTTGGCGTGCCCAAGCGCATCT CCAGCTTCGTCCTGCCGCTGGGCTACTCGTTCAACCTGGATGGCTCGATGATGTACCAGGCGTTTGCGGTGCTGTTTATC GCGCAGGCCTACAACATCGAGATGAGCTTCACGCAACAGGTCACGCTGCTGCTGGTGCTGATGCTCACGAGCAAGGGGAT GGCCGGCGTGGCGCGTGCATCGCTGGTGGTGGTGGCGGCCACGCTGCCGATGTTCCATCTGCCCGAAGCCGGTCTGCTGC TGATCATCGGGATCGACCAGTTCTTCGACATGGGCCGCACGGCAACCAACGTGATCGGCAACAGCCTGGCCACGGCCGTG GTGGCAAAGTACGAGCCGGCAGAAGACGAAGTGGCGGCGGACGTTGCCGAACCGGCAGTGCAACCGACGGTTGGCTGA
Upstream 100 bases:
>100_bases CTTTTTACAAAGCGTGATGAACTTGGGCCAGCCCTTGGCCCCATGAGATCCGCGTCTGTCGCGCGCCGCCTTCCGGCCAC GGTATTCCTTGGAGAAAGTC
Downstream 100 bases:
>100_bases CATTCAGCCAAGATGACAATGCGCCGCCTTTCAGGGCGGCGTTGTCCTATTCGGGCGGCGTTATTCGGGCTGGGAAGCGA GCGACACCGCGACGGGGCTC
Product: sodium:dicarboxylate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MNTKRLTSHIGLAMLLGIAVGWGCHEYAKDAAAAKDIASYFSIITDIFLRMIKMIIAPLVFSTLVTGLASMSGGRSVGRV GLRAMIWFVCASATSLALGMLLVNFFQPGMHMNLALPDVSATSGLKTGDFTLKAFITHVFPRSIVEAMATNEILQILVFS LFFGAALSTMKNPMDSVIGRGLEELTKLMFRITDYVMRFAPLGVFAAMAAAITVEGVGVLWTYGKLIGEFYLGLALLWAI LFLVGYVLLGRSLGRLLGLIREPTLLAFATASSESAYPKTIEALDRFGVPKRISSFVLPLGYSFNLDGSMMYQAFAVLFI AQAYNIEMSFTQQVTLLLVLMLTSKGMAGVARASLVVVAATLPMFHLPEAGLLLIIGIDQFFDMGRTATNVIGNSLATAV VAKYEPAEDEVAADVAEPAVQPTVG
Sequences:
>Translated_425_residues MNTKRLTSHIGLAMLLGIAVGWGCHEYAKDAAAAKDIASYFSIITDIFLRMIKMIIAPLVFSTLVTGLASMSGGRSVGRV GLRAMIWFVCASATSLALGMLLVNFFQPGMHMNLALPDVSATSGLKTGDFTLKAFITHVFPRSIVEAMATNEILQILVFS LFFGAALSTMKNPMDSVIGRGLEELTKLMFRITDYVMRFAPLGVFAAMAAAITVEGVGVLWTYGKLIGEFYLGLALLWAI LFLVGYVLLGRSLGRLLGLIREPTLLAFATASSESAYPKTIEALDRFGVPKRISSFVLPLGYSFNLDGSMMYQAFAVLFI AQAYNIEMSFTQQVTLLLVLMLTSKGMAGVARASLVVVAATLPMFHLPEAGLLLIIGIDQFFDMGRTATNVIGNSLATAV VAKYEPAEDEVAADVAEPAVQPTVG >Mature_425_residues MNTKRLTSHIGLAMLLGIAVGWGCHEYAKDAAAAKDIASYFSIITDIFLRMIKMIIAPLVFSTLVTGLASMSGGRSVGRV GLRAMIWFVCASATSLALGMLLVNFFQPGMHMNLALPDVSATSGLKTGDFTLKAFITHVFPRSIVEAMATNEILQILVFS LFFGAALSTMKNPMDSVIGRGLEELTKLMFRITDYVMRFAPLGVFAAMAAAITVEGVGVLWTYGKLIGEFYLGLALLWAI LFLVGYVLLGRSLGRLLGLIREPTLLAFATASSESAYPKTIEALDRFGVPKRISSFVLPLGYSFNLDGSMMYQAFAVLFI AQAYNIEMSFTQQVTLLLVLMLTSKGMAGVARASLVVVAATLPMFHLPEAGLLLIIGIDQFFDMGRTATNVIGNSLATAV VAKYEPAEDEVAADVAEPAVQPTVG
Specific function: This carrier protein is part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI169790839, Length=463, Percent_Identity=28.5097192224622, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI66773030, Length=451, Percent_Identity=27.4944567627494, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI40254478, Length=473, Percent_Identity=26.0042283298097, Blast_Score=122, Evalue=4e-28, Organism=Homo sapiens, GI21314632, Length=426, Percent_Identity=28.169014084507, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI4827012, Length=276, Percent_Identity=31.8840579710145, Blast_Score=118, Evalue=9e-27, Organism=Homo sapiens, GI5032093, Length=387, Percent_Identity=28.1653746770026, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI262359914, Length=400, Percent_Identity=27, Blast_Score=109, Evalue=6e-24, Organism=Homo sapiens, GI223468564, Length=273, Percent_Identity=30.4029304029304, Blast_Score=106, Evalue=5e-23, Organism=Homo sapiens, GI223468566, Length=280, Percent_Identity=30.7142857142857, Blast_Score=105, Evalue=6e-23, Organism=Homo sapiens, GI194239697, Length=140, Percent_Identity=38.5714285714286, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI301601644, Length=152, Percent_Identity=32.2368421052632, Blast_Score=86, Evalue=7e-17, Organism=Escherichia coli, GI1790514, Length=430, Percent_Identity=39.7674418604651, Blast_Score=278, Evalue=4e-76, Organism=Escherichia coli, GI1789947, Length=386, Percent_Identity=40.9326424870466, Blast_Score=265, Evalue=3e-72, Organism=Escherichia coli, GI1788024, Length=414, Percent_Identity=24.1545893719807, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1789473, Length=393, Percent_Identity=23.1552162849873, Blast_Score=75, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17537407, Length=454, Percent_Identity=27.3127753303965, Blast_Score=148, Evalue=5e-36, Organism=Caenorhabditis elegans, GI71996953, Length=460, Percent_Identity=27.1739130434783, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI71983099, Length=432, Percent_Identity=26.1574074074074, Blast_Score=125, Evalue=5e-29, Organism=Caenorhabditis elegans, GI71983106, Length=432, Percent_Identity=26.1574074074074, Blast_Score=124, Evalue=6e-29, Organism=Caenorhabditis elegans, GI193206654, Length=405, Percent_Identity=25.679012345679, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI193206505, Length=433, Percent_Identity=26.0969976905312, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17541374, Length=158, Percent_Identity=34.1772151898734, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI24583025, Length=427, Percent_Identity=27.1662763466042, Blast_Score=131, Evalue=8e-31, Organism=Drosophila melanogaster, GI17137668, Length=427, Percent_Identity=27.1662763466042, Blast_Score=131, Evalue=8e-31, Organism=Drosophila melanogaster, GI24583023, Length=427, Percent_Identity=27.1662763466042, Blast_Score=131, Evalue=8e-31, Organism=Drosophila melanogaster, GI281360483, Length=423, Percent_Identity=26.7139479905437, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI17137666, Length=423, Percent_Identity=26.7139479905437, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI281360481, Length=423, Percent_Identity=26.7139479905437, Blast_Score=91, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 45650; Mature: 45650
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTKRLTSHIGLAMLLGIAVGWGCHEYAKDAAAAKDIASYFSIITDIFLRMIKMIIAPLV CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSTLVTGLASMSGGRSVGRVGLRAMIWFVCASATSLALGMLLVNFFQPGMHMNLALPDVS HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC ATSGLKTGDFTLKAFITHVFPRSIVEAMATNEILQILVFSLFFGAALSTMKNPMDSVIGR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC GLEELTKLMFRITDYVMRFAPLGVFAAMAAAITVEGVGVLWTYGKLIGEFYLGLALLWAI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LFLVGYVLLGRSLGRLLGLIREPTLLAFATASSESAYPKTIEALDRFGVPKRISSFVLPL HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHCC GYSFNLDGSMMYQAFAVLFIAQAYNIEMSFTQQVTLLLVLMLTSKGMAGVARASLVVVAA CCEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH TLPMFHLPEAGLLLIIGIDQFFDMGRTATNVIGNSLATAVVAKYEPAEDEVAADVAEPAV HCCHHCCCCCCEEEEEECHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC QPTVG CCCCC >Mature Secondary Structure MNTKRLTSHIGLAMLLGIAVGWGCHEYAKDAAAAKDIASYFSIITDIFLRMIKMIIAPLV CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSTLVTGLASMSGGRSVGRVGLRAMIWFVCASATSLALGMLLVNFFQPGMHMNLALPDVS HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC ATSGLKTGDFTLKAFITHVFPRSIVEAMATNEILQILVFSLFFGAALSTMKNPMDSVIGR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC GLEELTKLMFRITDYVMRFAPLGVFAAMAAAITVEGVGVLWTYGKLIGEFYLGLALLWAI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LFLVGYVLLGRSLGRLLGLIREPTLLAFATASSESAYPKTIEALDRFGVPKRISSFVLPL HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHCC GYSFNLDGSMMYQAFAVLFIAQAYNIEMSFTQQVTLLLVLMLTSKGMAGVARASLVVVAA CCEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH TLPMFHLPEAGLLLIIGIDQFFDMGRTATNVIGNSLATAVVAKYEPAEDEVAADVAEPAV HCCHHCCCCCCEEEEEECHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC QPTVG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1971622; 1551855; 8265357; 9278503 [H]