| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187929189
Identifier: 187929189
GI number: 187929189
Start: 2225098
End: 2225487
Strand: Reverse
Name: 187929189
Synonym: Rpic_2110
Alternate gene names: NA
Gene position: 2225487-2225098 (Counterclockwise)
Preceding gene: 187929190
Following gene: 187929183
Centisome position: 56.45
GC content: 64.36
Gene sequence:
>390_bases ATGTCATCACGCGCGTTGCCCCTCGTCTATGCCTGCTCGGGTTGTTCGAGCGTGGCGCAAGCGGCAAACCGCCTGGCCGT GGATTTGGACCGTGCAGGCAGGGCAGAGATGTCTTGCATCAGCGGTGTCGGCGGCGGGGTTCGCGCGCTCGTCAAGACAG CACGCAGCGGGCGGCCTATTCTCGCGCTCGACGGTTGTGCACTGGCGTGCGTCAAGGCCTGTCTGGCAACGGCGGGCGTG GCACCGGACGTTCACCTCGTGCTCAACCAGTGCGGCGCCAAGAAGCGTTATCACGCTGATTGCAGCGACGATGAATTGAG TGCTGCCGCCGCGCTGGTGGATGATGCCGTCAACACGCTCAAGCATCGGCTCGACACCGCAGGCGATTGA
Upstream 100 bases:
>100_bases GGCGACACGGAGCTTGGGCTGATCGTCAAGAACTGGCTCGATGCGGCCGCACGCCCGGCGTGGCTTGCACGCTGGCAATC GCGGTAGGGAGAGGGGCGCC
Downstream 100 bases:
>100_bases CCTGCGTCGAGCTTCTACTGTTATCCCGCGATGAGCTGACGCTGCAACGCCGTGGTGTTTTGGATCACGACCTCGCGGCC TTCCACGCGGATCAACCCGT
Product: DGC domain-containing protein
Products: NA
Alternate protein names: DGC Domain-Containing Protein; Lipoprotein; DGC Domain Superfamily; Dgc Domain Protein; Lipoprotein COG
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MSSRALPLVYACSGCSSVAQAANRLAVDLDRAGRAEMSCISGVGGGVRALVKTARSGRPILALDGCALACVKACLATAGV APDVHLVLNQCGAKKRYHADCSDDELSAAAALVDDAVNTLKHRLDTAGD
Sequences:
>Translated_129_residues MSSRALPLVYACSGCSSVAQAANRLAVDLDRAGRAEMSCISGVGGGVRALVKTARSGRPILALDGCALACVKACLATAGV APDVHLVLNQCGAKKRYHADCSDDELSAAAALVDDAVNTLKHRLDTAGD >Mature_128_residues SSRALPLVYACSGCSSVAQAANRLAVDLDRAGRAEMSCISGVGGGVRALVKTARSGRPILALDGCALACVKACLATAGVA PDVHLVLNQCGAKKRYHADCSDDELSAAAALVDDAVNTLKHRLDTAGD
Specific function: Unknown
COG id: COG4273
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13097; Mature: 12966
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 6.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSRALPLVYACSGCSSVAQAANRLAVDLDRAGRAEMSCISGVGGGVRALVKTARSGRPI CCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCE LALDGCALACVKACLATAGVAPDVHLVLNQCGAKKRYHADCSDDELSAAAALVDDAVNTL EEECCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH KHRLDTAGD HHHHCCCCC >Mature Secondary Structure SSRALPLVYACSGCSSVAQAANRLAVDLDRAGRAEMSCISGVGGGVRALVKTARSGRPI CCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCE LALDGCALACVKACLATAGVAPDVHLVLNQCGAKKRYHADCSDDELSAAAALVDDAVNTL EEECCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH KHRLDTAGD HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA