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The map label for this gene is yafS [H]

Identifier: 187929119

GI number: 187929119

Start: 2150563

End: 2151351

Strand: Direct

Name: yafS [H]

Synonym: Rpic_2040

Alternate gene names: 187929119

Gene position: 2150563-2151351 (Clockwise)

Preceding gene: 187929110

Following gene: 187929120

Centisome position: 54.55

GC content: 65.91

Gene sequence:

>789_bases
ATGTTCGGCTATCACGCGCTGCAGCTAGGCCATCCTGGCTTTGGGGCGCTGCGCGAGAACCGCATCCCGCTGATTGCCCG
CGTGGTGGACGACATCGACCCGACGGCCCCCACCGAAACGCTCGACCCGATGGATGGCGACCCCGCTGAATCCGCCGATG
CGGCCGACGGAGAACCCGACACCAGCACGCCACCACGCCAAGCCACGCCCCGCGTGATCTGCCGCTATGACGAACTGCCC
TTCGCTTCGCAGAGCATCGACCTCGTCGCCTTGCCCCACGTGCTGGAGTTCACTGACGATCCGCACGAAGTGCTGCGCGA
AGTGGCGCGCGTGCTGATGCCCGAGGGGCGCCTGATCATCACCGGCTTCAACCCGCTGAGCCTGTGGGGCATGCGCCAGG
GCATGCGGCGCCTGGGCACGGAATCGTTTCTCCCTGCACAGAGCCAGATGATTGCGTTCACGCGTCTGAAAGACTGGCTC
AAGCTGCTCGGATTTGATATCGTGCGCGGCCGTTTCGGCTGCTACTGCCCGCCTAATCGCTCGGACAAATGGCTGCAGCG
CACCGCCTTCATGGAAAAGGCCGGCGACCGTTGGTGGCCGATCTTCGGTGCGGTTTACATGCTGCAGGCGGTCAAGCGCG
TGCGCTCCATGCGACTGGTCGGTCCGGCATGGAAGACGCGCAAATCGCCGGCGCTGGTGCCGGCCGGAACGCCGGTCGCG
ACGCCTTCGGGATCACATTCGACCAAGGCGCCATCGGCCACGGCGCGTGACGGCAAATCGGGCGCGTGA

Upstream 100 bases:

>100_bases
CGATCGTCGCATTATAGATTGGCACCACTGGCTCGCTTCGCCGCCCGGGCAATATGTCCTGCGGTGGGAGCAGGCCCAGT
TCGATCGCACGGTGGCCGAC

Downstream 100 bases:

>100_bases
GCGCGACCCTTCCACTCACTGATCACCCATCGTTTCTCAATGCAGGAAGTCACCGTTTATTCCGATGGCGCGTGCAAGGG
CAACCCCGGCCTTGGTGGCT

Product: type 11 methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MFGYHALQLGHPGFGALRENRIPLIARVVDDIDPTAPTETLDPMDGDPAESADAADGEPDTSTPPRQATPRVICRYDELP
FASQSIDLVALPHVLEFTDDPHEVLREVARVLMPEGRLIITGFNPLSLWGMRQGMRRLGTESFLPAQSQMIAFTRLKDWL
KLLGFDIVRGRFGCYCPPNRSDKWLQRTAFMEKAGDRWWPIFGAVYMLQAVKRVRSMRLVGPAWKTRKSPALVPAGTPVA
TPSGSHSTKAPSATARDGKSGA

Sequences:

>Translated_262_residues
MFGYHALQLGHPGFGALRENRIPLIARVVDDIDPTAPTETLDPMDGDPAESADAADGEPDTSTPPRQATPRVICRYDELP
FASQSIDLVALPHVLEFTDDPHEVLREVARVLMPEGRLIITGFNPLSLWGMRQGMRRLGTESFLPAQSQMIAFTRLKDWL
KLLGFDIVRGRFGCYCPPNRSDKWLQRTAFMEKAGDRWWPIFGAVYMLQAVKRVRSMRLVGPAWKTRKSPALVPAGTPVA
TPSGSHSTKAPSATARDGKSGA
>Mature_262_residues
MFGYHALQLGHPGFGALRENRIPLIARVVDDIDPTAPTETLDPMDGDPAESADAADGEPDTSTPPRQATPRVICRYDELP
FASQSIDLVALPHVLEFTDDPHEVLREVARVLMPEGRLIITGFNPLSLWGMRQGMRRLGTESFLPAQSQMIAFTRLKDWL
KLLGFDIVRGRFGCYCPPNRSDKWLQRTAFMEKAGDRWWPIFGAVYMLQAVKRVRSMRLVGPAWKTRKSPALVPAGTPVA
TPSGSHSTKAPSATARDGKSGA

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081700, Length=93, Percent_Identity=43.010752688172, Blast_Score=81, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 28921; Mature: 28921

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGYHALQLGHPGFGALRENRIPLIARVVDDIDPTAPTETLDPMDGDPAESADAADGEPD
CCCCEEEEECCCCCCHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TSTPPRQATPRVICRYDELPFASQSIDLVALPHVLEFTDDPHEVLREVARVLMPEGRLII
CCCCCCCCCCCEEEEECCCCCCCCCCCEEECCHHHHCCCCHHHHHHHHHHHHCCCCCEEE
TGFNPLSLWGMRQGMRRLGTESFLPAQSQMIAFTRLKDWLKLLGFDIVRGRFGCYCPPNR
ECCCHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
SDKWLQRTAFMEKAGDRWWPIFGAVYMLQAVKRVRSMRLVGPAWKTRKSPALVPAGTPVA
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCC
TPSGSHSTKAPSATARDGKSGA
CCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFGYHALQLGHPGFGALRENRIPLIARVVDDIDPTAPTETLDPMDGDPAESADAADGEPD
CCCCEEEEECCCCCCHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TSTPPRQATPRVICRYDELPFASQSIDLVALPHVLEFTDDPHEVLREVARVLMPEGRLII
CCCCCCCCCCCEEEEECCCCCCCCCCCEEECCHHHHCCCCHHHHHHHHHHHHCCCCCEEE
TGFNPLSLWGMRQGMRRLGTESFLPAQSQMIAFTRLKDWLKLLGFDIVRGRFGCYCPPNR
ECCCHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
SDKWLQRTAFMEKAGDRWWPIFGAVYMLQAVKRVRSMRLVGPAWKTRKSPALVPAGTPVA
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCC
TPSGSHSTKAPSATARDGKSGA
CCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]