Click here to switch to the map view.

The map label for this gene is motB [H]

Identifier: 187929080

GI number: 187929080

Start: 2108587

End: 2109090

Strand: Reverse

Name: motB [H]

Synonym: Rpic_2000

Alternate gene names: 187929080

Gene position: 2109090-2108587 (Counterclockwise)

Preceding gene: 187929081

Following gene: 187929078

Centisome position: 53.5

GC content: 63.69

Gene sequence:

>504_bases
GTGGAGGCACTGTCCGCGCAATTAGCCAAGCAGCGTGAGTCGTTGTCGGAACGCATTGCGCGCGCGCTGGCTCCCGAAGC
CGGGGCGGCCCCGGTCGGCATCAGCACAAAAGACGATCGAATCTATATCTCCTTCAATAGCGACGAAGGTTTCGCCTCCG
GCCGAGCAGACCTTATGCTGATGCTCGCGCGCCAACTCGACCGGCTCGCCACCGTGCTTGCCGACACGCGTGGCAAGGTG
ACCGTCCTCGGGCACACCGACGATGCCCCCGGCCCGCGCGATCGCATGGAGTCGAACCTCGCGCTGTCAACCGCACGCGC
CACGGCGGTCGCGCGACATCTTCAAGAGCGCGGGATCGCTTCGGATCGCTTGTCCATCATTGGTCGTGGCGTGAAAGATC
CCGTTGGAGACAACCGCACCGCCGCGGGCAGGGCGTTGAACCGACGCGTGGAGATCATTCTTGAAAGCGTGCCAACTTCG
CAGCCAACAAGCCCTCAGCAATAG

Upstream 100 bases:

>100_bases
TTCCGCTGTCGGATGTGAGCTCATCGTTTTCGATGGAGCAGATCAAGTATTCGACTGCGCTGCCGGTGCGGGATGGGGGG
CAGGGGGATTGAGGGCTTGG

Downstream 100 bases:

>100_bases
GGGGGCACGAGGCTAATCTGTGTGGCGAGTGGTGGGGGGAAAGTGGCGTTGAGGGTCAGTCGAGATTGTGGGATACGTGC
CAAGGATAAAATCTGAGCAG

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: Chemotaxis protein MotB [H]

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MEALSAQLAKQRESLSERIARALAPEAGAAPVGISTKDDRIYISFNSDEGFASGRADLMLMLARQLDRLATVLADTRGKV
TVLGHTDDAPGPRDRMESNLALSTARATAVARHLQERGIASDRLSIIGRGVKDPVGDNRTAAGRALNRRVEIILESVPTS
QPTSPQQ

Sequences:

>Translated_167_residues
MEALSAQLAKQRESLSERIARALAPEAGAAPVGISTKDDRIYISFNSDEGFASGRADLMLMLARQLDRLATVLADTRGKV
TVLGHTDDAPGPRDRMESNLALSTARATAVARHLQERGIASDRLSIIGRGVKDPVGDNRTAAGRALNRRVEIILESVPTS
QPTSPQQ
>Mature_167_residues
MEALSAQLAKQRESLSERIARALAPEAGAAPVGISTKDDRIYISFNSDEGFASGRADLMLMLARQLDRLATVLADTRGKV
TVLGHTDDAPGPRDRMESNLALSTARATAVARHLQERGIASDRLSIIGRGVKDPVGDNRTAAGRALNRRVEIILESVPTS
QPTSPQQ

Specific function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for the rotation of the flagellar motor. Might be a linker that fastens the torque- generating machinery to the cell wall [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell inner membrane; Single- pass type II membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 17883; Mature: 17883

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEALSAQLAKQRESLSERIARALAPEAGAAPVGISTKDDRIYISFNSDEGFASGRADLML
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHH
MLARQLDRLATVLADTRGKVTVLGHTDDAPGPRDRMESNLALSTARATAVARHLQERGIA
HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCC
SDRLSIIGRGVKDPVGDNRTAAGRALNRRVEIILESVPTSQPTSPQQ
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MEALSAQLAKQRESLSERIARALAPEAGAAPVGISTKDDRIYISFNSDEGFASGRADLML
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHH
MLARQLDRLATVLADTRGKVTVLGHTDDAPGPRDRMESNLALSTARATAVARHLQERGIA
HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCC
SDRLSIIGRGVKDPVGDNRTAAGRALNRRVEIILESVPTSQPTSPQQ
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8755894; 9665876 [H]