| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is lplT [H]
Identifier: 187929069
GI number: 187929069
Start: 2098466
End: 2100373
Strand: Reverse
Name: lplT [H]
Synonym: Rpic_1989
Alternate gene names: 187929069
Gene position: 2100373-2098466 (Counterclockwise)
Preceding gene: 187929070
Following gene: 187929068
Centisome position: 53.27
GC content: 63.0
Gene sequence:
>1908_bases ATGAGCCAATCGAGCCAGTTTTCCCTGCTGAAGCAGCTTCGCTTTGCACCGTTCTTCTGGACCCAGTTCCTGGGCGCGAT GAACGATAACGTTTTCAAGGTGGCGTTTTCCTCGTTGGTCACGTACCACGCTGCGCTGTTCGGCAATGCGGACCCGGCGT CCGCAGCGTTCCTGATTTCAGCGATCTTCATCGCGCCGTTTGTGCTGCTGTCTGCCACCAGCGGGCAGATTGCCGACCGC ATGGACAAGGCGCGCCTGATCCGTCTGGTGAAGACATTGGAAATCGCCATCATGGTGATCGGCTGTGCAGGTTTCGCGCT GCGCCACGTTGAACTGCTGTACCTCTGCACGTTCTTGATGGGCGTGCACTCGACGCTGTTTGGGCCCGTGAAGTACGCCT ATCTGCCCCAGCATCTGCAATCGGCTGAATTGGTGGGCGGCAACGGGCTGGTGGAAATGGGCACCTTTGTCGCCATCCTG ATCGGCACCATTGGCGGCGGCGAACTGGCCAATTACACCCGCAACGGCGAGCTGGTCGGCCCGCTGTTTACCGGTATTGC GTGCATTGTCATTGCCGTGGCCGGGTGGCTGACCGCGCGCGGTGTGCCCGTCTCGCCGGCGTCGCAGCCGGACCTGCGCA TCAATTGGAACCCGATCTCCGAGACCTGGCGCAACCTGAAGCTGGCGAGCAACCAGCGCGCGGTGTTTCTCAGCCTGCTG GGCATCTCGTGGCTCTGGTTCGTGGGCGCGACGTTCCTGACGTCGTTCTTTGCCTACGCGCGCAATGTGCTCGGCGGCGA CCAGAATGTCGTGACGCTACTGCTGGCCGTGTTTTCGGTGGGCATCGGGTTGGGCTCGGTGCTGTGCGAAAAGCTCTCGG GCCGCACGGTGGAGATCGGCCTGGTGCCGTTTGGCTCGATCGGCATGACGGTCTTCGCGGTGGACCTGTACTTTGCTTCG CATGCCGAGGCATTGGTCGCGCACGACGTGCTGACGGGCATTTCCGGGTTCCTGCAGAACCATCGCCATTGGCGCGTGCT GGCCGATCTGTTCCTGCTGGCGATGTTCGGCGGCTTCTACAGCGTGCCCTTGTACGCGCTGATCCAGAGCCGCTGCGAAC CGACGCATCGTGCGCGCATCATTGCCGCCAACAACATCCTCAACGCGCTGTTCATGATCGCTTCTGCCGTGCTGGCGATG GTGCTCACGCGTGCCGGGTTCACGATCCCGCAGTTATTTCTGGTCACCGGCATCCTCAATGCCGTGGTGGCGATCTACAT CTACACGCTGGTGCCGGAATTCCTGATCCGCTTCGTGATGTGGCTGCTGATCCATACCGTTTACCGCGTGAAGGTGGAGG GCTCGGAGCAGATTCCCGATGAAGGCCCCTGCCTGCTGGTCTGCAACCACGTGAGCTTCGTCGATGCCGTGGTGGTGGGC GCGTTCGTGCGCCGCCCCGTGCGTTTTGTGATGGATCACCGCATCTTCAAGGTGCCGGTGCTGTCGTGGTTCTTCAGCAC GGTCAAGGCGATTCCGATTGCGCCGATGCACGAAGACCCGGAGATGCTCAGCCGCGCCTACGACACCATTGCCGCCGCGC TGGCGGAGGGCGAGGTCGTCTGCATCTTCCCCGAAGGCAAGATCACCGGCACGGGCGAGATGAACCCGTTCAAGGAAGGC ATGCGCCGCATCATCGAACGCACACCCGTGCCGGTGGTACCGATGGCGCTGCGCGGCCTCTGGGGCAGCTTTTTCTCGCG CAAGGGCGGGGCGGCGATGTCGCGCCCGTTCCGTCGCGGCTTCCTCAACAAGCTGGAACTGTGCATCGGCACGCCGGTGC CGGCGCAGGCCGTGTCGCTGGAAGCGATGCAGGCCGCCGTGCTGGCGTTGCGCGGCGAGCGGCTCTAG
Upstream 100 bases:
>100_bases AAGGCCAACGAAGACTGACCTGCGCGATCTCCTCACCGCATCCCTGAAACCCGCCCGCCGTTGCGAGCGGGTTTTTTGTT GAACCCAGAACCGCCTGCCG
Downstream 100 bases:
>100_bases CGCCTGGCGCCCCTGCGGACTTCGATACACTGCCGGTCGGCCTGCAATCGGCCTTCATGCGTTTTTTCTGACCTCCAACT TTCCCGTTACCTGCCATGAA
Product: phospholipid/glycerol acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 635; Mature: 634
Protein sequence:
>635_residues MSQSSQFSLLKQLRFAPFFWTQFLGAMNDNVFKVAFSSLVTYHAALFGNADPASAAFLISAIFIAPFVLLSATSGQIADR MDKARLIRLVKTLEIAIMVIGCAGFALRHVELLYLCTFLMGVHSTLFGPVKYAYLPQHLQSAELVGGNGLVEMGTFVAIL IGTIGGGELANYTRNGELVGPLFTGIACIVIAVAGWLTARGVPVSPASQPDLRINWNPISETWRNLKLASNQRAVFLSLL GISWLWFVGATFLTSFFAYARNVLGGDQNVVTLLLAVFSVGIGLGSVLCEKLSGRTVEIGLVPFGSIGMTVFAVDLYFAS HAEALVAHDVLTGISGFLQNHRHWRVLADLFLLAMFGGFYSVPLYALIQSRCEPTHRARIIAANNILNALFMIASAVLAM VLTRAGFTIPQLFLVTGILNAVVAIYIYTLVPEFLIRFVMWLLIHTVYRVKVEGSEQIPDEGPCLLVCNHVSFVDAVVVG AFVRRPVRFVMDHRIFKVPVLSWFFSTVKAIPIAPMHEDPEMLSRAYDTIAAALAEGEVVCIFPEGKITGTGEMNPFKEG MRRIIERTPVPVVPMALRGLWGSFFSRKGGAAMSRPFRRGFLNKLELCIGTPVPAQAVSLEAMQAAVLALRGERL
Sequences:
>Translated_635_residues MSQSSQFSLLKQLRFAPFFWTQFLGAMNDNVFKVAFSSLVTYHAALFGNADPASAAFLISAIFIAPFVLLSATSGQIADR MDKARLIRLVKTLEIAIMVIGCAGFALRHVELLYLCTFLMGVHSTLFGPVKYAYLPQHLQSAELVGGNGLVEMGTFVAIL IGTIGGGELANYTRNGELVGPLFTGIACIVIAVAGWLTARGVPVSPASQPDLRINWNPISETWRNLKLASNQRAVFLSLL GISWLWFVGATFLTSFFAYARNVLGGDQNVVTLLLAVFSVGIGLGSVLCEKLSGRTVEIGLVPFGSIGMTVFAVDLYFAS HAEALVAHDVLTGISGFLQNHRHWRVLADLFLLAMFGGFYSVPLYALIQSRCEPTHRARIIAANNILNALFMIASAVLAM VLTRAGFTIPQLFLVTGILNAVVAIYIYTLVPEFLIRFVMWLLIHTVYRVKVEGSEQIPDEGPCLLVCNHVSFVDAVVVG AFVRRPVRFVMDHRIFKVPVLSWFFSTVKAIPIAPMHEDPEMLSRAYDTIAAALAEGEVVCIFPEGKITGTGEMNPFKEG MRRIIERTPVPVVPMALRGLWGSFFSRKGGAAMSRPFRRGFLNKLELCIGTPVPAQAVSLEAMQAAVLALRGERL >Mature_634_residues SQSSQFSLLKQLRFAPFFWTQFLGAMNDNVFKVAFSSLVTYHAALFGNADPASAAFLISAIFIAPFVLLSATSGQIADRM DKARLIRLVKTLEIAIMVIGCAGFALRHVELLYLCTFLMGVHSTLFGPVKYAYLPQHLQSAELVGGNGLVEMGTFVAILI GTIGGGELANYTRNGELVGPLFTGIACIVIAVAGWLTARGVPVSPASQPDLRINWNPISETWRNLKLASNQRAVFLSLLG ISWLWFVGATFLTSFFAYARNVLGGDQNVVTLLLAVFSVGIGLGSVLCEKLSGRTVEIGLVPFGSIGMTVFAVDLYFASH AEALVAHDVLTGISGFLQNHRHWRVLADLFLLAMFGGFYSVPLYALIQSRCEPTHRARIIAANNILNALFMIASAVLAMV LTRAGFTIPQLFLVTGILNAVVAIYIYTLVPEFLIRFVMWLLIHTVYRVKVEGSEQIPDEGPCLLVCNHVSFVDAVVVGA FVRRPVRFVMDHRIFKVPVLSWFFSTVKAIPIAPMHEDPEMLSRAYDTIAAALAEGEVVCIFPEGKITGTGEMNPFKEGM RRIIERTPVPVVPMALRGLWGSFFSRKGGAAMSRPFRRGFLNKLELCIGTPVPAQAVSLEAMQAAVLALRGERL
Specific function: Catalyzes the facilitated diffusion of 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) into the cell [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. LplT (TC 2.A.1.42) family [H]
Homologues:
Organism=Escherichia coli, GI1789200, Length=377, Percent_Identity=26.2599469496021, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1789201, Length=157, Percent_Identity=29.9363057324841, Blast_Score=66, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 69331; Mature: 69200
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSSQFSLLKQLRFAPFFWTQFLGAMNDNVFKVAFSSLVTYHAALFGNADPASAAFLIS CCCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH AIFIAPFVLLSATSGQIADRMDKARLIRLVKTLEIAIMVIGCAGFALRHVELLYLCTFLM HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVHSTLFGPVKYAYLPQHLQSAELVGGNGLVEMGTFVAILIGTIGGGELANYTRNGELVG HHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHH PLFTGIACIVIAVAGWLTARGVPVSPASQPDLRINWNPISETWRNLKLASNQRAVFLSLL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHCCCCCCCCHHHHHHHH GISWLWFVGATFLTSFFAYARNVLGGDQNVVTLLLAVFSVGIGLGSVLCEKLSGRTVEIG HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE LVPFGSIGMTVFAVDLYFASHAEALVAHDVLTGISGFLQNHRHWRVLADLFLLAMFGGFY EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH SVPLYALIQSRCEPTHRARIIAANNILNALFMIASAVLAMVLTRAGFTIPQLFLVTGILN HHHHHHHHHHHCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH AVVAIYIYTLVPEFLIRFVMWLLIHTVYRVKVEGSEQIPDEGPCLLVCNHVSFVDAVVVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEECCHHHHHHHHHH AFVRRPVRFVMDHRIFKVPVLSWFFSTVKAIPIAPMHEDPEMLSRAYDTIAAALAEGEVV HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEE CIFPEGKITGTGEMNPFKEGMRRIIERTPVPVVPMALRGLWGSFFSRKGGAAMSRPFRRG EEECCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHCCHHHHH FLNKLELCIGTPVPAQAVSLEAMQAAVLALRGERL HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SQSSQFSLLKQLRFAPFFWTQFLGAMNDNVFKVAFSSLVTYHAALFGNADPASAAFLIS CCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH AIFIAPFVLLSATSGQIADRMDKARLIRLVKTLEIAIMVIGCAGFALRHVELLYLCTFLM HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVHSTLFGPVKYAYLPQHLQSAELVGGNGLVEMGTFVAILIGTIGGGELANYTRNGELVG HHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHH PLFTGIACIVIAVAGWLTARGVPVSPASQPDLRINWNPISETWRNLKLASNQRAVFLSLL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHCCCCCCCCHHHHHHHH GISWLWFVGATFLTSFFAYARNVLGGDQNVVTLLLAVFSVGIGLGSVLCEKLSGRTVEIG HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE LVPFGSIGMTVFAVDLYFASHAEALVAHDVLTGISGFLQNHRHWRVLADLFLLAMFGGFY EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH SVPLYALIQSRCEPTHRARIIAANNILNALFMIASAVLAMVLTRAGFTIPQLFLVTGILN HHHHHHHHHHHCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH AVVAIYIYTLVPEFLIRFVMWLLIHTVYRVKVEGSEQIPDEGPCLLVCNHVSFVDAVVVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEECCHHHHHHHHHH AFVRRPVRFVMDHRIFKVPVLSWFFSTVKAIPIAPMHEDPEMLSRAYDTIAAALAEGEVV HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEE CIFPEGKITGTGEMNPFKEGMRRIIERTPVPVVPMALRGLWGSFFSRKGGAAMSRPFRRG EEECCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHCCHHHHH FLNKLELCIGTPVPAQAVSLEAMQAAVLALRGERL HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA