Click here to switch to the map view.

The map label for this gene is 187929025

Identifier: 187929025

GI number: 187929025

Start: 2051682

End: 2052254

Strand: Reverse

Name: 187929025

Synonym: Rpic_1945

Alternate gene names: NA

Gene position: 2052254-2051682 (Counterclockwise)

Preceding gene: 187929026

Following gene: 187929024

Centisome position: 52.05

GC content: 61.95

Gene sequence:

>573_bases
ATGACGACGTGCGTGGTGGTCAAGAAAGACGGCGAAGTGGCGATTGCGGCCGATTCGCTGGTGACGTTCGGCGATACGCG
CCTGGCGCGTGGCTACGAGCAGAACCAGAAGATCTTCCAGGTGGGCGATTCGCTGATCGCGCTGGCGGGCACGACGGCCC
ACTTCCCGGTCATGCGGAGTCTGTTAGCGGGTCTGGCCGATGAGTGTCGCCTCGGCACGCGTGACGACGTCTTCCGGACC
TTCCTCAAGGTGCACGAAAAGCTCAAGGACGAGTATTTCGTCAACACCAAGGAGGACGACGACGACCCGTACGAGTCGTC
GCAGATCACCTGCCTGATCGCCAACGCCACCGGCATCTACGGCGTCTATTCGTACCGCGAGGTGTTTTCGTTCGACCGCT
TCTGGGGCATTGGCTCGGGGCGCAATTTTGCGCTGGGAGCCATGTCGGCGGTGTTTGACATGCCGGGCAAGTCGGCGGCG
GACGTTGCACAGGTGGGCGTGTCCGCAGGCGTGGAATTCGACAAGAGCTCGGGCGGTCCGATCGAAGTGCACACAGTACG
TCTGCAGGATTGA

Upstream 100 bases:

>100_bases
CGCGGGCGCGGCACGCATCTGGCTTCGGGCCTGTGCGTGCCGGCCCGGTTGGGTTTGCAGCGGTCGGCGGACTGGTCAGT
GGATTGATGGCGAGGACGAC

Downstream 100 bases:

>100_bases
AAAGCGTCAGCGGGCCCGGGCGATGCCGGGTGCCGACGACAAGAACAAGGAGTCAGGAATGAGCGTGGTGGAAATCAAGG
TGCCGGACATCGGCGATTTC

Product: 20S proteasome subunits A and B

Products: NA

Alternate protein names: ATP-Dependent Protease HslVU Peptidase Subunit; Hydrolase Proteasome Hslv Type Peptidase Domain; ATP-Dependent Protease Peptidase Subunit

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MTTCVVVKKDGEVAIAADSLVTFGDTRLARGYEQNQKIFQVGDSLIALAGTTAHFPVMRSLLAGLADECRLGTRDDVFRT
FLKVHEKLKDEYFVNTKEDDDDPYESSQITCLIANATGIYGVYSYREVFSFDRFWGIGSGRNFALGAMSAVFDMPGKSAA
DVAQVGVSAGVEFDKSSGGPIEVHTVRLQD

Sequences:

>Translated_190_residues
MTTCVVVKKDGEVAIAADSLVTFGDTRLARGYEQNQKIFQVGDSLIALAGTTAHFPVMRSLLAGLADECRLGTRDDVFRT
FLKVHEKLKDEYFVNTKEDDDDPYESSQITCLIANATGIYGVYSYREVFSFDRFWGIGSGRNFALGAMSAVFDMPGKSAA
DVAQVGVSAGVEFDKSSGGPIEVHTVRLQD
>Mature_189_residues
TTCVVVKKDGEVAIAADSLVTFGDTRLARGYEQNQKIFQVGDSLIALAGTTAHFPVMRSLLAGLADECRLGTRDDVFRTF
LKVHEKLKDEYFVNTKEDDDDPYESSQITCLIANATGIYGVYSYREVFSFDRFWGIGSGRNFALGAMSAVFDMPGKSAAD
VAQVGVSAGVEFDKSSGGPIEVHTVRLQD

Specific function: Unknown

COG id: COG5405

COG function: function code O; ATP-dependent protease HslVU (ClpYQ), peptidase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20683; Mature: 20552

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTCVVVKKDGEVAIAADSLVTFGDTRLARGYEQNQKIFQVGDSLIALAGTTAHFPVMRS
CCEEEEEECCCCEEEEECCEEECCCHHHHCCCHHCCHHHHHCCCEEEECCCCHHHHHHHH
LLAGLADECRLGTRDDVFRTFLKVHEKLKDEYFVNTKEDDDDPYESSQITCLIANATGIY
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEEEECCCCCC
GVYSYREVFSFDRFWGIGSGRNFALGAMSAVFDMPGKSAADVAQVGVSAGVEFDKSSGGP
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCEECCCCCCC
IEVHTVRLQD
EEEEEEEECC
>Mature Secondary Structure 
TTCVVVKKDGEVAIAADSLVTFGDTRLARGYEQNQKIFQVGDSLIALAGTTAHFPVMRS
CEEEEEECCCCEEEEECCEEECCCHHHHCCCHHCCHHHHHCCCEEEECCCCHHHHHHHH
LLAGLADECRLGTRDDVFRTFLKVHEKLKDEYFVNTKEDDDDPYESSQITCLIANATGIY
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEEEECCCCCC
GVYSYREVFSFDRFWGIGSGRNFALGAMSAVFDMPGKSAADVAQVGVSAGVEFDKSSGGP
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCEECCCCCCC
IEVHTVRLQD
EEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA