| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is yhcG [H]
Identifier: 187928987
GI number: 187928987
Start: 2011099
End: 2012160
Strand: Direct
Name: yhcG [H]
Synonym: Rpic_1907
Alternate gene names: 187928987
Gene position: 2011099-2012160 (Clockwise)
Preceding gene: 187928986
Following gene: 187928997
Centisome position: 51.01
GC content: 58.57
Gene sequence:
>1062_bases ATGGCGACCCGCCCGCCTGCCCGCAGAAAACTCGCACCGGTGGTGCGAGAAACGGTAGATGCGCAGGATTACGCCGCCTT GCTCACCGAGATCAGGGCGCGCATCCAGGCTGCGCAATATGCGGCCCTACGGGCGGTCAACAAAGAGCTGGTGGGACTGT ATTGGGACATCGGCCAAATGATCGTGGCGCGGCAGCAAACCGAGGGTTGGGGTAAAGCGGTCGTGCAGCAACTCGCCACA GACCTGCAGGCGAGCTTTCCTGGCACGGGCGGTTTTTCGGCATCCAACCTCTGGCGGATGAAGGGTTTCTTTGAGACCTA CCGCGACGCAACAAAACTCGCACCTCTGGTGCGAGAAATCGGGTGGAGCCATAACCTGCTCATTCTTGAGCGTTGCAAAG ACGCTCAAGAGCGCGAGTTCTACCTGCGCATGACGCGCAAATTCGGTTGGTCGAAAAGCGTTCTGGCACACCAGATCGAC AACCAGAGCTACGAAAAGTCACTCCTGGGCCAGACCAATTTCGACAAGGCGCTGACGCCGGCCCTGCGCGCGCAAGCCAA GCTGGCGGTCAGAGACGAATACGCCTTCGATTTTCTCGAACTCGGCAACCAGCACAGCGAACGGGAGCTGGAGCGCGCGC TGATCACCCGCATCGAAGATTTTCTGCGCGCAATGGGCGGCATGTTTGCCTTCCTGGGTAGCCAATACCGGCTTGAAGTG GATGGCGACGAGTATTTCATCGATCTGCTGCTGTTCCACCGCCGCTTGCGCTCGCTGGTGGCCATCGAACTGAAAATCGG CAAATTCGAACCCGAGTTTGTCGGGAAGATGCAGTTCTACCTGGCCGCTCTGGACGAGCAGGTTCGCCAGGACGACGAGA ACCCGTCCATCGGCATCATCCTGTGCAAAGAAAAGAAGCGCACCATCGTCGAATATGCACTTCGCGACGCAACGAAGCCG ATTGGCGTAGCGACTTACGCCATCACCAAGAGTCTGCCCAAGGAGTTACAGGGCCAGTTGCCTTCGCCTGAAACCATTGC GCGCCTGCTTGAAACGCTGTAG
Upstream 100 bases:
>100_bases GTTCCGCGCCAAGCCCATCGTGCAGGCACAGGCCGACGTGGCGTTCAACGTTGTCGGCCTGGATGGCTTGTTGAATCTGT TTCCGCAGCAATAAGCCGCG
Downstream 100 bases:
>100_bases CCACGACGATTGAAAACGGGGCGCCACGATCAACTCGCACGCCCCGCCATCACCGCCGCCTGAAGCTTGAAAGGTCAAGC CCGCAGGTGCGCCTCCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MATRPPARRKLAPVVRETVDAQDYAALLTEIRARIQAAQYAALRAVNKELVGLYWDIGQMIVARQQTEGWGKAVVQQLAT DLQASFPGTGGFSASNLWRMKGFFETYRDATKLAPLVREIGWSHNLLILERCKDAQEREFYLRMTRKFGWSKSVLAHQID NQSYEKSLLGQTNFDKALTPALRAQAKLAVRDEYAFDFLELGNQHSERELERALITRIEDFLRAMGGMFAFLGSQYRLEV DGDEYFIDLLLFHRRLRSLVAIELKIGKFEPEFVGKMQFYLAALDEQVRQDDENPSIGIILCKEKKRTIVEYALRDATKP IGVATYAITKSLPKELQGQLPSPETIARLLETL
Sequences:
>Translated_353_residues MATRPPARRKLAPVVRETVDAQDYAALLTEIRARIQAAQYAALRAVNKELVGLYWDIGQMIVARQQTEGWGKAVVQQLAT DLQASFPGTGGFSASNLWRMKGFFETYRDATKLAPLVREIGWSHNLLILERCKDAQEREFYLRMTRKFGWSKSVLAHQID NQSYEKSLLGQTNFDKALTPALRAQAKLAVRDEYAFDFLELGNQHSERELERALITRIEDFLRAMGGMFAFLGSQYRLEV DGDEYFIDLLLFHRRLRSLVAIELKIGKFEPEFVGKMQFYLAALDEQVRQDDENPSIGIILCKEKKRTIVEYALRDATKP IGVATYAITKSLPKELQGQLPSPETIARLLETL >Mature_352_residues ATRPPARRKLAPVVRETVDAQDYAALLTEIRARIQAAQYAALRAVNKELVGLYWDIGQMIVARQQTEGWGKAVVQQLATD LQASFPGTGGFSASNLWRMKGFFETYRDATKLAPLVREIGWSHNLLILERCKDAQEREFYLRMTRKFGWSKSVLAHQIDN QSYEKSLLGQTNFDKALTPALRAQAKLAVRDEYAFDFLELGNQHSERELERALITRIEDFLRAMGGMFAFLGSQYRLEVD GDEYFIDLLLFHRRLRSLVAIELKIGKFEPEFVGKMQFYLAALDEQVRQDDENPSIGIILCKEKKRTIVEYALRDATKPI GVATYAITKSLPKELQGQLPSPETIARLLETL
Specific function: Unknown
COG id: COG4804
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789614, Length=339, Percent_Identity=31.858407079646, Blast_Score=154, Evalue=1e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009362 [H]
Pfam domain/function: PF06250 DUF1016 [H]
EC number: NA
Molecular weight: Translated: 40270; Mature: 40139
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRPPARRKLAPVVRETVDAQDYAALLTEIRARIQAAQYAALRAVNKELVGLYWDIGQM CCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVARQQTEGWGKAVVQQLATDLQASFPGTGGFSASNLWRMKGFFETYRDATKLAPLVREI HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GWSHNLLILERCKDAQEREFYLRMTRKFGWSKSVLAHQIDNQSYEKSLLGQTNFDKALTP CCCCCEEHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHCCCCCCHHHHHH ALRAQAKLAVRDEYAFDFLELGNQHSERELERALITRIEDFLRAMGGMFAFLGSQYRLEV HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE DGDEYFIDLLLFHRRLRSLVAIELKIGKFEPEFVGKMQFYLAALDEQVRQDDENPSIGII CCHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE LCKEKKRTIVEYALRDATKPIGVATYAITKSLPKELQGQLPSPETIARLLETL EECCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHC >Mature Secondary Structure ATRPPARRKLAPVVRETVDAQDYAALLTEIRARIQAAQYAALRAVNKELVGLYWDIGQM CCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVARQQTEGWGKAVVQQLATDLQASFPGTGGFSASNLWRMKGFFETYRDATKLAPLVREI HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GWSHNLLILERCKDAQEREFYLRMTRKFGWSKSVLAHQIDNQSYEKSLLGQTNFDKALTP CCCCCEEHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHCCCCCCHHHHHH ALRAQAKLAVRDEYAFDFLELGNQHSERELERALITRIEDFLRAMGGMFAFLGSQYRLEV HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE DGDEYFIDLLLFHRRLRSLVAIELKIGKFEPEFVGKMQFYLAALDEQVRQDDENPSIGII CCHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE LCKEKKRTIVEYALRDATKPIGVATYAITKSLPKELQGQLPSPETIARLLETL EECCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]