| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is serB [C]
Identifier: 187928986
GI number: 187928986
Start: 2010160
End: 2011092
Strand: Direct
Name: serB [C]
Synonym: Rpic_1906
Alternate gene names: 187928986
Gene position: 2010160-2011092 (Clockwise)
Preceding gene: 187928985
Following gene: 187928987
Centisome position: 50.99
GC content: 63.34
Gene sequence:
>933_bases ATGCCGCCCGGGGCGTTCGCTACAATAGCGGGCTTCCCCGGCGCCGAACCGCCCGCTCCCCGCTCCTTTCACCCCATGCC CGTCATTCTGCAAAGCCCGTCGCCGCTGTCCACCGGTGACATTGAATCCGTCCGAAGCCTGTTCGGCAGCGCCACCTATG AGATGCGCGCGCCCAACGTCGCGGCCATCGAATGGGTGCACGAACTGCCCAGCGAATTACGCGTCCAGCTTGATGCCATC TGCGCCAACCTGAAGATGGACTACGCGTGGATTCCCGACGAATGGACGTTCGGCGATTTCCGCGTGCTGGCGATGGACAT GGATTCCACGCTCATCACCATCGAGTGCATCGACGAAATTGCGGATTTCTGCGGACTCAAGCCGCAAGTGGCGGCCATCA CCGAAGCGTCGATGCGGGGCGAGATCAAGGATTTCAACGAGAGCCTGACGCGCCGCGTCGAACTGCTCAAGGGCCTGGAT GCAAGCGTGCTGGAGCGCGTCTACGCCGAGCGCCTGCAGCTCTCCCTGGGCGCCGAAAAGATGCTCAAGGCCGTGCAGGC GCTGGGCATCCGTACGCTGCTGGTGTCGGGCGGCTTCGAATTTTTTACCTCACGCCTGCAGGAGCGCCTGGGCCTCGACC GTACGCGCGCCAACACGCTGGAGATCGTCGATGGCAAGCTGACCGGCCGCGTGCTCGGCGAGATCGTCAATGCGGATGTG AAGGCGCAGACGCTCAAGGCGTTCTGCCAGGATCTGGGCGTGTCGCCGCACAACGCCATTGCCATGGGCGACGGCTCGAA CGATCTGAAGATGATGGGCGTGGCGGGCCTGTCGGTCGCGTTCCGCGCCAAGCCCATCGTGCAGGCACAGGCCGACGTGG CGTTCAACGTTGTCGGCCTGGATGGCTTGTTGAATCTGTTTCCGCAGCAATAA
Upstream 100 bases:
>100_bases GCCTGCGACCGCTTCCTCGCCAAGGTGGCGCGCAGCCTGATGGTCGAGACCGCGTCCGCCTAACGCTTACACAGCAATGC CTCACCTTTTGGTGGGGCGC
Downstream 100 bases:
>100_bases GCCGCGATGGCGACCCGCCCGCCTGCCCGCAGAAAACTCGCACCGGTGGTGCGAGAAACGGTAGATGCGCAGGATTACGC CGCCTTGCTCACCGAGATCA
Product: phosphoserine phosphatase SerB
Products: NA
Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MPPGAFATIAGFPGAEPPAPRSFHPMPVILQSPSPLSTGDIESVRSLFGSATYEMRAPNVAAIEWVHELPSELRVQLDAI CANLKMDYAWIPDEWTFGDFRVLAMDMDSTLITIECIDEIADFCGLKPQVAAITEASMRGEIKDFNESLTRRVELLKGLD ASVLERVYAERLQLSLGAEKMLKAVQALGIRTLLVSGGFEFFTSRLQERLGLDRTRANTLEIVDGKLTGRVLGEIVNADV KAQTLKAFCQDLGVSPHNAIAMGDGSNDLKMMGVAGLSVAFRAKPIVQAQADVAFNVVGLDGLLNLFPQQ
Sequences:
>Translated_310_residues MPPGAFATIAGFPGAEPPAPRSFHPMPVILQSPSPLSTGDIESVRSLFGSATYEMRAPNVAAIEWVHELPSELRVQLDAI CANLKMDYAWIPDEWTFGDFRVLAMDMDSTLITIECIDEIADFCGLKPQVAAITEASMRGEIKDFNESLTRRVELLKGLD ASVLERVYAERLQLSLGAEKMLKAVQALGIRTLLVSGGFEFFTSRLQERLGLDRTRANTLEIVDGKLTGRVLGEIVNADV KAQTLKAFCQDLGVSPHNAIAMGDGSNDLKMMGVAGLSVAFRAKPIVQAQADVAFNVVGLDGLLNLFPQQ >Mature_309_residues PPGAFATIAGFPGAEPPAPRSFHPMPVILQSPSPLSTGDIESVRSLFGSATYEMRAPNVAAIEWVHELPSELRVQLDAIC ANLKMDYAWIPDEWTFGDFRVLAMDMDSTLITIECIDEIADFCGLKPQVAAITEASMRGEIKDFNESLTRRVELLKGLDA SVLERVYAERLQLSLGAEKMLKAVQALGIRTLLVSGGFEFFTSRLQERLGLDRTRANTLEIVDGKLTGRVLGEIVNADVK AQTLKAFCQDLGVSPHNAIAMGDGSNDLKMMGVAGLSVAFRAKPIVQAQADVAFNVVGLDGLLNLFPQQ
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Escherichia coli, GI1790849, Length=206, Percent_Identity=45.1456310679612, Blast_Score=167, Evalue=7e-43, Organism=Saccharomyces cerevisiae, GI6321647, Length=208, Percent_Identity=38.9423076923077, Blast_Score=142, Evalue=5e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR023190 - InterPro: IPR004469 [H]
Pfam domain/function: PF01842 ACT; PF00702 Hydrolase [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 33637; Mature: 33506
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPGAFATIAGFPGAEPPAPRSFHPMPVILQSPSPLSTGDIESVRSLFGSATYEMRAPNV CCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCEEECCCCH AAIEWVHELPSELRVQLDAICANLKMDYAWIPDEWTFGDFRVLAMDMDSTLITIECIDEI HHHHHHHHCHHHHHHHHHHHHHHCEECEEECCCCCCCCCEEEEEEECCCCEEHHHHHHHH ADFCGLKPQVAAITEASMRGEIKDFNESLTRRVELLKGLDASVLERVYAERLQLSLGAEK HHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHH MLKAVQALGIRTLLVSGGFEFFTSRLQERLGLDRTRANTLEIVDGKLTGRVLGEIVNADV HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHCCCEEEEECCHHHHHHHHHHHCCCH KAQTLKAFCQDLGVSPHNAIAMGDGSNDLKMMGVAGLSVAFRAKPIVQAQADVAFNVVGL HHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEECCCCHHHCCCCHHEECCCCEEEEECH DGLLNLFPQQ HHHHHHCCCC >Mature Secondary Structure PPGAFATIAGFPGAEPPAPRSFHPMPVILQSPSPLSTGDIESVRSLFGSATYEMRAPNV CCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCEEECCCCH AAIEWVHELPSELRVQLDAICANLKMDYAWIPDEWTFGDFRVLAMDMDSTLITIECIDEI HHHHHHHHCHHHHHHHHHHHHHHCEECEEECCCCCCCCCEEEEEEECCCCEEHHHHHHHH ADFCGLKPQVAAITEASMRGEIKDFNESLTRRVELLKGLDASVLERVYAERLQLSLGAEK HHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHH MLKAVQALGIRTLLVSGGFEFFTSRLQERLGLDRTRANTLEIVDGKLTGRVLGEIVNADV HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHCCCEEEEECCHHHHHHHHHHHCCCH KAQTLKAFCQDLGVSPHNAIAMGDGSNDLKMMGVAGLSVAFRAKPIVQAQADVAFNVVGL HHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEECCCCHHHCCCCHHEECCCCEEEEECH DGLLNLFPQQ HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]