| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928975
Identifier: 187928975
GI number: 187928975
Start: 1996850
End: 1998034
Strand: Reverse
Name: 187928975
Synonym: Rpic_1895
Alternate gene names: NA
Gene position: 1998034-1996850 (Counterclockwise)
Preceding gene: 187928976
Following gene: 187928973
Centisome position: 50.68
GC content: 64.73
Gene sequence:
>1185_bases ATGGAACGTCGCAATTTTCTGAAGGCCGGCGCCATGCTCGGCATGGGTGGCGCGGTGCCGGGGATTGTCTTTGCGCAAGG GCAAGACAAGCGCAAGGGCTACGGCAACCTGCTCATCCTCATCGAACTCAAGGGCGGCAATGACGGGCTGAACACCGTGG TGCCCTACACGAGCGCACAGTACTATGCGCTGCGCCCGCGCATCGCCATCAAGCGGGAGCAGGTGCTGCAACTGGATGAC CGCTACGGCCTGCATCCGTCTTTGCAGGCGATGATGCCGCTGTGGCAGGCGGGGGAATTGTCGGTGGTGCAGGGGCTGTC ATATCCGCAGCCGAATCTTTCGCACTTCCGCTCGATCGAGATCTGGGACACGGCGTCGCGCTCCGACCAATACCTGCGCG AAGGCTGGTTGACGCGTGCGTTTGCCGCACAGCCGGTGCCGCCATCGTTCGGTGCAGATGGCGTAATCATTGGCAGCGCC GATCTTGGCCCGCTCGACGGCGGCGCACGTGCCGTAGCGCTCGCCAATCCCGATGCGTTCCTCAACGAAGCCAAGCTGGC GATGCCTTCGCACGCGATGGGCAACGCCACACTCGCGCACGTGCTGAAGGTCGAGGCTGATATCGTCAAGGCGGCCGACG GACTGCGTCCGAAGTCCGGCAAGTTCGCGTTCCAGACGCATTTTCCGGACGGCGGGTTCGGTAACTCGATCAAGGCGGCG ATGCAGGTGGTGGCAGCACCGGGCCGTGGCGGTGCGGACGTCGCCGTGGTGTGCCTGTCGCTCGGTAGCTTTGATACGCA TACCAATCAGCAAGGCACGCAGGCGAACCTGCTGCGGCAGTTGGGCGAGGGCATCGCTTCGCTCAAGAGCGCGTTGACCG AGTTGGGCCGCTGGAACGACACGCTGATCGTCACGTATTCGGAGTTTGGCCGCCGCCCGCGCGAAAACATGAACAACGGT ACGGATCACGGCACGGCTGCCGCGCATTTCGTGGCCGGTGGCCGCGTCAAGGGCGGGCTGGCCGGGCAGGGGCCGGTGCT GGAACGCCTGGACGGCGGCGGCAATCTCGACCCGTCGGTCGATTTCCGCTCGCTTTATGCCACGGTGCTGGAGCGCTGGT GGGGGATGGATTCGCAGCCGGTGCTGGCAGGGCGGTTTGCGCCGCTGGATCTGATCAAAGCCTGA
Upstream 100 bases:
>100_bases CCGATTCCCGTCAAGCTGGCCGGTACGGCGTACCTGCGCACGCTGATGATGGACCCGGCTTACCAGTTGAAGTAACGCCA CCGCCGCAGGAGCACACATC
Downstream 100 bases:
>100_bases TCAACCGCGGATCTGCGTCTTCCAGGCCAGCCAGAGCTTGCGCAGCGGCGTCAGGTCCGTACGCTGCGTGAGCACCTGGA AGCCGTCGGCTTCCACCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MERRNFLKAGAMLGMGGAVPGIVFAQGQDKRKGYGNLLILIELKGGNDGLNTVVPYTSAQYYALRPRIAIKREQVLQLDD RYGLHPSLQAMMPLWQAGELSVVQGLSYPQPNLSHFRSIEIWDTASRSDQYLREGWLTRAFAAQPVPPSFGADGVIIGSA DLGPLDGGARAVALANPDAFLNEAKLAMPSHAMGNATLAHVLKVEADIVKAADGLRPKSGKFAFQTHFPDGGFGNSIKAA MQVVAAPGRGGADVAVVCLSLGSFDTHTNQQGTQANLLRQLGEGIASLKSALTELGRWNDTLIVTYSEFGRRPRENMNNG TDHGTAAAHFVAGGRVKGGLAGQGPVLERLDGGGNLDPSVDFRSLYATVLERWWGMDSQPVLAGRFAPLDLIKA
Sequences:
>Translated_394_residues MERRNFLKAGAMLGMGGAVPGIVFAQGQDKRKGYGNLLILIELKGGNDGLNTVVPYTSAQYYALRPRIAIKREQVLQLDD RYGLHPSLQAMMPLWQAGELSVVQGLSYPQPNLSHFRSIEIWDTASRSDQYLREGWLTRAFAAQPVPPSFGADGVIIGSA DLGPLDGGARAVALANPDAFLNEAKLAMPSHAMGNATLAHVLKVEADIVKAADGLRPKSGKFAFQTHFPDGGFGNSIKAA MQVVAAPGRGGADVAVVCLSLGSFDTHTNQQGTQANLLRQLGEGIASLKSALTELGRWNDTLIVTYSEFGRRPRENMNNG TDHGTAAAHFVAGGRVKGGLAGQGPVLERLDGGGNLDPSVDFRSLYATVLERWWGMDSQPVLAGRFAPLDLIKA >Mature_394_residues MERRNFLKAGAMLGMGGAVPGIVFAQGQDKRKGYGNLLILIELKGGNDGLNTVVPYTSAQYYALRPRIAIKREQVLQLDD RYGLHPSLQAMMPLWQAGELSVVQGLSYPQPNLSHFRSIEIWDTASRSDQYLREGWLTRAFAAQPVPPSFGADGVIIGSA DLGPLDGGARAVALANPDAFLNEAKLAMPSHAMGNATLAHVLKVEADIVKAADGLRPKSGKFAFQTHFPDGGFGNSIKAA MQVVAAPGRGGADVAVVCLSLGSFDTHTNQQGTQANLLRQLGEGIASLKSALTELGRWNDTLIVTYSEFGRRPRENMNNG TDHGTAAAHFVAGGRVKGGLAGQGPVLERLDGGGNLDPSVDFRSLYATVLERWWGMDSQPVLAGRFAPLDLIKA
Specific function: Unknown
COG id: COG4102
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42029; Mature: 42029
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERRNFLKAGAMLGMGGAVPGIVFAQGQDKRKGYGNLLILIELKGGNDGLNTVVPYTSAQ CCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCEECCCCCE YYALRPRIAIKREQVLQLDDRYGLHPSLQAMMPLWQAGELSVVQGLSYPQPNLSHFRSIE EEEECCCHHCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCHHHCEEEE IWDTASRSDQYLREGWLTRAFAAQPVPPSFGADGVIIGSADLGPLDGGARAVALANPDAF EECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCHHH LNEAKLAMPSHAMGNATLAHVLKVEADIVKAADGLRPKSGKFAFQTHFPDGGFGNSIKAA HCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHH MQVVAAPGRGGADVAVVCLSLGSFDTHTNQQGTQANLLRQLGEGIASLKSALTELGRWND HHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC TLIVTYSEFGRRPRENMNNGTDHGTAAAHFVAGGRVKGGLAGQGPVLERLDGGGNLDPSV EEEEEEHHHCCCCHHHCCCCCCCCCHHHHEEECCCCCCCCCCCCCHHHHCCCCCCCCCCC DFRSLYATVLERWWGMDSQPVLAGRFAPLDLIKA HHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHCC >Mature Secondary Structure MERRNFLKAGAMLGMGGAVPGIVFAQGQDKRKGYGNLLILIELKGGNDGLNTVVPYTSAQ CCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCEECCCCCE YYALRPRIAIKREQVLQLDDRYGLHPSLQAMMPLWQAGELSVVQGLSYPQPNLSHFRSIE EEEECCCHHCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCHHHCEEEE IWDTASRSDQYLREGWLTRAFAAQPVPPSFGADGVIIGSADLGPLDGGARAVALANPDAF EECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCHHH LNEAKLAMPSHAMGNATLAHVLKVEADIVKAADGLRPKSGKFAFQTHFPDGGFGNSIKAA HCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHH MQVVAAPGRGGADVAVVCLSLGSFDTHTNQQGTQANLLRQLGEGIASLKSALTELGRWND HHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC TLIVTYSEFGRRPRENMNNGTDHGTAAAHFVAGGRVKGGLAGQGPVLERLDGGGNLDPSV EEEEEEHHHCCCCHHHCCCCCCCCCHHHHEEECCCCCCCCCCCCCHHHHCCCCCCCCCCC DFRSLYATVLERWWGMDSQPVLAGRFAPLDLIKA HHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA