Definition Ralstonia pickettii 12J chromosome chromosome 1, complete sequence.
Accession NC_010682
Length 3,942,557

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The map label for this gene is 187928976

Identifier: 187928976

GI number: 187928976

Start: 1998060

End: 1999685

Strand: Reverse

Name: 187928976

Synonym: Rpic_1896

Alternate gene names: NA

Gene position: 1999685-1998060 (Counterclockwise)

Preceding gene: 187928977

Following gene: 187928975

Centisome position: 50.72

GC content: 63.9

Gene sequence:

>1626_bases
ATGCGAATCCGTAGCACCACGATCTTCTTGGCGCTGGCAGCCGCCGGCGCGCTTTCACTGCAGACCGCGCATGCGGCAAC
GCAGGACAAGCCGCATCGCCACACCGCGCAAGCCAAGGCGCCAGCCGCCGACGAGCAGCGCCTGGACCGCGACGATGCAC
GCTATTTCCTCGCCCGCATCGGCTTTGCGCCTTCCGAGAGCGAACTCGACGCCTACGCCGGACTCACACACCGCGAAGCC
GTCGACCGCGTCCTTGCCCAGACGGGCACCGTTGCCACGCAAGCGCCCCCAGCGTGGGTGAACGAGCCGATCGTCCCCTA
CAACAAGCTACCCGACGAAGACGCCCGCAAGACGGCGCGCCAGAAGAATGCCGCGCACGAGCTGGAATTGCGTGCCTGGT
GGATGGGCGAGATGATCAAGACGCCGTCGCCGCTGACAGAGCGCATGACGCTGTTCTGGCACAACCATTTCGTTTCCAGT
TCGCAGAAGGTGCCGTTCGCGCAATTGATGTATCGGCAGAACGTGCTGCTGCGCCAGAACGCGGTGGGCAACTTCGGCAC
GATGCTGCACGCCATCGGCAAAGACCCGGCGATGCTGATCTATCTGGATGGCGCCGAGAGCCGCAAGGGCAAGCCGAATG
AGAATTTCGCGCGCGAGGTGATGGAGCTTTTCACGCTGGGTGAAGGCCATTACACCGAACAGGACATCAAGGAAGCCGCG
CGCACCTACACAGGCTGGAGCATCGACCGCGAGCACGATTTCACCTACATCTGGCGGCCGCAGATACACGACACGGGCGT
GAAGACTGTGTTTGGCCAGAGCGGCGATTACGACGGCGACCAGATGCTCGACATCCTGCTGTCTCGCCCAGAGACGGCAA
ACTTCATCGTCACCAAGCTCTGGCGCGAGTTTGTTTCGCCTGACGTGGACGCGGCCCAGGCGCTGCGCGTGGCCGATGCG
TTCCGGGCAAGTGGCTATGACATCAAGGTGGCGTTGCGCGGGGTGTTCCTGACGCCGGCGTTCTGGGCGCCGCAATCGCA
CGCGACGCTCGTGAAGTCCCCGGTGGAAATGATTGTCGGCACGCTCAAGCAGTTCAACGTGCAGTACACCGACCCGACGC
CGTTTGCCATCAAGTCTGCGCAGCTGGGGCAGAACCTACTGGCCCCGCCGAACGTGAAGGGCTGGCCCGGCGGCGATGCG
TGGATCAACTCAACCACGCTGCTGGGGCGCAAGCAGTTTCTCGACCAATTGTTCCGCTCGACCGAGATGAAGCCGCCGCC
CGGCACGCAACAGGCGCAACAGCAGAAGCCGGGCATGATGATGGCCGCAATGCGCGAAGACCTGAAGCAGGGTGGCACCG
TGCAGGGCCTGGGCCAGGCGCTCAAGGGCATGGGGCAGGAGGGGCGCTTCAAGCTTGCGCAGTCGCAGACGATGGTGTCG
TTCAACTCGGCCAAGTGGCTGGCGCAGTTCGGAGCGGATGGCGATGATCCGCCGCAACTGGCGCCGCGCATTTCGATCCA
GCGTGCCGTGTTGCCCATCGAGCCGACTGCGCCGATTCCCGTCAAGCTGGCCGGTACGGCGTACCTGCGCACGCTGATGA
TGGACCCGGCTTACCAGTTGAAGTAA

Upstream 100 bases:

>100_bases
ACGCGGGATATCTACCACCGTGGCGGCTAGGTAGGGGGCCGAGGAACGGCGCACGAGTCGCTGCCCCGGCAAAGCAGTAG
GGTCGTTTCGGGGGGCCGAC

Downstream 100 bases:

>100_bases
CGCCACCGCCGCAGGAGCACACATCATGGAACGTCGCAATTTTCTGAAGGCCGGCGCCATGCTCGGCATGGGTGGCGCGG
TGCCGGGGATTGTCTTTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MRIRSTTIFLALAAAGALSLQTAHAATQDKPHRHTAQAKAPAADEQRLDRDDARYFLARIGFAPSESELDAYAGLTHREA
VDRVLAQTGTVATQAPPAWVNEPIVPYNKLPDEDARKTARQKNAAHELELRAWWMGEMIKTPSPLTERMTLFWHNHFVSS
SQKVPFAQLMYRQNVLLRQNAVGNFGTMLHAIGKDPAMLIYLDGAESRKGKPNENFAREVMELFTLGEGHYTEQDIKEAA
RTYTGWSIDREHDFTYIWRPQIHDTGVKTVFGQSGDYDGDQMLDILLSRPETANFIVTKLWREFVSPDVDAAQALRVADA
FRASGYDIKVALRGVFLTPAFWAPQSHATLVKSPVEMIVGTLKQFNVQYTDPTPFAIKSAQLGQNLLAPPNVKGWPGGDA
WINSTTLLGRKQFLDQLFRSTEMKPPPGTQQAQQQKPGMMMAAMREDLKQGGTVQGLGQALKGMGQEGRFKLAQSQTMVS
FNSAKWLAQFGADGDDPPQLAPRISIQRAVLPIEPTAPIPVKLAGTAYLRTLMMDPAYQLK

Sequences:

>Translated_541_residues
MRIRSTTIFLALAAAGALSLQTAHAATQDKPHRHTAQAKAPAADEQRLDRDDARYFLARIGFAPSESELDAYAGLTHREA
VDRVLAQTGTVATQAPPAWVNEPIVPYNKLPDEDARKTARQKNAAHELELRAWWMGEMIKTPSPLTERMTLFWHNHFVSS
SQKVPFAQLMYRQNVLLRQNAVGNFGTMLHAIGKDPAMLIYLDGAESRKGKPNENFAREVMELFTLGEGHYTEQDIKEAA
RTYTGWSIDREHDFTYIWRPQIHDTGVKTVFGQSGDYDGDQMLDILLSRPETANFIVTKLWREFVSPDVDAAQALRVADA
FRASGYDIKVALRGVFLTPAFWAPQSHATLVKSPVEMIVGTLKQFNVQYTDPTPFAIKSAQLGQNLLAPPNVKGWPGGDA
WINSTTLLGRKQFLDQLFRSTEMKPPPGTQQAQQQKPGMMMAAMREDLKQGGTVQGLGQALKGMGQEGRFKLAQSQTMVS
FNSAKWLAQFGADGDDPPQLAPRISIQRAVLPIEPTAPIPVKLAGTAYLRTLMMDPAYQLK
>Mature_541_residues
MRIRSTTIFLALAAAGALSLQTAHAATQDKPHRHTAQAKAPAADEQRLDRDDARYFLARIGFAPSESELDAYAGLTHREA
VDRVLAQTGTVATQAPPAWVNEPIVPYNKLPDEDARKTARQKNAAHELELRAWWMGEMIKTPSPLTERMTLFWHNHFVSS
SQKVPFAQLMYRQNVLLRQNAVGNFGTMLHAIGKDPAMLIYLDGAESRKGKPNENFAREVMELFTLGEGHYTEQDIKEAA
RTYTGWSIDREHDFTYIWRPQIHDTGVKTVFGQSGDYDGDQMLDILLSRPETANFIVTKLWREFVSPDVDAAQALRVADA
FRASGYDIKVALRGVFLTPAFWAPQSHATLVKSPVEMIVGTLKQFNVQYTDPTPFAIKSAQLGQNLLAPPNVKGWPGGDA
WINSTTLLGRKQFLDQLFRSTEMKPPPGTQQAQQQKPGMMMAAMREDLKQGGTVQGLGQALKGMGQEGRFKLAQSQTMVS
FNSAKWLAQFGADGDDPPQLAPRISIQRAVLPIEPTAPIPVKLAGTAYLRTLMMDPAYQLK

Specific function: Unknown

COG id: COG5267

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60115; Mature: 60115

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRSTTIFLALAAAGALSLQTAHAATQDKPHRHTAQAKAPAADEQRLDRDDARYFLARI
CCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHCCHHHHHHHHHHH
GFAPSESELDAYAGLTHREAVDRVLAQTGTVATQAPPAWVNEPIVPYNKLPDEDARKTAR
CCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
QKNAAHELELRAWWMGEMIKTPSPLTERMTLFWHNHFVSSSQKVPFAQLMYRQNVLLRQN
HHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
AVGNFGTMLHAIGKDPAMLIYLDGAESRKGKPNENFAREVMELFTLGEGHYTEQDIKEAA
CCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
RTYTGWSIDREHDFTYIWRPQIHDTGVKTVFGQSGDYDGDQMLDILLSRPETANFIVTKL
HHHCCCCCCCCCCEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHH
WREFVSPDVDAAQALRVADAFRASGYDIKVALRGVFLTPAFWAPQSHATLVKSPVEMIVG
HHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHH
TLKQFNVQYTDPTPFAIKSAQLGQNLLAPPNVKGWPGGDAWINSTTLLGRKQFLDQLFRS
HHHHCEEEECCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
TEMKPPPGTQQAQQQKPGMMMAAMREDLKQGGTVQGLGQALKGMGQEGRFKLAQSQTMVS
CCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEECCCEEEE
FNSAKWLAQFGADGDDPPQLAPRISIQRAVLPIEPTAPIPVKLAGTAYLRTLMMDPAYQL
ECCHHHHHHHCCCCCCCCCCCCCCCHHEEEEECCCCCCCCEEECHHHHHHHHHHCCCCCC
K
C
>Mature Secondary Structure
MRIRSTTIFLALAAAGALSLQTAHAATQDKPHRHTAQAKAPAADEQRLDRDDARYFLARI
CCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHCCHHHHHHHHHHH
GFAPSESELDAYAGLTHREAVDRVLAQTGTVATQAPPAWVNEPIVPYNKLPDEDARKTAR
CCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
QKNAAHELELRAWWMGEMIKTPSPLTERMTLFWHNHFVSSSQKVPFAQLMYRQNVLLRQN
HHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
AVGNFGTMLHAIGKDPAMLIYLDGAESRKGKPNENFAREVMELFTLGEGHYTEQDIKEAA
CCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
RTYTGWSIDREHDFTYIWRPQIHDTGVKTVFGQSGDYDGDQMLDILLSRPETANFIVTKL
HHHCCCCCCCCCCEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHH
WREFVSPDVDAAQALRVADAFRASGYDIKVALRGVFLTPAFWAPQSHATLVKSPVEMIVG
HHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHH
TLKQFNVQYTDPTPFAIKSAQLGQNLLAPPNVKGWPGGDAWINSTTLLGRKQFLDQLFRS
HHHHCEEEECCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
TEMKPPPGTQQAQQQKPGMMMAAMREDLKQGGTVQGLGQALKGMGQEGRFKLAQSQTMVS
CCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEECCCEEEE
FNSAKWLAQFGADGDDPPQLAPRISIQRAVLPIEPTAPIPVKLAGTAYLRTLMMDPAYQL
ECCHHHHHHHCCCCCCCCCCCCCCCHHEEEEECCCCCCCCEEECHHHHHHHHHHCCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA