Definition Ralstonia pickettii 12J chromosome chromosome 1, complete sequence.
Accession NC_010682
Length 3,942,557

Click here to switch to the map view.

The map label for this gene is 187928872

Identifier: 187928872

GI number: 187928872

Start: 1884502

End: 1885158

Strand: Direct

Name: 187928872

Synonym: Rpic_1789

Alternate gene names: NA

Gene position: 1884502-1885158 (Clockwise)

Preceding gene: 187928871

Following gene: 187928873

Centisome position: 47.8

GC content: 64.84

Gene sequence:

>657_bases
GTGAGGGTTTCGGACGAGATCCGGGGTGAACGCAAGGCAGCCGTGCTGAGCGCCATGCAGAAGCTGCGAGATGCATTCCC
TTTGCAACAGGCCGTGGACGAGGCCAACCCCGTCCTGCGCACGACTTATGCCAAGGTGCTTTCGCACTGGGCTCTGCAGG
GCACACCACCCCCGCGAGATCTCGCTTCCAACGCGGCAATACAGGAACTGGTCGCGCTGGATGCGCTGATCATTGATGAG
TGCAGGATTGGCTGCTATCCGTTTAGCGCCCGCGATACGGGCATCCATGTCCACTTCTCTGGGCATCGCGTTGCGGCAAT
GTGTGCGATCGACGCCCTGGCGATCCCCCGCCTGGTGCGACACACGTCGCGCGTCACGGCTCGGTGCGCCGTATGTCGTT
GCCACCTTGAGTGCACGGTCGCGGCCAGCGGCAGCGTTGACGGAGGGAATCCGCAAGGCGTGCGTGTGGTCTGGCGTTCC
AGCGCGGTCGCCGAGGGAGCCTGTTGCCACATCCCATGCCCCGGCATCCGATTCGTCTGCAGGCAGTGTGCCGAACTGCC
CGGGGCGACGGGCCTCTCGCTTCCCGAAGCGGCCGCGGTGGGAAACGGTTTCTTCGCGTTCCAACGGCGATTGCTGCGCC
ACCATGGGCAACGCTGA

Upstream 100 bases:

>100_bases
CTGAACGAGCTGGCTTGCTGCGCCGACGAAGTTCGTGCCCCATCCTAGGCGGAGAGGCGTTGGCGATGATGACAACTGGA
TTGACCATATGAGGTGACGC

Downstream 100 bases:

>100_bases
CACCGGAAGAACGCTTTCCTCTGCGAACCGTGTTTCAAGTTCTACGTGCAGCAGGCGGTGAAATTGGGGGCGACCGAGCA
TGAAGTGGGCGAGGTGCTTG

Product: alkylmercury lyase

Products: NA

Alternate protein names: Organomercurial Lyase

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MRVSDEIRGERKAAVLSAMQKLRDAFPLQQAVDEANPVLRTTYAKVLSHWALQGTPPPRDLASNAAIQELVALDALIIDE
CRIGCYPFSARDTGIHVHFSGHRVAAMCAIDALAIPRLVRHTSRVTARCAVCRCHLECTVAASGSVDGGNPQGVRVVWRS
SAVAEGACCHIPCPGIRFVCRQCAELPGATGLSLPEAAAVGNGFFAFQRRLLRHHGQR

Sequences:

>Translated_218_residues
MRVSDEIRGERKAAVLSAMQKLRDAFPLQQAVDEANPVLRTTYAKVLSHWALQGTPPPRDLASNAAIQELVALDALIIDE
CRIGCYPFSARDTGIHVHFSGHRVAAMCAIDALAIPRLVRHTSRVTARCAVCRCHLECTVAASGSVDGGNPQGVRVVWRS
SAVAEGACCHIPCPGIRFVCRQCAELPGATGLSLPEAAAVGNGFFAFQRRLLRHHGQR
>Mature_218_residues
MRVSDEIRGERKAAVLSAMQKLRDAFPLQQAVDEANPVLRTTYAKVLSHWALQGTPPPRDLASNAAIQELVALDALIIDE
CRIGCYPFSARDTGIHVHFSGHRVAAMCAIDALAIPRLVRHTSRVTARCAVCRCHLECTVAASGSVDGGNPQGVRVVWRS
SAVAEGACCHIPCPGIRFVCRQCAELPGATGLSLPEAAAVGNGFFAFQRRLLRHHGQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23499; Mature: 23499

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVSDEIRGERKAAVLSAMQKLRDAFPLQQAVDEANPVLRTTYAKVLSHWALQGTPPPRD
CCCCHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHH
LASNAAIQELVALDALIIDECRIGCYPFSARDTGIHVHFSGHRVAAMCAIDALAIPRLVR
HHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHH
HTSRVTARCAVCRCHLECTVAASGSVDGGNPQGVRVVWRSSAVAEGACCHIPCPGIRFVC
HHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEECCCCHHHHHH
RQCAELPGATGLSLPEAAAVGNGFFAFQRRLLRHHGQR
HHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRVSDEIRGERKAAVLSAMQKLRDAFPLQQAVDEANPVLRTTYAKVLSHWALQGTPPPRD
CCCCHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHH
LASNAAIQELVALDALIIDECRIGCYPFSARDTGIHVHFSGHRVAAMCAIDALAIPRLVR
HHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHH
HTSRVTARCAVCRCHLECTVAASGSVDGGNPQGVRVVWRSSAVAEGACCHIPCPGIRFVC
HHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEECCCCHHHHHH
RQCAELPGATGLSLPEAAAVGNGFFAFQRRLLRHHGQR
HHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA