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The map label for this gene is yhfW [H]

Identifier: 187928828

GI number: 187928828

Start: 1839803

End: 1840969

Strand: Direct

Name: yhfW [H]

Synonym: Rpic_1745

Alternate gene names: 187928828

Gene position: 1839803-1840969 (Clockwise)

Preceding gene: 187928826

Following gene: 187928832

Centisome position: 46.67

GC content: 64.87

Gene sequence:

>1167_bases
ATGGGCTCGATCTCCATCTGGGCGGCCACGCGCCCGCGTCGGCCTCGACCGGCCCTTGAGGGCGACCTGCGCGTCGACGT
GGTGATCGTCGGTGCCGGCATCACGGGCCTGACCGCCGCCCTGCTGCTCGCAAAGACCGCCCGGTCGGTGGCGGCGATCG
AAGCCCGTGCCGTAGGCGCGGGTGATAGCGGCGGCTCCACCGGTAACCTGTATCAGACCGTCACCGGTGGCCTCGAAACG
CTGGCGGCTAAGTGCGAAGCGGACACCGCCCGCGCCGTCGTAGCGTCTCGCGGGGAAGCGATCGCCTGGATCGAGCAGCA
AGCGCAGGCGATGGGGCCGAGCAGCGGCTTCCGCCGCTGCCCGATGTACCAGTATCCGCTAAGCCCGGATGCCGAGCCGA
CCATACTGGGGGAGCTGAAGGCATTGCGCGCAGCAGGTCTGGACGCGCAGTTGGCCTCTGAGATGCCCCCCGGCTTGCCC
GCCGCAAAGGGCGCGGTGCTTCTGCTTTCGGCACAAGCGCAGTTCCATCCGATCGGCTATCTGCACGCCTTGGCCCTGCA
AGCCGAACACGCCGGCGCCCGCCTCTTCGAAAACTCCCCTGCCCTCGAGCTGGACCTGGAAGTCGGCGTCGTTCGCACAC
GGACCGGTACCGCCTTCGGCCACCATATTGTGCTGGCCACCCATTCCCCGCTGGGTTTTCACTTGGTGCAAGCCGGCATG
GCTGTGCGCCGCGAATATGGTTTGGCCTTCCACGAACAAGCCGTTCCGGCTGGCATCTTCTGGGCGCAGGCCCATCCCAG
GCTATCGGTCCGCGGATTGGAGGCAAACGGCAAGCATTACTTGCTTTGCATCGGTGAACACCACGAAACGGGAAGGCATG
ATGCAGCCGCGGCACTCTCTCAACTTGAACGGGCCGCGCAGGAATACCTGGCTGTCGGTTCACCCGTTCAGCGCTGGTCG
GCACAACACTTTCATTCTCCGGACGGCCTTCCCTACATCGGCCGGGACGAGTCAGGGGCTTTCATCGCCACTGGTTTCTC
CACCGACGGGCTGGTGTACGGCACAGTCGCGGCCCACATCATTACTGATCAGATCATCGGCGCGCAGAGCCGTTGGAGTT
CGCTGTACCTGGGGTCGCTTCAGAAAACGGAAAATATTGCACGCTAA

Upstream 100 bases:

>100_bases
GCGCACGCAAGCACCATGGCGTTGACCCGCGATGTCGGGAAGTCCTGGACGCCTGCGCCGATAACCTGTGCCGCCATGAA
ACTCGGTACAAGGAGGCATG

Downstream 100 bases:

>100_bases
GCCAGTCGGCACGGACGTCGGCTACCGAGCGGCAAAGGCCTGACCTATTTGGTGTGCCCGCTTGACTTCGTCGCTTTGCA
AGTAAATCGAGGTGGTGGCC

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MGSISIWAATRPRRPRPALEGDLRVDVVIVGAGITGLTAALLLAKTARSVAAIEARAVGAGDSGGSTGNLYQTVTGGLET
LAAKCEADTARAVVASRGEAIAWIEQQAQAMGPSSGFRRCPMYQYPLSPDAEPTILGELKALRAAGLDAQLASEMPPGLP
AAKGAVLLLSAQAQFHPIGYLHALALQAEHAGARLFENSPALELDLEVGVVRTRTGTAFGHHIVLATHSPLGFHLVQAGM
AVRREYGLAFHEQAVPAGIFWAQAHPRLSVRGLEANGKHYLLCIGEHHETGRHDAAAALSQLERAAQEYLAVGSPVQRWS
AQHFHSPDGLPYIGRDESGAFIATGFSTDGLVYGTVAAHIITDQIIGAQSRWSSLYLGSLQKTENIAR

Sequences:

>Translated_388_residues
MGSISIWAATRPRRPRPALEGDLRVDVVIVGAGITGLTAALLLAKTARSVAAIEARAVGAGDSGGSTGNLYQTVTGGLET
LAAKCEADTARAVVASRGEAIAWIEQQAQAMGPSSGFRRCPMYQYPLSPDAEPTILGELKALRAAGLDAQLASEMPPGLP
AAKGAVLLLSAQAQFHPIGYLHALALQAEHAGARLFENSPALELDLEVGVVRTRTGTAFGHHIVLATHSPLGFHLVQAGM
AVRREYGLAFHEQAVPAGIFWAQAHPRLSVRGLEANGKHYLLCIGEHHETGRHDAAAALSQLERAAQEYLAVGSPVQRWS
AQHFHSPDGLPYIGRDESGAFIATGFSTDGLVYGTVAAHIITDQIIGAQSRWSSLYLGSLQKTENIAR
>Mature_387_residues
GSISIWAATRPRRPRPALEGDLRVDVVIVGAGITGLTAALLLAKTARSVAAIEARAVGAGDSGGSTGNLYQTVTGGLETL
AAKCEADTARAVVASRGEAIAWIEQQAQAMGPSSGFRRCPMYQYPLSPDAEPTILGELKALRAAGLDAQLASEMPPGLPA
AKGAVLLLSAQAQFHPIGYLHALALQAEHAGARLFENSPALELDLEVGVVRTRTGTAFGHHIVLATHSPLGFHLVQAGMA
VRREYGLAFHEQAVPAGIFWAQAHPRLSVRGLEANGKHYLLCIGEHHETGRHDAAAALSQLERAAQEYLAVGSPVQRWSA
QHFHSPDGLPYIGRDESGAFIATGFSTDGLVYGTVAAHIITDQIIGAQSRWSSLYLGSLQKTENIAR

Specific function: Unknown

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR017941
- InterPro:   IPR005805 [H]

Pfam domain/function: PF01266 DAO; PF00355 Rieske [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 40928; Mature: 40797

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSISIWAATRPRRPRPALEGDLRVDVVIVGAGITGLTAALLLAKTARSVAAIEARAVGA
CCCEEEEEECCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHEEECC
GDSGGSTGNLYQTVTGGLETLAAKCEADTARAVVASRGEAIAWIEQQAQAMGPSSGFRRC
CCCCCCCCCCHHHHHCCHHHHHHHCCCCHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCC
PMYQYPLSPDAEPTILGELKALRAAGLDAQLASEMPPGLPAAKGAVLLLSAQAQFHPIGY
CCEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHH
LHALALQAEHAGARLFENSPALELDLEVGVVRTRTGTAFGHHIVLATHSPLGFHLVQAGM
HHHHHHHHHHCCCEEECCCCCEEEEEEEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHH
AVRREYGLAFHEQAVPAGIFWAQAHPRLSVRGLEANGKHYLLCIGEHHETGRHDAAAALS
HHHHHHCCHHHHCCCCCEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHH
QLERAAQEYLAVGSPVQRWSAQHFHSPDGLPYIGRDESGAFIATGFSTDGLVYGTVAAHI
HHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCEEEHHHHHHH
ITDQIIGAQSRWSSLYLGSLQKTENIAR
HHHHHHCCHHHHHHHHHCCHHHHHHCCC
>Mature Secondary Structure 
GSISIWAATRPRRPRPALEGDLRVDVVIVGAGITGLTAALLLAKTARSVAAIEARAVGA
CCEEEEEECCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHEEECC
GDSGGSTGNLYQTVTGGLETLAAKCEADTARAVVASRGEAIAWIEQQAQAMGPSSGFRRC
CCCCCCCCCCHHHHHCCHHHHHHHCCCCHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCC
PMYQYPLSPDAEPTILGELKALRAAGLDAQLASEMPPGLPAAKGAVLLLSAQAQFHPIGY
CCEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHH
LHALALQAEHAGARLFENSPALELDLEVGVVRTRTGTAFGHHIVLATHSPLGFHLVQAGM
HHHHHHHHHHCCCEEECCCCCEEEEEEEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHH
AVRREYGLAFHEQAVPAGIFWAQAHPRLSVRGLEANGKHYLLCIGEHHETGRHDAAAALS
HHHHHHCCHHHHCCCCCEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHH
QLERAAQEYLAVGSPVQRWSAQHFHSPDGLPYIGRDESGAFIATGFSTDGLVYGTVAAHI
HHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCEEEHHHHHHH
ITDQIIGAQSRWSSLYLGSLQKTENIAR
HHHHHHCCHHHHHHHHHCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]