Definition Ralstonia pickettii 12J chromosome chromosome 1, complete sequence.
Accession NC_010682
Length 3,942,557

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The map label for this gene is 187928705

Identifier: 187928705

GI number: 187928705

Start: 1705597

End: 1706520

Strand: Direct

Name: 187928705

Synonym: Rpic_1622

Alternate gene names: NA

Gene position: 1705597-1706520 (Clockwise)

Preceding gene: 187928704

Following gene: 187928706

Centisome position: 43.26

GC content: 60.17

Gene sequence:

>924_bases
ATGAACATCCTCAACGTTCACGAGCGTGTCATGCTCGCATCCCTTGGCATCTCCGTTTGGCGCGCACGTCGCTTCGATAC
CCGCGCCACGGAAGAGGTGGAAAAGAACCACGCCACCAAAGACATCGGGCGCTTCAACAAGAAGCTCCTGACCGACGATG
CCATTTCTTACAAGAGCGTGTGCAGCATCGCCACGCAAGCACGTGCCTTCTTCAATGCGCACACCCTCGAATACGACCAG
CTTGGCGTGCGTTTGCTGCCCACGGCTGTTTACCTAAAGGTCGCTGACCGGCTGCGCGAGTTTCAAGACGAGTTCCGTGA
AGCCACGTCAGCCTTTCTCGCCGAATACCCAGCGTTGAAGGAGCAGGCCAAGGGTGCTCTCAACGGGCTCTATACCGAGG
CGGACTACCCGACCCTCGAAGCGCTGTCGACCAAGTTCGGTATACGCCTGTCTCCCTTGCCGTTTCCGGACGCAAGCCAG
TTCGGCATCAACTTGCCGGCCAACGTGCTGGACGGCATCAAGGCGGATATGGACGAGCGGGTGTTCAGCGCGGTCAAGAC
GGCCAACGAAGACATCGTCGGCCGCCTCTACGACGCTGTGCAGCACTTCGCCAACCGTCTGTACGCGGGACGCAACGTCC
GGCTGGGCGTTGTCGACAAGGTGCGCGAACTGTGTGACCTGCTTCCGACGTTGAACTTCACACAGGATCCGGCATTGACG
GACATCCTGAACGAGACGCGCAATCACCTGGCTTGCTACACGGGCGCCGAATTGAAGGATTCGGCCGATCTTCGCCAGAA
GGTGGCGGAGAAGGCGATGGAGATCGAGGCGCAGATGGCGGTGTACATGACCGGCGCGCTCAGCACGCCGGCAGCACCGG
CACTTGGCGATTCGTCTGCGCTCAGTTTCCTCCTTGCCTCGTGA

Upstream 100 bases:

>100_bases
GGTGCCGCGATGGACGGCCGGTAAACCGGTTCCCTTTCAAGCAGTACATCCCATGCGGCGAGCTTTGGCTCGCCGCTTTT
CATTTCAAGAGGCTATTTCC

Downstream 100 bases:

>100_bases
GGTGTGGCCATGCTCGAACGGATCATCAAGCAGCGTGGTCAACTGGTGCTGAACCACCCTTTCTTCGGGGCGCTGGCGCT
TCGTCTGAAGCCTGTCGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MNILNVHERVMLASLGISVWRARRFDTRATEEVEKNHATKDIGRFNKKLLTDDAISYKSVCSIATQARAFFNAHTLEYDQ
LGVRLLPTAVYLKVADRLREFQDEFREATSAFLAEYPALKEQAKGALNGLYTEADYPTLEALSTKFGIRLSPLPFPDASQ
FGINLPANVLDGIKADMDERVFSAVKTANEDIVGRLYDAVQHFANRLYAGRNVRLGVVDKVRELCDLLPTLNFTQDPALT
DILNETRNHLACYTGAELKDSADLRQKVAEKAMEIEAQMAVYMTGALSTPAAPALGDSSALSFLLAS

Sequences:

>Translated_307_residues
MNILNVHERVMLASLGISVWRARRFDTRATEEVEKNHATKDIGRFNKKLLTDDAISYKSVCSIATQARAFFNAHTLEYDQ
LGVRLLPTAVYLKVADRLREFQDEFREATSAFLAEYPALKEQAKGALNGLYTEADYPTLEALSTKFGIRLSPLPFPDASQ
FGINLPANVLDGIKADMDERVFSAVKTANEDIVGRLYDAVQHFANRLYAGRNVRLGVVDKVRELCDLLPTLNFTQDPALT
DILNETRNHLACYTGAELKDSADLRQKVAEKAMEIEAQMAVYMTGALSTPAAPALGDSSALSFLLAS
>Mature_307_residues
MNILNVHERVMLASLGISVWRARRFDTRATEEVEKNHATKDIGRFNKKLLTDDAISYKSVCSIATQARAFFNAHTLEYDQ
LGVRLLPTAVYLKVADRLREFQDEFREATSAFLAEYPALKEQAKGALNGLYTEADYPTLEALSTKFGIRLSPLPFPDASQ
FGINLPANVLDGIKADMDERVFSAVKTANEDIVGRLYDAVQHFANRLYAGRNVRLGVVDKVRELCDLLPTLNFTQDPALT
DILNETRNHLACYTGAELKDSADLRQKVAEKAMEIEAQMAVYMTGALSTPAAPALGDSSALSFLLAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33999; Mature: 33999

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILNVHERVMLASLGISVWRARRFDTRATEEVEKNHATKDIGRFNKKLLTDDAISYKSV
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CSIATQARAFFNAHTLEYDQLGVRLLPTAVYLKVADRLREFQDEFREATSAFLAEYPALK
HHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQAKGALNGLYTEADYPTLEALSTKFGIRLSPLPFPDASQFGINLPANVLDGIKADMDER
HHHHHHHHHCCCCCCCCHHHHHHHHCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
VFSAVKTANEDIVGRLYDAVQHFANRLYAGRNVRLGVVDKVRELCDLLPTLNFTQDPALT
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCCCCHHH
DILNETRNHLACYTGAELKDSADLRQKVAEKAMEIEAQMAVYMTGALSTPAAPALGDSSA
HHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHH
LSFLLAS
HHHHHCC
>Mature Secondary Structure
MNILNVHERVMLASLGISVWRARRFDTRATEEVEKNHATKDIGRFNKKLLTDDAISYKSV
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CSIATQARAFFNAHTLEYDQLGVRLLPTAVYLKVADRLREFQDEFREATSAFLAEYPALK
HHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQAKGALNGLYTEADYPTLEALSTKFGIRLSPLPFPDASQFGINLPANVLDGIKADMDER
HHHHHHHHHCCCCCCCCHHHHHHHHCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
VFSAVKTANEDIVGRLYDAVQHFANRLYAGRNVRLGVVDKVRELCDLLPTLNFTQDPALT
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCCCCHHH
DILNETRNHLACYTGAELKDSADLRQKVAEKAMEIEAQMAVYMTGALSTPAAPALGDSSA
HHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHH
LSFLLAS
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA